Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                   --------->ANAC46                                                 --------->ANAC58                                         --------->DAG2                                        ---------->DOF2                                   ------->GAMYB --------->ANAC58--------->YAB1                                --------->MYB52(1)              <---------ATHB12       ---------->DOF2                                ----------->RAV1(1)           --------->WOX13(1)   ---------->DOF2                               --------->ANAC46  --------->ANAC55(2)        <---------ICU4   cacaaaaatgaacaatacacacttgatgagaacacaacagcataaagtttcaagtaacaagagccaatcaaaaactcaaaattgcgaaagaaagaagcac  6262800                                                                                       <-----------GT1                                                                                ------>ZmHOX2a(1)                        ----------->GT1               <-----------GT1     <---------At4g35610              --------->ANAC58                       <---------YAB1       --------->At4g35610              --------->ANAC58                     <---------ICU4      --------->At4g35610              --------->ANAC46         --------->GLK1(2)               <---------At4g35610            ---------->DOF2    <----------ID1      <--------HAHB4     <-----------RAV1(1)          <----------DOF2    ---------->DOF2      <---------YAB1<---------GLK1(1)  <----------DOF2   ttacagagaaaactttaagcaatggacagagaaaagacaagaagctagatgtattattactgctcgatttctgtgctgcttcctcctttttaccttctga  6262900                                                                                                  ---                                   --------->ANAC58                                             -----                                   --------->ANAC58                                          <-------                                  ------->TEIL                  --------->HSFB2a(2)          <-------                              <---------HSFB2a(2)               <---------HSFB2a(2)        --------->MYB52(1)               --------->DAG2 --------->HSFB2a(2)    <---------ARR11(3)   --------->YAB1  -----------              ---------->DOF2<---------ANAC46      --------->LBD16  --------->GLK1(2)     -----------     >>>>>>>>>>GATA-1     <----------DOF2     <---------MYB52(1)--------->HSFC1(1)------->TEIL  <----   gttactcgatttcacataaagtcttctcctttcgcgaacccaattcccgttccctgatattctcttcgagaatcgattagaatgaaccatggatgacgga  6263000                                 --------->MYB52(1) ------>DEAR3(2)                ------->GAMYB ---->ARR14(2)                  <---------ALFIN1 --ANAC46                       --------->AtMYB61                              --------->TOE1(3) --ANAC55(2)                   --------->MYB46(3)                 --------->ARR14(2) >HVH21   <-------GAMYB        <---------MYB55(2)                 <---------GLK1(2) >TGA1<-----------HVH21      --------->WOX13(1)         --------->YAB1         --------->TOE2(3) -----ARR14(2)   <------NtERF2-------->P             ------>ZmHOX2a(1)      --------->GLK1(1)    ----   aacgacgcagtcggatggcagagactgctatcaaccaccgaaattgacattgttcctatcaaaaactggattctacagaaaccctaattcgatatcgaag  6263100                                                   --------->ANAC58                                            <---------ANAC58                                       <-------GAMYB *TSS                          --------->WOX13(1)                            ---------->DOF2 <---------ANAC58     <---------ETT(2)------------>CBF                          --------->HSFB2a(2)      --------->ANAC58        --------->HSFB2a(2)     <---------KAN4(2)    <---------HSFB2a(2)  <---------WRKY18(1)         <---------HSFB2a(2) <----- ------>DOF2       ---------->DOF2    <---------MYB46(3)         <---------WRKY38(1)          <------   aaaggagaacaatcgattcaccaaagttccaaaagtttggcgcttggcttgactcgaaacaacacagtcgacgagttctcgatgtcaatgacatatttac  6263200                 <-------TEIL                --------->CCA1(2)             --------->ANAC58    --------->GLK1(1)    <---------GLK1(1)   --------->ARR11(3)                              --------->ANAC55(1)   <---------ARR14(2)                              ----------->GT1   <---------ARR11(3)          <---------MYB52(1)  --------->ANAC55(2)   --------->ARR14(2)         <-------GAMYB        <---------ANAC55(2)   <---------GLK1(2)      ------------>MYB.PH3(1)  --------->ANAC46 ----------->ARR10     ---------->DOF2    ----------->GT1       ------>ZmHOX2a(1) ----At5g28300 <---------ARR11(3)  ---------->DOF2 --------->ANAC58                         <-------- -----GT1    --------->ANAC58----------->GT1       --------->ANAC58 <<<<<<<<<TBF1        <-----------GT1   cctcagatattcgacaagatacaaataaagtccgttataaagaagggcaaaacacgtaaatatgtccttcttcttctctctcacaatagtttcactttct  6263300                                                 <---------ANAC58                                                 <---------ANAC46                                        <---------MYB52(1)                 <------NtERF2                                       <-------GAMYB          --------------->AGL15                                 <---------MYB46(3)          <---------ANAC58                                 --------->HSFB2a(1)         <-----------------AGL3                                 --------->HSFC1(2)          <-----------------AGL2                                 <---------HSFC1(2)          <---------ANAC58                                <---------TOE1(2)<---------ANAC58       --------->ATERF1(1)<---------TOE2(3) --DOF2             <----------DOF2   <-----------RAV1(1)  --------->ARR11(3)       <-------GAMYB   tcagtccccattcgagtttgaactttagttttcgatggttctgttggctcttcgtgtgaaatttcttgttttgggtcgccttcttcggttatagaggtag  6263400                                                                            <---------YAB1                                                                         <----------DOF2                      --------->TOE1(3)                                 <---------ANAC58                      --------->TOE2(3)                                 <---------ANAC46                      <----------DOF2                                   <---------ANAC58    ---------                    ------>NtERF2                                  <-----------RAV1(1)    <---------ANAC58          --------->ANAC46               ----------->HVH21    --------->ANAC46            <---------ANAC46          --------->ETT(2)  ----------->GT1                   --------->ANAC58            <---------ANAC58          <---------bZIP60(1)          <----------DOF2        --------->ANAC58         <---------MYB52(1)          --------->bZIP60(1)----------->GT1           --------------->AtSPL8  <---------WOX13(1)   <    XXXXXXXXXXXXXXXXXXXX>MIR172C/D    --------->TOE2(3)<---------------AtSPL8--------->ATHB12  <-----   tgaagaatattgacgacattgcagccttaagggttaaaaacctttgatgggttttattatgtacaagacatgttgcttttgattgatcacttaggtgtgt  6263500                                                  <---------HSFC1(2)                                                  --------->HSFC1(2)                                                  --------->HSFB2a(1)                       <---------ANAC46           <---------HSFB2a(1)                   <---------ANAC58              --------->GLK1(2)     <---------At4g35610                         --------->ARR14(2)  <---------MYB52(1)<----------DOF2              --------->ARR11(3) >ALFIN1           <---------ANAC46             <---------GLK1(2) ---------ZAT6     <---------ANAC58         <---------ZAT14 <-------TEIL              --------->ATHB12 ------HVH21<---------AHL20(2)  <---------TOE2(3)<---------ARR14(2)                  <---------YAB1   cactgttagcttatttagttggcttgtttgtatagaggttaatgactgtagaatcttctagctacatattaagttgcacaactaaacacgattgctaaat  6263600                                                                                             ------>ZmHOX2a(2)                                                                                            <------ZmHOX2a(2)                                                                                           <---------                                                                                           --------->ARR14(2)                                                                                           <---------ARR11(3)                                --------->ICU4                                             <---------ARR14(2)                          ------->MYC3                                  --------->ARR14(2) --------->AGP1                 ------>ZmHOX2a(1)                                    --------->ANAC58     <---------AGP1                --------->TOE2(3)    <-----------HVH21                --------->ANAC58     --------->ARR11(3)         <-----------GT1  <-------MYC3      ----------->GT1     --------->AtLEC2      --------->MYB52(1)   atgcacacttgtttccttcctcaaaccacatgtaatgctggtcagacagagaaaactgaaatttccatgtacaagaaccacatagtactaacagatctta  6263700  Previous    Next  AGI:  At4g10000.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G03880.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO16313.1); contains InterPro domain Thioredoxin-like fold (InterPro:IPR012336); contains InterPro domain Thioredoxin fold (InterPro:IPR012335) Range:  from: 6260466    to: 6263153    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At4g10010.1    Description:  protein kinase family protein. similar to protein kinase family protein [Arabidopsis thaliana] (TAIR:AT1G33770.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO16310.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN67625.1); contains InterPro domain Protein kinase, core; (InterPro:IPR000719); contains InterPro domain Protein kinase-like (InterPro:IPR011009); contains InterPro domain Serine/threonine protein kinase, active site; (InterPro:IPR008271) Range:  from: 6263594    to: 6266242    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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