Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                ------>MYB46(1)                       <---------ANAC55(2)                    ------>MYB83                       <---------TOE2(3)           <------NtERF2                       ----------->GT1            ------>NtERF2                     --------->AHL20(2)           <------NtERF2   ---------->DOF2           --------->TOE2(3)                     --------->RAP2.6(2)                   <-------------         ------>MYB46(1)                         --------->DEAR3(1)         <-------TEIL    ---------      --------->MYB46(3)                        --------->ATERF1(1)      ----------->GT1   ------->TEIL -->ZAT6 ------>MYB83<---------AHL20(2)         <---------RAP2.6(2)--------->DAG2     <---------ANAC58 ---GT1 ----------->RAV1(1)                <---------ICU4   ----------------->AGL3    <---------ANAC46 >MYB52(1) --------->TOE1(3)       <---------ARR11(3)       --------->MYB46(3)        <---------ANAC58   tagagagaaccaacattaactaattaagtataaactaggtcttacttatggccgcccatagacccactaaaagtgaggttcaaatggagcttgtacgtat  6267900                                                                             <-------GAMYB                                                                            <------MYB83                                                                            <------MYB46(1)         <---------ARR14(2)                                                 ----------->GT1         --------->ARR14(2)                                                <---------MYB46(3)    <---------ATHB12                                                   <-----------RAV1(1)     ------  --------->WOX13(1)    --------->ANAC58                               <---------AtMYB61       ------ --AtSPL3<---------ARR11(3)      --------->AHL20(1)       ----------->GT1 <---------ANAC46     ------ >ANAC55(2)             --------->ANAC58           <------ZmHOX2a(1)<----------DOF2  --------->YAB1   gcataaatcaatatccgactaagaccaaggaaacatatattaaaaacgttacaggaaaaattgttaaatacttttggtgggttacacttataagaccaag  6268000              <----------DOF2           <---------ARR14(2)           --------->ARR14(2)          <---------ARR14(1)          <---------CCA1(2)          <---------GLK1(2)                                          --------->At4g35610--------->LBD16        ------->GAMYB                 --------->ANAC46           -------->P  ---------->DOF2     --------->MYB52(1)               --------->ANAC55(2)       --------->WOX13(1)    <---------LBD16    --------->MYB46(3)               ------->TEIL              <---------WRKY38(1)  -------->P    ---    <---------ATHB12             ------->MYC3           <-----------GT1 <-------TEIL------>MYB46(1) --->ANAC58<---------ARR11(1)    <-------MYC3   ------->TEIL   <---------WRKY12     ------>MYB83<---- --->ANAC58--------->GLK1(2)     <-------MYC2--------->ANAC58 --------->WRKY18(1) --------->DEAR3(1) --->ANAC46------->TEIL          ------->MYC2--------->ANAC58<-----------HVH21   --------->MYB46(3)   aaaccaataaccgaatctttatttcaaatggagcatgtgtacgtagcacgaacttattgaaccagtcaaccagatgcaaaacagccaacccggattaaac  6268100                                                            ------->TEIL                                                  ------->PIF5                                                  ------->MYC2                                                  <-------MYC4                                                  <-------PIF5                                                  <-------MYC2                                                  ------->MYC3                                                  ------->MYC4                                                  <-------MYC3                                                  <-------PIF4                                                  ------->PIF4                                                 <---------ANAC55(2)                                                 <---------bZIP60(2)                                                 --------->TGA1a                                                 <---------O2                                                 --------->O2                                                 <---------TGA1a                                                 --------->ANAC55(2)                                                ------------>OsbHLH66                                             --------->ANAC58                ------>NtERF2     ------         <----------DOF2                     --------->ANAC58 --------->TOE2(3)               -------         ==================================================bZIP_DOF          <---------RAP2.6(3)       --------->At4g35610              <----------ID1  --------------->AtSPL8               ------>MYB83 ------>LBD16                       =======================bZIP_DOF      --------->AtLEC2    ------>MYB46(1) -----LBD16                         ---------->DOF2--------->ALFIN1    <---------AtLEC2 <-----------GT1   cggaacatgagcttcacggttttatcttatctaaaactcaaaggaacaagcacgtggctctgtacctcagtctgcatgcagccatgttgttcaccatcca  6268200                                 <---------ARR11(3)                                 <---------AHL20(1)                    <---------ALFIN1     --------->ARR14(2)                    ----------->RAV1(1)  <---------GLK1(2)                  ----------->RAV1(1)    <---------ARR14(2)                  --------->DEAR3(1)  --------->YAB1                 --------->ANAC46--------->ARR11(3)                 --------->PCF2  <---------ICU4                ------>NtERF2    --------->AHL20(1)            <---------ARR14(2)--------->YAB1            --------->GLK1(2) <---------AHL20(2)      --------->TOE2(3)     --------->AHL20(2)                                           <---------CCA1(2)     --------->ANAC58       <---------YAB1                                 <-----------GT1     --------->ANAC46       <---------AHL20(2)                           <---------AHL20(2)     --------->ANAC58      --------->TOE2(3) <---------------AGL15   <---------AHL20(2)  ------>ZmHOX2a(1) --->WOX13(1)  --------->ANAC46<---------TOE2(3)    ----------->GT1 <---------AHL20(2)*TSS        <<< -->MYB46(3)--------->ARR14(2)--------->AHL20(2)  ---------->DOF2   --------->AHL20(2)------>ZmHOX2a(1)   tcactatacgtcaaaatccgccccacaaatattaatattttcatattctcaacaaagaaaaaaactccattttaatttaactgcattcctcctatctttc  6268300                                                                                                 ----                                                                                                -----                                                                                               ------                                                                                               <-----                                                                                               ------                                                                                               ------                                                                                              <------                                                                                              <------                                                                                              <------                                                                                              ------>NtERF2                                                                                             <-------                                                                                             <-------                                                                                             <-------                                                                                             <-------                                                                                             <-------                                                                                            <------NtERF2                                                                                            ---------                                                                                            ---------                                                                                           <---------ATERF1(1)                                                                                           <---------ERF1                                                               <---------ARR11(3)          <---------RAP2.3(1)                                                               <---------AGP1             --------->ALFIN1                                                               --------->ARR11(3)         <---------RAP2.3(3)                                                               <---------ARR14(2)         <---------DEAR3(1)                                         ---------->DOF2       --------->ARR14(2)    ----------->RAV1(2)                        --------->ARR11(3)                   <---------MYB46(3) --------------------- <<<<<<TBF1             <---------ARR11(3)        ----------->GT1------>ZmHOX2a(2)  ------->TEIL-----   ttcttcgtttctatagcctcactaaacatctcttgttattttcgaaagtgaagagaaaaatggtggatctattgaactcggtgatgaacctggtggcgcc  6268400  ----------->HVH21  --------->DEAR3(1)  --------->MYB46(3) <---------At4g35610 -->NtERF2 ---->RAP2.3(3) --->RAP2.3(1) -NtERF2 --->ERF1 --->ATERF1(1) ---RAP2.3(1) ---ATERF1(1) ---RRTF1(1) --ANAC58 --RAP2.3(2) --PCF2 --ANAC58                 <---------AtLEC2                       <---------ANAC58 --ANAC46                 <---------ANAC58                       <---------ANAC58           <-------- >ATERF1(1) <---------MYB46(3)                              --------->SPL7           ------>NtERF2 >RAP2.3(1)--------->ALFIN1                                --------->MYB52(1)       --------->DEAR3(1) -->TaNAC69(2)            <---------ANAC58         <---------GLK1(2) --------->REM1(1)<------NtERF2 ---->DEAR3(1)        <----------DOF2     <----------DOF2 <---------SPL7            <---------ALFIN1   tccagcgaccatggtggtgatggcctttgcatggccattactgtctttcattagcttctccgaacgggcttacaactcttatttcgccaccgaaaatatg  6268500                              <---------At4g35610                              --------->At4g35610                           <-------TEIL                          <----------DOF2                        --------->At4g35610                                                   <------                        <---------At4g35610                                                <---------AHL20(2)                        --------->ZAT2                   <---------TOE2(3)             <---------AHL20(2)    --------->DAG2     --------->ARR14(2)   ----------->GT1--------->YAB1              --------->AHL20(2)   ---------->DOF2     <---------ARR14(2)  --------------->AtSPL3              ------>ZmHOX2a(1) --------->ARR11(3)  --------->LBD16       <---------------AtSPL3            ----------->RAV1(2)   <- -ARR14(2)         <---------LBD16         <---------------AtSPL8      <-----------GT1<---------AHL20(2)   gaagataaagtagttgtcatcaccggagcttcatcggccattggagaggtactaaaattaagaataaaactacttactctcctgcaaaattattttcttt  6268600                                                        ----------->GT1                                                      <----------DOF2                                                     <---------ANAC58                                                     <---------ANAC58                                                <-----------RAV1(1)                                                --------->ALFIN1        <---------ICU4  <---------YAB1          <---------REM1(1)       --------->AHL20(2)                 --------->AHL20(1)         <---------ICU4 ----DOF2             ----------->GT1     --------->ARR11(3)      --------->TOE2(3) ----------GT1------>ZmHOX2a(1)          --------->AHL20(2) --------->AHL20(2)             --------->ARR11(3)   aaaaccatattaattcctacaaaatggttattgtattttcaaaatatatggtgttgctttgttaaaattcttaattacaaacaaatcgatgaataacttg  6268700                                                          <---------TOE1(2)                                                       --------->YAB1            --------->YAB1                                                      <------ZmHOX2a(2)   <---------YAB1            <                             <---------YAB1           <---------ATHB12 --------->GLK1(2)            <                        <------MYB83  <-----------RAV1(1) <---------TOE2(2)     <---------YAB1      <     --------->ARR14(2) <------MYB46(1)      ---------->DOF2    <---------ANAC55(2)        ----------     <---------ARR14(2) ----------->GT1   <-----------HVH21     --------->ANAC55(2)<---------YAB1   <   gttagcaaatatgtttttggagagggaggtcataatacatatgttgtcaaaggccgatcataggttaagtgagattatgtttatcatgagtttctcaatt  6268800  Previous    Next  AGI:  At4g10020.1    Description:  ATHSD5 (HYDROXYSTEROID DEHYDROGENASE 5); oxidoreductase. similar to ATHSD1 (HYDROXYSTEROID DEHYDROGENASE 1), oxidoreductase [Arabidopsis thaliana] (TAIR:AT5G50600.1); similar to short-chain dehydrogenase/reductase (SDR) family protein [Arabidopsis thaliana] (TAIR:AT5G50700.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO16309.1); contains InterPro domain Glucose/ribitol dehydrogenase; (InterPro:IPR002347); contains InterPro domain Short-chain dehydrogenase/reductase SDR; (InterPro:IPR002198); contains InterPro domain NAD(P)-binding; (InterPro:IPR016040) Range:  from: 6268286    to: 6270431    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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