Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100      <---------ANAC58                                      <------MYB83    <---------ANAC58      --------->ANAC58            <-----------RAV1(1) --------REM1(1)          --------->ANAC58           --------->ARR11(3) --------->ANAC58 ------->ALFIN1 <---------ANAC55(2)   <---------AHL20(2)  <------MYB46(1)           <---------AHL20(2) ---->DAG2      --------->ANAC55(2)   --------->AHL20(2)  <---------MYB46(3)        --------->AHL20(2) ---->DOF2      <---------ANAC46      --------->AHL20(1)  ----------->GT1   ---------->DOF2 >AHL20(2) --------->ANAC46        --------->YAB1 --------->AHL20(2)    --------->ANAC58  -----------   agtgtagcttaacacactacgtatgggaacgaaactaaaataaaataagaaataatatgttggtgaaaaaaatcaagaaaaagaatttaaatcagtaaaa  6255100                                                                                   <------MYB46(1)                                                                                   <------MYB83                                                                                   --------->MYB52(2)                                                                                   <---------MYB46(3)                                 --------->YAB1                                   <---------AtMYB61                          --------->AHL20(2)                                     <--------P        <-              --------->YAB1    <---------YAB1                       <---------ALFIN1     ------>ZmHOX2a(1) >GT1        <---------ATHB51 --------->YAB1         <-----------HVH21          <-------GAMYB  <-----   tcaatttctaatacaataataaacacaaatatttataatgaaatgaccaaagttttgtcagagaaacacacacacatttgagggttggtttcctagtcta  6255200                                                                                         -------->HAHB4                                                                                         --------->YAB1                                                                                        --------->ICU4                                                                                      --------->YAB1                                                                                      <---------ICU4                                                                                     --------->ICU4                                                                                     <---------ATHB51                                                                                     <---------AHL20(2)                                                                                   --------->YAB1                                                                             ----------->GT1                                                                            <---------TOE2(3)   --------->At4g35610                               --------->ANAC46     ---------->DOF2<---------ICU4   <---------At4g35610                         --------->At4g35610      <---------At4g35610      ---- --------REM1(1)        --------->YAB1    ---------->DOF2               --------->At4g35610<---------YAB1 ----YAB1      --------->HSFB2a(2)     <---------AHL20(2)          <---------GLK1(1) --------->AHL20(2)   attgtagctcaatttttctaggtctattatgaagtttctatataaaaagagctaaacccaatactatggaattcagcaaaggtaaaaataattatgacac  6255300                                                                                                  <--                                                                                             --------                                                                                            ---------                                                                                            <--------                                                                                        --------->AHL20(2)                                                                                        <---------AHL20(2)                                                                                   <---------AHL20(2)                                                                <---------HSFB2a(2)<---------AHL20(1)                                      --------->AHL20(2)        --------->HSFB2a(2)--------->AHL20(2)        ----------->RAV1(1)<---------ANAC46                  <---------DAG2        --------->ARR11(3)       --------->ANAC46    <---------ANAC58                  <----------DOF2       <---------ARR11(3) ------>DOF2               <---------ANAC58             <-----------GT1            --------->AHL20(1)   aaagtctatacaacatagttgaattgatagcttgaagaaataatatggtattcaagtttatcacttttagaacgactacatgtaatatattaaaatgatt  6255400     ------->TEIL  --------->YAB1    ----------->GT1             <---------ICU4 -------YAB1     <-----------HVH21 <---------ARR11(3)            --------->ATHB12 >HAHB4          ------>MYB83      --------->ARR11(3)           --------->ICU4                     <- >ICU4           ------>MYB46(1) <---------YAB1     ----------->GT1                        <--------- -YAB1  <-----------GT1     ----------->GT1       <---------DOF5.7(2)                ---------->DOF2   ctaaatgaatttacatacctatcacaagaatggtgaagatagttagaacagtaaacgtgaatagaaatgatttcttcatcttcgaaataaagagattgta  6255500                                   --------->ANAC58                                   --------->ANAC55(2)                                   ----------->GT1                                   <---------ANAC55(2)                                   --------->ANAC58                                    ------>MYB46(1)                                   --------->ANAC46      ------->TEIL               <---------At4g35610                                  ------->TEIL          <---------CCA1(2)           --------->At4g35610                              <---------------AtSPL8<---------ANAC58                <---------ANAC58                              <---------------AtSPL3<---------ANAC58              <-----------GT1          --------->AHL20(2)  --------------->AtSPL8<---------ANAC46   --------->YAB1  ------>MYB83  ---------->DOF2           --------->DAG2          <---------AtLEC2  <---------YAB1<---------ANAC58- --------AHL20(2)    ---------->DOF2            <------------CBF    --------------->AGL15          -- ---CBF ----------->GT1    ---------->DOF2     <---------ICU4       <---------------AGL15          <-   ttttaaaagtaagttaatagacagaaagaaaaagtgtacgtaaatataagaattgcatgtatcccatattctattataagctagttacctgcctaaattc  6255600                                                          --------->AHL20(2)                                                          <---------AHL20(2)                                                      <---------AHL20(2)                                                      --------->AHL20(2)                                                    <<<<<<<<<MYB98         --------->GLK1(2)                         ----------->GT1 -------->CCA1(2)            <---------TOE1(3)    ----------->GT1            <------ZmHOX2a(1) ------->ARR11(3)            <---------TOE2(3)   <---------TOE2(2) ---------->DOF2 --------ARR14(2)    ------------>CBF      <---------At4g35610 ----------->GT1          <---------ICU4   agatatagaagaatgtggtcttacacaatttcaggttttttgctcatctcatatgttaaattaaacagttaaagccttaggactcgctcatcttgacatc  6255700             <---------ARR14(2)             --------->ARR14(2)         <------ZmHOX2a(1)  <-----------TBP                                                                            <-------  --------->AHL20(2)                                                               --------->ATHB12 --------->ARR11(3)                                              <-----------GT1  <---------YAB1 <---------ARR11(3)                                --------->ANAC46               --------->ICU4 <---------AHL20(1)                  <-----------HVH21     <---------YAB1       --------->ANAC55(2)   gaatatatataggaggttaccctctctcacttctccttgtgtcatctctgcatccacaactatcatttaaccagttttacttacatgattagtttctttt  6255800                                                                                        --------->AHL20(2)                                                                           --------->ARR11(3)                                                                      <-------TEIL     <---------AHL20(1)                                                          --------->ANAC46 <---------ARR11(3)     <--                --------->MYB52(1)                        --------->ANAC55(2)          --------->AHL20(1)               ---------->DOF2                           ============================================    ----------->GT1----------->GT1           <----------DOF2 --------->MYB52(1)       <--------------   <------ZmHOX2a(1)                   <-----------GT1   <---------------AGL15        --------------- ---DOF2   <-----------GT1      --------->CCA1(2)        --------------->AGL15<----------DOF2   -----   atagaggagtatataaccaaagggtataacgaatatatgagttactacttttgtattttctcgtaacagaaattcattatcttttgtaatatatatagca  6255900          <---------AHL20(2)     <---------TOE2(3)    --------->AHL20(2)                     --------->YAB1                                <---------AHL20(2)    --------->YAB1                         <---------ICU4                  --------->AHL20(2) --------->TOE2(3)                        <---------AHL20(2)--------->AHL20(2)          --------->AHL20(2) -------ALFIN1                        <---------AHL20(2)    <---------AHL20(2)          <---------AHL20(2) =MADS_MADS                           --------->AHL20(2)   <---------AHL20(2)  <---------AHL20(2) -AGL15--------->AHL20(1)     <---------ATHB12             <---------AHL20(1)  --------->AHL20(2) >AGL15<---------AHL20(1)   --------->WOX13(1)             --------->AHL20(2)  <---------ATHB51 ------>RAV1(1)  <---------YAB1--------->YAB1              --------->AHL20(1)--------->YAB1  --------   acacattaatattttttttatgaaacgagtcaatcaaaatttaaataatcactaaaaccaatttattttttaaaaaaaaaaataattcaaataaatagtt  6256000  Previous    Next  AGI:  At4g09984.1    Description:  LCR34 (Low-molecular-weight cysteine-rich 34). Identical to Putative low-molecular-weight cysteine-rich protein LCR34 precursor (LCR34) [Arabidopsis Thaliana] (GB:P82749); contains InterPro domain S locus-related glycoprotein 1 binding pollen coat (InterPro:IPR010851); contains InterPro domain Knottin; (InterPro:IPR003614) Range:  from: 6254425    to: 6255479    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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