Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                            <---------YAB1                                       <---------YAB1                                     <--------HAHB4                                     <---------ICU4            <---------ANAC46                                     --------->YAB1            <---------ANAC58                                    <---------YAB1--------->DAG2      <---------YAB1            -----             ---------->DOF2    <---------DAG2--------->YAB1   <---------ANAC58           --------->ALFIN1 ------DOF2------>ZmHOX2a(1)    <----------DOF2  ---------->DOF2   <---------YAB1<-----------HVH21   tttgaattctctcctcaaagtttaaaaatccaaactttatcattactatcaaaaagcttggacctgcttgttattagaaaatgagtcagagagtgttcct  6223700                                          <---------CCA1(2)                                     --------->WOX13(1)                                  --------->ARR14(2)                                  <---------ARR14(2)                                              <--                  <---------ARR14(2)<-------TEIL                                                  ---    <---------ZAT6--------->ARR14(2)------>ZmHOX2a(2)                                        -------- --------->HSFB2a(2)     <---------HSFB2a(2)                                         --------->ARR11(3) --------->HSFC1(1)      --------->HSFB2a(2)                                         <---------ARR11(3) <---------HSFB2a(2)<-------TEIL  ------->TEIL                            <xxxxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3) ->ZmHOX2a(1)     <---------GLK1(2)<------ZmHOX2a(2)              <---------YAB1 ---------->DOF2  <--   cttctagagctagtagacccgattcgtctagacatggatccatcaaatctctgagaaacttgagcttgatgaatagccatagacaaagctcttcgatgca  6223800              --------->ANAC46                     --------->HSFB2a(2)              --------->ANAC58                     <---------HSFB2a(2)              --------->ANAC58                   ----------->RAV1(2)     --------->YAB1         ----- -------GLK1(2)             ----------->HVH21  <---------ANAC58   <---------ALFIN1   <----------DOF2 ------>ARR14(2)          --------------------->WRI1            ------>ZmHOX2a(1) --------->ARR11(3) ->AtLEC2  --------->At4g35610       <-----------GT1  --------->PCF2    <---------YAB1    <<<<<<<<<TBF1 -------ARR14(2)        ------>ZmHOX2a(1)      <---------ANAC58--------->ANAC46   <---------ARR11(3)<   aattctcttcatcagcaagcaacttcctctgtgaacgattcactctcttgcttctggacccatctcctccacttctgataacaacatctttcttcttcat  6223900                                                                                       <---------AHL20(2)                                                                                       --------->AHL20(2)                                                                            --------->KAN4(2)<-------          <---------MYB52(1)                            <----------DOF2    <---------HSFB2a(1)      <         <-----------HVH21                          <---------ZAT18        --------->HSFB2a(1)   <--- ---->AtLEC2                                        --------->ZAT18    --------->ANAC58<---------AHL20(1) ---------At4g35610     --------->ANAC46    ---------->DOF2            --------->ANAC58--------->AHL20(1)   gcagattactctgttacccattcttcacaaaaccctgaatttagcccaaagaagtggactttaatggaaactcaagaaaattctcaaaatttattaaggt  6224000               <---------ICU4             --------->ARR11(3)             <---------ARR11(3)             --------->GLK1(2)    <---------WOX13(1)  --------->ATHB12 --------->AHL20(2) <---------AHL20(2)      <---------YAB1     >>>>>>>>>TBF1 --TOE2(3)  --------->RVE1(1)            >>>>>>>>>TBF1                 <------ZmHOX2a(1) ---------MYB52(1)  <XXXXXXXXXXXXXXXXXXXXMIR859 ----------->GT1  --------->ATHB12<------ZmHOX2a(1)  - ----TEIL   --------->CCA1(1)         >>>>>>>>>TBF1        <-----------HVH21  <---------ICU4    <----   ccattaattgaaaaaaatcttgacttgatgatagagagaagaagaagaagaagtaaaacggtgtcattgattaggatgaataaggacgattcagatttaa  6224100                                                          <---------ANAC58                                                          <---------ANAC46                                                      <---------ANAC46                                                <---------AHL20(2)                                            <---------CCA1(1)                                     <---------ANAC58 <---------ANAC58               <---------YAB1                                     <---------ANAC58 <---------ANAC58             <--------HAHB4                                     <---------ANAC46 --------------------->WRI1   <---------ICU4                           <---------ANAC58 <---------RVE1(1)                     --------->ICU4      --------->At4g35610  <---------ANAC58--------->ARR11(3)                     <---------YAB1 --------->DOF2            <---------ANAC46<---------ARR11(3)                  <---------YAB1 ------ID1     ----------->GT1 *TSS  <-----------RAV1(1)  <---------ANAC58  ---------->ID1 <---------   gacaaagcagccaaagtttgttaattgtttcgtctatttgtgtgggatatttgatttcttgtgtgtttcgacatttttgttctcattattatttctctgt  6224200                                                               <---------ICU4                                                              --------->ICU4                                                              <---------YAB1                                                    <---------AHL20(2)                                                  <---------AHL20(2)                                                <---------AHL20(2)      ---------->DOF2                                               <---------AHL20(1)     <---------YAB1                     ------->TEIL             <---------CCA1(2)--------->ATHB51         <------------CBF                  <-------TEIL     --------->YAB1                 ---------- --GT1  --------->DAG2               <---------At4g35610  <-----------GT1         ---------->DOF2   tccttcacaaaaattgggacatgtatttgtctgactctcagcatattcatatattttttttttcattatttcatgaaagagtctaaaagagaagaaagag  6224300                                                     <-----------ARR10                       <-----------------AGL1        ------->TEIL                      --------->PCF2  --------->ANAC58                                       <-------             ---------->DOF2          --------->ANAC58       --------->ATHB12           <<<<<<<<<TBF1        --------->ANAC58      --------->MYB59        --------->GLK1(2)        --------->At4g35610     --------->At4g35610      <---------TOE2(3)     <---------GLK1(2)         <---------At4g35610 >DOF2  --------->ANAC58 <---------ALFIN1           <---------ARR14(1)     <---------At4g35610   ----   tcttattagcaggcccaaagcccaggcccacttaggtagcaaacaattctcaacgaatctcagtgattgtgagtttcttctgctaccttcttcttctttc  6224400                              --------->LBD16                             <---------HSFC1(1)                             <---------HSFB2a(2)                             --------->HSFB2a(2)                       <---------ARR11(3)            <-----------RAV1(2)                       --------->ARR11(3)       <---------ARR11(3)                       <---------GLK1(2)  --------->At4g35610                       --------->ARR14(2) <---------At4g35610                        <-------TEIL     --------->HSFB2a(2)     --------->HSFC1(1) --------->ARR11(3)      --------->ZAT6       -------- <----------DOF2       <---------ARR14(2) --------->LBD16      <---------YAB1     --------->LBD16 ---DOF2>>>>>>>>>>GATA-1    <---------LBD16    --------->GLK1(1)     <-----------GT1<-----------HVH21 ------>ID1     <------------CBF        <---------LBD16     <----------DOF2     <---------LBD16   tccctttctcgatttcagaattgtagattttccagaaattcttccgcagagttcttcaggcgcttttgattttacctctaattccggttcagaggcagaa  6224500                                                     --------->LBD16                                               --------->MYB46(3)                                              ------------>CBF                                             --------->MYB52(1)                                             ------>MYB83                                             ------>MYB46(1)                            <-----------RAV1(1)                                            --------->MYB55(1)                          --------->ALFIN1                                           <---------MYB111(1)                          <---------ANAC58                                           --------->AtMYB61                            <---------ANAC58                                           <---------MYB111(2)                         --------->MYB55(2)                                           <---------MYB46(2)                          <---------MYB46(3)                                           <---------MYB52(2)                         <---------ANAC46                                           <---------MYB55(2)                      <---------DEAR3(1)                                           <---------MYB59                        ------>ZmHOX2a(1)                                          --------->ANAC46            <-----------GT1 --------->ALFIN1 --->GT1                                <---------ALFIN1  <----------DOF2  <----------DOF2   aaatcgagcatttactgaatttcactggaaatagtctcatcaccacctaacaatccagagctttctagggtttatctctttttcctcggtgtgtggctgt  6224600  Previous    Next  AGI:  At4g09900.1    Description:  hydrolase, alpha/beta fold family protein. similar to hydrolase, alpha/beta fold family protein [Arabidopsis thaliana] (TAIR:AT1G33990.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO16381.1); contains InterPro domain Alpha/beta hydrolase fold-1 (InterPro:IPR000073) Range:  from: 6221661    to: 6224131    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version