Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100             --------->AHL20(2)          --------->AHL20(1)          <---------AHL20(1)         --------->AHL20(2)                                                            ------>ZmHOX2a(1)       ------>MYB83                                                               <---------ALFIN1       ------>MYB46(1)                                                         --------->ANAC58 ------->ANAC46           --------->HSFB2a(2)                                  --------->ANAC58 ----->ANAC58             <---------HSFB2a(2)                                  --------->ANAC46 ----->ANAC58<---------AHL20(2)                            <----------DOF2    --------->SPL7 ----->ANAC46--------->AHL20(2)                   ------>ZmHOX2a(1)          <---------ALFIN1   cacaaaaccaaatatatatatagagtttttagaaaaaactcaaaacctgttcctctctattctttagttccccttctccataccccatccttcccttcaa  6194900                                       ----------->GT1                                 --------->YAB1                                --------------->AGL15                       --------->TOE2(2)                                <---------------AGL15                   <-----------GT1                               --------->ANAC58                        --------->AHL20(2)                             <---------ALFIN1                         <---------YAB1                            --------->ZAT2                          <---------AHL20(2)                            <---------At4g35610                     <---------ICU4                            --------->ZAT14                         --------->ATHB51                        --------->ANAC58                            <--------HAHB4                        --------->ANAC58                            -------->HAHB4                        --------->ANAC55(2)   --------->AHL20(1)    -------->ATHB1                        <---------ANAC55(2)  --------->YAB1         --------->YAB1                        --------->ANAC46     --------->AHL20(2)    <---------ATHB12        <---------ICU4                     <---------MYB52(1)--------->YAB1              <---------ATHB51       --------->ICU4             <---------AHL20(2)--------->ANAC58                    --------->ICU4         <---------YAB1             <---------ICU4 --------->At4g35610                    <---------YAB1      <-------TEIL            --------->ICU4--------->ANAC46--------->YAB1     <-----------GT1--------->TOE1(2)       ----------->GT1 <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2) --------->AHL20(2) <---------YAB1       -   aatggggagaggtaaatatttctgttacgcagcactcaaaatagtaataatattaaaaacatttaactaattattaaacatatgaaagtttcattatttt  6195000                                                                                                    <          <---------ANAC58           <---------ATHB12                                              <-          <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                                                   ---          --------->ANAC55(2)      --------->WOX13(1)                                             <--          <---------ANAC58       <------ZmHOX2a(2)                                        <----------   --------->MYB46(3)           <---------ARR11(3)                               ---------->DOF2<----  -------->P           <----------DOF2              <--------P            <---------HSFB2a(2)   <---- --------->WOX13(1)   <---------ANAC58           <---------TOE2(3)        --------->HSFB2a(2)   <---- -------->MYB46(3)    <---------ANAC58        --------->CCA1(2)    --------->LBD16      <----------DOF2   catcaaccacttacttgatgtttagctttccctagatcaatgaagaagatagaggtaagttgattcttccgaattactagaagtgaagcgctatgttggg  6195100     <---------ANAC46  <---------SPL7  ----------->HVH21                                                           --------->AHL20(2) <---------PCF2                                                            --------->YAB1 ------NtERF2                                                              <xxxxxxxxxxxxxxxxsmallRNA(i) --------MYB46(3)             --------->AHL20(2)      <---------ATHB12    ----------->GT1 ------>ALFIN1              ----------->GT1       <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3) -------AtMYB61            --------->DAG2        --------->ANAC46 --------->ANAC58 -RAV1(1) ---------->DOF2 ---------->DOF2      --------->ANAC46   --------->ANAC58                 -- -----ANAC58         ------>NtERF2             --------->ANAC58   --------->ANAC46              <---- -----ANAC46   --------->MYB52(1)              --------->ANAC58 <-----------GT1            <--------- -----ANAC58  --------->ARR11(1)           <----------DOF2    <-----------HVH21      <------ZmHOX2a(1)   gtgggggacgggaaaagaaacggctcccaaaagtaaattggggttctttacgcccaatgagatgtgtcaccccacaaggataaattaggatttttactac  6195200                          --------->ANAC58                          --------->ANAC58                                            ---------------                        --------->ANAC46                                              <----------DOF2                       ------->GAMYB                                          --------->MYB46(3)                      <---------ALFIN1                                     xxxxxxxxxxxxxxxx>smallRNA(i)                     --------->ZAT14                                   <---------ANAC58     <--------                    ----------->RAV1(1)                                <---------ANAC58  --------->YAB1                   --------->ANAC46                                xxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                 --------->ANAC46                  --------->REM1(1)  xxxxxxxxxxxxxxxxxx>smallRNA(fl3) ------>P        --------->ANAC58          xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)--------->YAB1 -----MYB52(2)   --------->ANAC58        <---------ZAT6         <------ZmHOX2a(1)   --------->ZAT2 --GT1         <-----------GT1 ----------------->AGL3   xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)     ---   taacccagaaggttgtttcacacaacacacgattccatgtatagtgtcattctacatcgtgatggaggacatagcttacaatcaccagctttgatcatgc  6195300                             <---------AHL20(2)                           <---------YAB1                         -------->ATHB1                         <---------ICU4                         --------->ATHB51                         <--------HAHB4                         --------->YAB1                         --------->AHL20(2)                        <---------ATHB51                        <---------ATHB12                        --------->ICU4                        <---------YAB1                    ------------>CBF                   --------->ANAC58                   --------->ANAC58                 --------->GLK1(1)                 --------->CCA1(2)                <---------ARR14(2)                                       --------->YAB1                --------->ARR11(3)                                      <---------YAB1                --------->ARR11(1)                                   <---------AHL20(2)                <---------ARR11(3)                               <------ZmHOX2a(1)                 <-                --------->ARR14(2)                          --------->CCA1(2)                     <-- ------>WRI1  <---------YAB1--------->AHL20(2)             <---------ARR11(3)                    <--- -ICU4        ----------->ARR10                --------->YAB1  <---------TOE2(3)               <----- --->NtERF2   <---------TOE2(3)          <-----------GT1   --------->ARR11(3)      ----------->GT1---   cgctagacatttgattaagatatgcaattattaaaaatgaaattttctatattgatggaaagatttaggattttatgatactgtaatgtaaatttgtata  6195400                                                          ------------>CBF                                                    <------MYB46(1)                                                    <------MYB83         <---------ANAC46                         <---------WOX13(1) --------AHL20(2)                                <------------CBF -------AHL20(1)       ---------->DOF2          <--------ATHB1                             --------->ANAC58 ------AHL20(2)   <---------ANAC55(2)           --------->ATHB12                           --------->ANAC58 ------TBP--------->LBD16                      <---------YAB1                    <------------CBF ------>AHL20(1)  ----------->GT1              --------->ICU4               --------->MYB46(3)   tatattttctaccgtagattatgtaaaaagacatgtttttttgtggagaatgattggtaatgcaatgtctatttggcaacgactattggcattacgctaa  6195500                                            --------->HSFB2a(2)          --------->YAB1                  --------->At4g35610          <---------ICU4                <---------GLK1(2)          --------->ATHB12             <---------At4g35610<---------ICU4         <---------YAB1                --------->At4g35610--------->YAB1              ----------->GT1         --------->ICU4          --------->ICU4      ------------>CBF                 <----------ID1    <---------TOE2(3)            <---------YAB1  --------->YAB1                   ---------->DOF2    --------->ANAC58           --------->YAB1    <---------ICU4              --------->DAG2      <---    --------->ANAC58    --------->HSFB2a(2) <---------HSFB2a(2)             ---------->DOF2    <-----   ctcatcaaggaatgattactacttctctcgaattcatgatcagcttctgaaacatgacaataatcgtcttctgttttaaaaagctaaagagaaaaaattt  6195600                               ----------->GT1                                    <-----------GT1                               --------->TOE2(3)                              --------->ARR14(2)                    <---------YAB1                                            --------->ARR11(3)                <---------AHL20(2)        --------->YAB1                      <---------ARR14(2)              <---------AHL20(2)       --------->YAB1        ----------->GT1  <---------ARR11(3) ------TOE2(3)--------->AHL20(2)  --------->AHL20(2)    <---------MYB52(2)   <------ZmHOX2a(1) ----AHL20(2)--------->YAB1   ----------->GT1--------->AHL20(2)      <----------DOF2            -----   atgttacaaaaactatattaatatgattcaaaatgttaaaataagaataaaaaatgcaactaatagttaaacttttagaggatttttcttatctaaaatt  6195700                                                <---------ZAT14                                                <---------ZAT18                                                --------->ZAT14                                                --------->ZAT18                                             <---------ANAC46                                        <---------DAG2                                        <----------DOF2                                       <---------DAG2                                --------->AHL20(2)                                <---------AHL20(2)                                --------->AHL20(1)                               --------->AHL20(2)     --------->ANAC58                               <---------AHL20(2) ----------->GT1                             --------->YAB1  <---------ANAC58       --------->AHL20(2)  --------->AHL20(2)<---------ANAC58      --------->ZAT6            --------   ----------->GT1  ----------->GT1 <-----------GT1   --------->ANAC58              --------->YAB1 ---->AHL20(2)      <------ZmHOX2a(1) ----------------->AGL1 ----------->GT1  <-----------GT1--------   aaaacatgttaaaatttgcataggataaaaaaaataatttacctttttcgtgcagtaagaaacatgtgaatactacaatttttcaatattgatggaagca  6195800  Previous    Next  AGI:  At4g09860.1    Description:  unknown protein Range:  from: 6194706    to: 6195298    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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