Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                            --------->MYB52(1)                                                  --------->GLK1(2)     <---------MYB52(2)          <                                                 <---------GLK1(2)     --------->ANAC58  --------->ANAC58                 <---------GLK1(2)        <---------ANAC58             --------->ANAC58  --------->ANAC58                <--------ATHB1            <---------ANAC58      ----------->TGA1    =================                --------->YAB1            <---------ANAC46  --------->AHL20(2)      <---------DEAR3(1)               --------->ICU4      ------>ZmHOX2a(2)        <---------AHL20(2)   --------->ATHB12---- -->AGL15      <---------ATHB12  <---------ARR11(3)         --------->AHL20(1) <---------KAN4(2) ---- ---AGL15      <---------YAB1    --------->ARR11(3) ----------->GT1  ---------->DOF2------>ZmHOX2a(2)   tatgaagtatgaacacaatgattctcatgcttcatgatctcgtttcgtagagaatcgcaaaataaaatgacgaaagtaacgaatgatcggcgagcaatac  6245300                     <---------DEAR3(1)         --------->ANAC58    <---------ATHB12         --------->ANAC58  --------->WOX13(1)       <-----------RAV1(2)<------NtERF2      <------ZmHOX2a(2)  <---------ZAT18     --------->ARR14(2)  ------>NtERF2                           <---------MYB52(1)     <---------ARR14(2) --------->ANAC46                      <-------TEIL    =======================HOX2a_HOX2a                     --------->At4g35610    ========================HOX2a_HOX2a                    <---------HSFB2a(1)    <------ZmHOX2a(1)------>ZmHOX2a(2)                     --------->HSFC1(2) ---------ANAC46    <------ZmHOX2a(2)                      --------->HSFB2a(1) ==========HOX2a_HOX2a --------->RAP2.3(1)                 --------->ZAT2 ----->TOE2(2)     --------->ARR14(2)                      <---------HSFC1(2) ----->TOE1(2)     <---------ARR14(2)                    <------ZmHOX2a(1)            --------->GLK1(2)   ctgcgaggatcaggcaagagagatcggcgcaatcagcgagtctagggttttccattgaaggagcttcgttatcaacttcattacagagattccaaacttc  6245400                                                    --------->LBD16                                                  --------->LBD16                                                  <------NtERF2                                                  ------>NtERF2                                                 --------->DEAR3(1)                                                <---------DEAR3(1)                                                --------->ATERF1(1)                       XXXXXXXXXXX                                               ------>NtERF2                            <------ZmHOX2a(1)                                               --------->LBD16                         <------MYB46(1)                                               <---------ATERF1(1)                  <---------MYB52(1)                                       <-----------ARR10                           --------->LBD16                                       --------->ARR11(3)                        <---------LBD16                                       <---------ARR11(3)                  --------->ARR11(3)                                      <---------CCA1(2)                    <---------ARR11(3)--------    <---------GLK1(2)     --------->MYB52(1)  --------->ANAC46          >>>>>>>>>TBF1  <------MYB83  <---------YAB1         ------>ZmHOX2a(1)    --------->DEAR3(1)    <------ZmHOX2a(1)<--------P   taatacgattcttcatccctctgtctcctaacgctgagacatatctctccgccgcgcagttttgaacggaggaagaagaactctccggtaggagaagcag  6245500                                                                                  ----------->GT1                                                                                 --------->ALFIN1                                                                           ----------->HVH21                                                                         <---------ANAC46                                                                         <---------ANAC58                                                                         <------NtERF2                                                                         ============================       ----------->GT1                                                   <---------TGA1a --------->ANAC46                               ----------->HVH21        <---------ANAC58 --------->ANAC58            <------ZmHOX2a(1)<---------ANAC46           ============================ --------->ANAC58  --------->ANAC58     ---------->DOF2                  --------->TGA1a            < XXXXXXXXX>MIR164C --------->ANAC58     ===========================================bZIP_DOF  <------- ->At4g35610      <---------TOE1(2) --------->TOE2(3)                   ------>NtERF2       <--------   agcaagcaagagtgaaatcgcaggcattgaaggagcaaacttaaaagcgcgtgaagttgaaggaatggtataggcgcgtgagagtggagaaattcgcgcg  6245600                                                     <---------DAG2                                               <--------ATHB1                                               --------->ATHB12                ----------->GT1                <---------ICU4             ---------->DOF2           --------->ARR14(2)        ----------->GT1                <---------ARR14(2)        --------->LBD16                --------->GLK1(2)      <---------LBD16                  <---------ARR11(3)  --------->ATHB12                     --------->ARR11(3) --------->AHL20(2)               --------->LBD16<---------WOX13(1) <---------AHL20(2)              <---------HSFC1(1)  <----------DOF2 ==========bZIP_DOF              <---------HSFB2a(2)<---------ANAC58     --------->GLK1(2)       ---- ==========bZIP_DOF   --------->ARR11(3)      --------->ICU4      --------->HSFB2a(2)            <--- ----------DOF2--------->DAG2    --------->HSFB2a(2)<---------ANAC58    <---------GLK1(2)      <----- --ANAC46--------->At5g28300 <----------DOF2  <---------YAB1      <---------HSFB2a(2)   <---------MYB52(1) -LBD16<---------ANAC46<---------REM1(1)     <---------WOX13(1)<----------DOF2      --------------->AGL15   tgatttattgcggtaaaaaggtaagatgtcgcattctggaaaatctgaatgattgcttttctctgcttttggaagaatctcatttactccgtttagtatt  6245700                                                                           <----------DOF2             <---------ALFIN1                                              <---------DAG2           -            <---------REM1(2)                       --------->AHL20(2) <---------MYB52(1)           -            <---------ZAT14                       --------->ANAC55(2) --------->LBD16               -   <-----------GT1                              <-----------GT1      --------->ANAC46              -- ----->AHL20(2)                          ----------->TBP             --------------->AtSPL8       --- ------AHL20(2)        --------->AHL20(2)--------->AHL20(2)         <---------LBD16      --------->ARR11(3) ------TBP  --------->ZAT14              <---------AHL20(2)   --------->YAB1             <---------ARR11(3)   tatatttacatccctacactcttcataaattacaaatagacatataaatttcacttaattacaaacataacccggtactttttcacctagagatattcca  6245800            --------->bZIP60(2)            --------->ANAC58                <---------ANAC58                             <-----------            --------->ANAC58                <---------ANAC46                           <---------ATHB51     ---------->DOF2                        <---------ANAC58                           <---------YAB1 -------->ANAC58                         <---------MYB52(1)               --------->ANAC46 ---------->GT1                  --------->ARR14(2)               <-----------------AGL1--------->ATHB12 -------->ANAC58                 <---------ARR14(2)           --------->At4g35610    --------->TOE2(3) ------->DAG2                    --------->PCF2<---------ZAT14<---------At4g35610   ----------->GT1 ------->DOF2<-----------TGA1   <------ZmHOX2a(1)             --------->ZAT2 ---------->DOF2   <-----   aaaagcaaaaagaaacgtcattttcagaaacagaggaccctctgtttcgttcagtgagtgtttgagctgtctctataggcaaagaaacgataattgggga  6245900                                                                                                 <---                  <---------At4g35610      --------->ANAC46                                     <----                  --------->At4g35610   <---------ZAT18                                     <--------                <---------HSFB2a(2)     --------->ZAT18 <---------ARR11(3)      *TSS   <<<<<<<<<TBF1 -CBF           --------->HSFB2a(2)     <---------WRKY38(1)       --------->ALFIN1<----------DOF2---- ----PCF5 <----------DOF2        <----------DOF2   ------------>CBF            <-----------GT1-------   ccatatgttcttctttttccagatgaagacgaagccttttagtccacgaagaagacaatgtcttctaagtggtggaacattttcctttcttcttctttaa  6246000     --------->ATHB12                                                                            <---    <---------YAB1                                                                               <--- ------ARR11(3)                                                      <---------ATHB12          <----- -----CCA1(2)                <-------TEIL                     --------->WRKY38(1)            -------- --DOF2<---------WOX13(1)  <---------TCP16(1)          <-------TEIL--------->WOX13(1)   ------>ZmHOX2a(1) ----->ARR11(3)        <---------LBD16                --------->ALFIN1                 <---------ALFIN1 -->AHL20(2)    <---------AHL20(2)          ------->TEIL   <---------ANAC46          <---------ATERF1(1)   atctttctgattgcctcttaaattttctgggtccatggcaagtttgcaccttggaggtgcttcgttgatcaatgaggtcgtttttggctcctccttgatt  6246100                                                                                                  ---                                               ---------->DOF2                               <-------                                            --------->ANAC46                               <---------ICU4                                            --------->ANAC58                               -------->ATHB1                                            --------->ANAC58         <----------DOF2       --------->ATHB12                                            --------->AtLEC2         <---------DAG2        --------->ATHB51                                         <-----------------------TaNAC69(2)                -------->HAHB4  --------->HSFB2a(2)                <------MYB83             <---------YAB1               <---------AHL20(2)  <---------HSFB2a(2)                <------MYB46(1)       --------->GLK1(2)              --------->ICU4 ---MYB83 <---------DOF5.7(2)        ----------->GT1      <---------GLK1(2)               <---------ATHB51 ---MYB46(1)       <-----------GT1  --------->MYB59     --------->ICU4                 <---------AHL20(2) ----WOX13(1)----------->GT1        --------->MYB46(2)  ----------->ARR10              --------->AHL20(2) ->ATHB12 --------->MYB52(1)      <---------MYB52(1)--------->ZAT18 --------------->AGL15 <---------YAB1   ggtttcagaagtaaacggtttaaacgagcttcagaggttaggttacaagcaaagtgcaaagattctaattcctttttgagttttttagtttaattattgt  6246200  Previous    Next  AGI:  At4g09965.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G17030.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO16353.1) Range:  from: 6244737    to: 6245683    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At4g09970.1    Description:  unknown protein Range:  from: 6245980    to: 6247765    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version