Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                       <-----------RAV1(2)                                                                                   ------>NtERF2                       ---------->DOF2                                            --------->ANAC58                --------->YAB1                                                    --------->ANAC46               <---------YAB1         <-----------------AGL1                      --------->ANAC58             <---------ICU4           <-----------------AG                      ===================== ---->GAMYB  --------->YAB1        --------->ARR11(3)                           <------ZmHOX2a(1) --->P      --------->ICU4 <------ZmHOX2a(1)                                ---------->DOF2 -->MYB46(3)<---------ATHB12       <---------ARR11(3)   <----------DOF2<-----------GT1   cccaaattagaccaattatcataccaaaaggatgtaagttctccattttggaaaacaactttgcagaattgttttaccaaaaggacgccagacgaattga  6228200                                            --------->AHL20(1)                                            <---------AHL20(1)                                            <---------AHL20(2)                                            --------->AHL20(2)                                           --------->AHL20(2)                                           <---------AHL20(2)                                          <---------YAB1                                        <---------ICU4                                        -------->ATHB1                                        --------->ATHB51                                        --------->YAB1                                        <--------HAHB4                                        <---------AHL20(2)                                        -------->HAHB4                                       <---------YAB1                                       --------->ICU4     <-----------GT1                 ------->TEIL                                       <---------ATHB51<----------DOF2                ---------------               --------->ARR11(3)   <---------YAB1   <---------ZAT18                  <--------------              <---------CCA1(2)   --------->YAB1  <---------ANAC58                  <---------ATHB12          <----------DOF2       <---------WOX13(1)<---------ANAC58           <---------ANAC58   ------>ZmHOX2a(2)   <---------YAB1<---------ICU4  --------->ZAT18         <---------ANAC58 --------->ARR11(3)   <----------DOF2--------->YAB1  <---------ZAT14         <---------ANAC46 =========HOX2a_HOX2a--------->YAB1 --------->ICU4<---------ANAC46         --------->GLK1(2)       --   tgtgatctatttctttatatctatctttatagtgaatgataattattaaattgagtgcattaactactcgataagagtttcttgaaatcatgtacccatt  6228300                                                <------------CBF                   ------->TEIL                                               --------->ATHB12                  <-------TEIL                                               --------->ATHB51                 --------->ANAC58                                               -------->ATHB1                  <-------MYC2                                              <---------YAB1                   <-------MYC3                                            <---------------AGL15              ------->MYC2                                            --------------->AGL15              ------->MYC3                                           <-----------------AGL3           ------->GAMYB           <---------At4g35610 --------->HSFB2a(2)                          <---------ALFIN1 >AtSPL8   --------->At4g35610 <---------HSFB2a(2) <---------MYB46(3)      --------->MYB46(3) -AtSPL8---------->DOF2  <----------DOF2   <-----------------AGL2        <-----------GT1 ------->TOE2(3)  ------>ZmHOX2a(1) ----------->RAV1(1)           --------->YAB1--------->ANAC58 <---   aacttaaatgtaaagctgtcctccttgcattttcgagacaacaaaactattattggttatcgaactaaacatattcaaccacatgcatccatagaaaccg  6228400                                                                                              <------                                           <------NtERF2                                      -------                                 --------->ATHB51                                             <------ZmHOX2a(2)                                 <---------ICU4                                              <-------                              --------->YAB1                                                 <-------                              --------->TOE2(3)                                              --------                              --------->TOE1(3)                                 ----------->GT1------                           <-----------GT1--------->ANAC58              <---------ZAT14  ---------->DOF2 ------MYB52(1)       <----------DOF2     --------->ANAC58     --------->ARR11(3)    --------->GLK1(2)   ttgatattccttcatttttgtattctttttaaccataattttggaggcaacttagtttggaatgagttcttgagaacagagacagaaaatccaaagatct  6228500                                        <---------ALFIN1  <---------CCA1(2)                    <---------ZAT18 ---GLK1(1)                            --------->ZAT18 -->GLK1(1)                      <---------ANAC58                                                 <-- --AGP1  <----------DOF2         <---------ANAC58                                               <---- --ARR11(3)                    <-----------GT1        --------->ALFIN1                    --------->ANAC58 ->ARR11(3)                    <---------AHL20(2)   <---------ANAC46                      --------->ANAC58 >ZmHOX2a(2)           <---------AHL20(2)  <----------DOF2 <------ZmHOX2a(1)  ----------------->AGL1   cttcatatattcttttaatctatattttaaaatttacttggtccactttcaaatgggtggaggactcgtagaagttgatgtccaaactggacaaggtatg  6228600                                                                  <---------RVE1(1)                   ------->TEIL                                   <---------CCA1(1)                   <---------ARR11(1)                            --------->ARR14(2)            ------>ZmHOX2a(2)                                    --------->ARR14(3)           <------ZmHOX2a(2)                   <---------DAG2    <---------ARR11(3)          --------->AGP1                       <----------DOF2   --------->ARR11(3)          <---------AGP1<----------DOF2       <---------ANAC58   <---------ARR14(3)          <---------ARR11(3)                  <---------ANAC58   <---------ARR14(2)          --------->ARR11(3)             --------->ATHB12      ----------->ARR10                -----         <---------CCA1(2)               <---------ICU4  --------->DAG2                  <---------YAB1 ---------GT1     <---------GLK1(2)     <---------YAB1  ---------->DOF2   <---------ARR11(3)   ------ -------HVH21     <---------CCA1(2)--------->YAB1  --------->AtLEC2 --------->GLK1(2)  <----------DOF2   tcacatttcttagatctttcgaatctctttctctcactcatagtcattgctttatgcaaaaagagaagatattctagttcttaatatgacttttatagat  6228700                                                                                                    <                                                                                                  ---                                                                                                <----                                                                                                =====                                                                                             --------                                                                                             <-------                                                                                             <-------                                                                                             --------                                       <---------ANAC58                              --------->ATHB12     ----------->HVH21                 <---------ANAC46                             ------>ZmHOX2a(1)   <----------DOF2                     <---------ANAC58<---------At5g28300          --------->ICU4--- ---->CCA1(2)             <---------MYB52(1)          <-----------GT1               <---------YAB1--- --->ARR11(1) --------->GLK1(2)      <---------YAB1 <----------DOF2   --------->HSFB2a(2)  <---------RAP2.3(3)   ttgggctttgacagagtttctgttttctgttttttgaagatgcttgtgagtctgatttaccgatgaagccttcaagaaccctagtccttattggctgctc  6228800           --------->TOE1(2)    ------->GAMYB                                                     <---------ZAT2 --------->MYB52(1)                                                   --------->ZAT2 ---------WRKY38(1)                                                   --------->At4g35610 ------>ANAC46     --------->ANAC58                                 <-----------RAV1(2) -------RAV1(2)    --------->ANAC58                                --------->At4g35610 ==========================RAV                                     <---------At4g35610 ->At4g35610     <-----------RAV1(2)                           --------->ANAC58                   --- --At4g35610--------->ALFIN1                                   --------->ANAC46                 <---- --ZAT2  --------->DAG2                                        --------->ANAC58              -------- ->ZAT2 ---------->DOF2         ------>ZmHOX2a(1)          <------ZmHOX2a(1)            --------->ZAT18 ------>ANAC58 ----------->RAV1(1)                        <----------ID1<---------MYB46(3)--------->At4g35610 ------>ANAC58----------->HVH21--------->TOE2(3)       ---------->DOF2<---------At4g35610 <---------At4g35610   aggcaacgggaaaagtgcgacagggaatagcatcctcagaagcgaggcattcaagtcaaaaggacaagcagcagctgttaccaaagaatgtgagctaaag  6228900                       --------->YAB1                      =============================HOX2a_HOX2a                      <------ZmHOX2a(2)            ------>MYB46(1)            --------->MYB52(1)                           --------->ALFIN1            ------>MYB83                         <---------ANAC58           --------->MYB55(1)         --------->ZAT6    ------->MYC3          --------->MYB46(3)        <-----------GT1     <-------MYC3          --------->AtMYB61    <---------YAB1    <---------ANAC46          <---------MYB59<---------YAB1          <---------ANAC58         <----------DOF2      <----------ID1 <---------ARR11(3)     <-----------RAV1(1)         XXXXXXXXXXXXXXXXXXXX>MIR837-5P ------>ZAT18        --------->ARR11(3)     ------>ZmHOX2a(1)        --------->At4g35610 -----------AtSPL8  <---------At4g35610   ----------->RAV1(2)        <---------At4g35610 -->DOF2  <---------MYB55(2)<---------TOE2(3)   <-------TEIL        ------->TEIL                 <---   agtactaagcgaccaaacggacagatcataaatgttattgacactcctggtgcgtccatgtgtgtgtttgcatctgcttcttgttcatatcaaactaaat  6229000            ----------->GT1                                                                    ------            <------MYB83                                                                       ------            <------MYB46(1)              <---------MYB46(3)                                    <-----      ------->MYC3          --------->ANAC58                                                   ======      <-------MYC3<-------TEIL  <----------DOF2                               --------->AHL20(2) ---- --------HVH21<---------YAB1--------->ANAC58                                  <---------AHL20(2)<----   gtcaaacatgtggatggtgattcattttgcaggcctttttagtttgttcccctcaaacgagtctaccatcagagaaatattaaaatgctctcatcttgcc  6229100  Previous    Next  AGI:  At4g09930.1    Description:  avirulence-responsive family protein / avirulence induced gene (AIG1) family protein. similar to avirulence-responsive family protein / avirulence induced gene (AIG1) family protein [Arabidopsis thaliana] (TAIR:AT4G09940.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO16380.1); contains InterPro domain AIG1; (InterPro:IPR006703) Range:  from: 6228553    to: 6230076    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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