Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                --------->ANAC55(1)                                              --------->ANAC58                                              --------->ANAC58                                              --------->ANAC46                                           <---------REM1(2)                                           <---------ZAT14                                           --------->ZAT14                                         --------->ZAT14                                         <---------ZAT14                                   ------>NtERF2                                  --------->LBD16                                 <---------LBD16                                 --------->LBD16                                <---------LBD16                              <------ZmHOX2a(2)                             <---------ARR14(2)                             --------->ARR14(2)                             --------->ARR11(3)                             <---------ARR11(3)  <---------ICU4             --------->ARR14(3)  --------->ATHB12           <---------ARR14(3)                                      ----------->RAV1(1) -->HVH21        <---------At5g28300   --------------->AtSPL8                ---------->DOF2 >RAV1(2)       <-----------GT1------>ZmHOX2a(2)    <---------ZAT6      ----------->GT1            --   ttcttcattgctaccattttaccggtctcaagatcccgggctctgtacacgctactgtaagtcccttgtccaatctgttaaaagagacaacacaatagaa  6265800                                                                                                    <                                                                                                   --                                                                                                 ----                     --------->YAB1                                                              ----            --------->ANAC58                                                                     ----            --------->ANAC58                                                                    -----          --------->YAB1                                                                        -----         <---------ATHB12                              <----------DOF2                        -------        --------->ANAC58         ---------->DOF2  <---------MYB52(2)                         --------        --------->ANAC58   ----------->GT1        <---------MYB59      ---------->DOF2       --------       --------->WOX13(1)  --------->YAB1      <------ZmHOX2a(1)<---------GLK1(2)          <---------PCF2  ---------->DOF2   --------->AHL20(2)       <---------TOE2(3) <---------At4g35610    <---------ANAC46 ------->TOE2(3)  --------->TOE2(3)          --------->ANAC46  <---------ZAT2   <---------ZAT2<------   acgttatagcaatcaagaaacattaaaaatagtaacaaagagagtataaggaactaactttgtccagcttctcaaaagactctgctcgtcgtggaaccca  6265900 ----------DOF2      ------->GAMYB ------->TOE2(3)  ----------->RAV1(1) ---->P <---------ANAC58 -->MYB83      --------->ANAC46 -->MYB46(1) <---------At4g35610 ->MYB46(1)  --------->At4g35610                                                               <----- ->MYB83<---------ANAC58                      <---------At4g35610        <---------ANAC46   <-------- -->MYB46(3) ----------->RAV1(2)              <---------ZAT2    <------NtERF2               --------- ->ANAC58    =================RAV             --------->At4g35610---------->CDC5           ---------- ->ANAC58  --------->REM1(1)                  --------->ZAT2 ------>NtERF2                 <---------KAN4(2) ---MYB59  <---------ALFIN1  <-----------------AGL1     --------->ZAT2 <----------DOF2<---------ANAC46   acctttgatggcttcacctgcaacagaagttaaccaagaaggccatccagctgcaataagctcggcctcagggctatgtggaacacttgtgggaatatta  6266000                          ------>ZmHOX2a(1)  --------->ZAT2                         <---------ALFIN1    <---------At4g35610                       ------>ZmHOX2a(1)     --------->At4g35610        <------MYB83                      <---------ALFIN1       <-------GAMYB              <------MYB46(1)                --------->ARR14(2)    --------->ARR11(3)       <---------ALFIN1                   <--   ----------->GT1  ------>ZmHOX2a(1) <---------ARR11(3)    ----------->HVH21                    ---- ------GT1      <---------ARR14(2)    <---------ARR14(2)   <-----------HVH21                   <----- -KAN4(1)--------->AHL20(1)           --------->ARR14(2)  ------>ZmHOX2a(1)                   <------ >KAN4(1)<---------AHL20(1)  ------>ZmHOX2a(1)          ----------->RAV1(2)                 <-------- >TaMYB80--------->ARR11(3)----------->RAV1(2)<---------MYB52(1)      <--------P       <---------At5g28300   ctcggtggaaaaatattgaatcctcctcctcctgttccaatatctgcagttggccatctcctgtgacaccttgtaggtctctctacaattactgttttac  6266100                         <<<<<<<<<GATA-3                         <<<<<<<<<GATA-2                         <<<<<<<<<GATA-4                         <<<<<<<<<GATA-1                       --------->WOX13(1)      --------->YAB1 <---------ATHB12       <------MYB46(1)                 ----------->RAV1(1) ---------TGA1     --------->WOX13(1)       <---------MYB46(3)         <---------ANAC58 ----->ANAC46     --------->MYB46(3)        <------MYB83               <---------ANAC58 ----At5g28300   <---------KAN4(2)         <---------AtMYB61       <----------DOF2 -----GT1      <------ZmHOX2a(1)       <---------ANAC46            <---------DAG2<---------ARR11(3) --DOF2 --------->At4g35610      --------->ZAT6                  --------->At4g35610       --------->MYB52(1)   cgtcactatcatctacaggaacaatcaatccactagctctagcggatggtttatgtgctaaaccatcagctttacgtccaccagagcttccatcaacgga  6266200                                                                                              <------                                          *TSS                                                <------                                      <---------ATHB12                                   <---------MYB46(3)                             <-----------RAV1(2)                                         <------MYB83                  <---------ANAC58   --------->ANAC58                                    <------MYB46(1)                  <---------ANAC46   --------->ANAC58          ------------>CBF      <-----------RAV1(1)                  <---------ANAC58  --------->WOX13(1)       ---------->ID1      <-----------------AGL1               <----------DOF2  <------ZmHOX2a(1)   <------ZmHOX2a(1)   <----------DOF2<--------P   tttatgtgaaaactcatctttcttggaagttacaggagcaatcaattgaactgaggacgttttgttccaattctcttttggtttctcatgttggtcacta  6266300                                                                                                <----             --------->ARR14(2)                                                                 -----         <---------ZAT14                                                                      <------         --------->ZAT14                                                                   <---------YAB1         <---------At4g35610                                                               ------>ZmHOX2a(1)   <<<<<<<<<TBF1                      --------->YAB1                                      --------->TOE2(3) ---MYB52(2) <---------ARR14(2) ------>NtERF2---------->DOF2      <-----------GT1 <---------ARR11(3) ------MYB.PH3(2)<----------DOF2<---------At4g35610     <-----------GT1           <-----------ARR10   acttcttcttctgcagttccttttgagcaaatgcagcccataatactcaaagaccgtttcacgatttttttcgcatcaagaacaaatcttatcctgaatg  6266400                                                                  <-----------GT1                                                              <---------GLK1(2)                                                              --------->ARR11(3)                                                              <---------ARR14(2)                                                            ----------->ARR10         <---------AHL20(2)                         <---------TOE1(2)                ========================HOX2a_HOX2a      --------->YAB1     <---------TOE2(2)                <------ZmHOX2a(2)------>ZmHOX2a(1)  ------>ZmHOX2a(1)     <-----------RAV1(2)       <------ZmHOX2a(1)     ------>ZmHOX2a(1) -----ICU4         <---------GLK1(2)              ===============HOX2a_HOX2a         --------->AHL20(2) ---->ATHB12      <------ZmHOX2a(1)   ---------->DOF2<------ZmHOX2a(1) <---------ALFIN1 ---WOX13(1)   <---------LBD16     --------->At4g35610    =====================HOX2a_HOX2a   attcctaagcataaaactcaggaatctcaggtttattagctaaagacacagaggaggacgatcagattttgctcctcctctaagaaaattaatgcaattc  6266500                                                               <----------DOF2                                                              ===============================HOX2a_HOX2a                                                             <------ZmHOX2a(2)                                                             ================================HOX2a_HOX2a                       <----------DOF2                       <---------RVE1(1)                      ------>ZmHOX2a(2)                     <---------ARR14(2)                     <------ZmHOX2a(2)                      --------->ARR11(3)                    <---------ARR14(2)                      <---------AGP1                    --------->ARR14(2)                      --------->ARR14(2)                    <---------ARR11(3)                      <---------ARR11(3)                    --------->ARR11(3)                      --------->ARR14(3)                >>>>>>>GRF7 --------->ARR11(3)              <---------ARR14(3)               <-----------RAV1(2)                   ===============HOX2a_HOX2a             <-----------HVH21                       ================HOX2a_HOX2a            ----------->HVH21           ====================HOX2a_HOX2a                         <----          --------->ANAC55(2)           ------>ZmHOX2a(2) ----------->ARR10           <------ZmHOX2a(1)          <---------ANAC55(1) ------>ZmHOX2a(2)      <------ZmHOX2a(1)              <---------TOE2(3)          <---------ANAC55(2) ==============================HOX2a_HOX2a --------->TOE1(2) ---------->DOF2          <---------ANAC46  <---------ARR11(3)<---------ATHB12------>ZmHOX2a(2)    --------->YAB1   tcttcaaatgttatgtgtcagggatcttttgatcttatatgatcccaaatgaataggaagaagatcttttaaaacctagaaacaatgaggattaaagact  6266600                                           --------->ICU4                                --------->CCA1(2)                             --------->ANAC58                                      --------->AHL20(2)          ---------->DOF2    --------->ANAC46                              <------ZmHOX2a(1)      <------NtERF2          --------->ANAC58 <---------YAB1           <------ZmHOX2a(1)           <-   <------NtERF2       <---------MYB46(3)<---------At4g35610     --------->At4g35610  ---------->DOF2 ------DOF2           <XXXXXXXXXXXXXXXXXXXXMIR851-5P---------->DOF2 --------->At4g35610     <--------   ttggaggcagagaaaagaagacttgtggttcaagaaacgagagagatgatgagagaaagaactaagaagcagaggaaggagagaattaaaaagactttgg  6266700  Previous    Next  AGI:  At4g10010.1    Description:  protein kinase family protein. similar to protein kinase family protein [Arabidopsis thaliana] (TAIR:AT1G33770.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO16310.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN67625.1); contains InterPro domain Protein kinase, core; (InterPro:IPR000719); contains InterPro domain Protein kinase-like (InterPro:IPR011009); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271) Range:  from: 6263594    to: 6266242    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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