Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                              --------->ANAC58                         <----------DOF2                  --------->MYB52(1)                   <---------WRKY18(1)                   --------->ARR11(1)                --------->TOE2(3)           <-----------RAV1(1)   ---------->DOF2               <----                --------->TOE1(3)        --------->ARR14(2) --------->ANAC46      --------->MYB52(1)-             <---------ALFIN1            <---------ARR14(2) --------->ANAC58    <---------MYB52(2) <-          --------->AtMYB61       ---------->DOF2    ---------->DOF2      ---------->DOF2  ----------   tcagatttaaaaccacaaccttgactgctttcattagaaagggtatatgttgctcaaaagaaacggaacaaagcatcaaagaactaactaaatgagtaaa  6192100            --------->ANAC46            --------->bZIP60(2)         --------->ZAT18     <------NtERF2                        --------->LBD16    --------->LBD16                      <---------LBD16   --------->DEAR3(1)                    <-----------RAV1(2)  <---------LBD16                       --------->TOE1(2)  <------NtERF2             ----------->HVH21 ------>NtERF2             <-----------HVH21<------ZmHOX2a(1) --------->LBD16  --------->YAB1   ---------->DOF2 -----ARR14(2)    <---------ICU4 --------->At5g28300                                 ------->GAMYB -------->ANAC46 <---------YAB1 ----------->GT1         --------->MYB59        --------->YAB1      <- --------LBD16 --------->YAB1 <---------At5g28300 --------->ARR11(3)          <---------YAB1       -- ->GT1   <---------ZAT18  --------->bZIP60(2)     <---------ARR11(3)   <---------TOE2(3) <---------YAB1   tcccgccggagtccacatcatcatcaccatgtcaccgtaaaacccaggagaagatagttatgtccattcttctaatgttgatgataaccacatgataagt  6192200                                              <---------GLK1(2)                                         --------->YAB1                                         -----                                        <---------YAB1                                         <-----                                       --------->AHL20(1)          --------->REM1(1)         <-------                 ---------->DOF2       --------->AHL20(2)        <-----------GT1             --------        ---------->DOF2                <---------AHL20(2)     ----------->GT1               <-------- --------At4g35610                    --------->YAB1         <---------TOE2(3)    ------>ZmHOX2a(1) ------->At4g35610             <------ZmHOX2a(1)      --------->YAB1     <-------TEIL       ---------   tagatgagagtaaagaacacaaaggtgtttagaggaagaattataatagactctcatcaaaataatgttacaacatacattctcctatatagaaattatg  6192300                                                                                       --------->ARR11(3)                                                                                       <---------ARR11(3)                   <---------AHL20(2)                                                  --------->ARR14(2)                  --------->ARR11(3)                                                  --------->CCA1(1)                  <---------ARR11(3)                                                --------->AHL20(2)                  --------->AHL20(2)                                          <---------HSFC1(1)    <   --------->TOE2(3)   --------->AHL20(2)                                     --------->HSFB2a(2)   -  --------->YAB1  --------->AHL20(1)                                   <---------AHL20(2)    xxxxxxxx ---->YAB1        <---------AHL20(2)   --------->TOE2(3)          <---------TOE2(3) --------->YAB1  < ----YAB1         <---------AHL20(1)  ----------->GT1            <-----------GT1 --------->YAB1     - --ICU4        --------->AHL20(2)    <---------TOE2(3)        --------->YAB1  <---------HSFB2a(2)   < ->YAB1       <---------AHL20(2) --------->CCA1(2)       ------------>CBF     --------->HSFC1(1)   <- -ATHB51  --------->AHL20(2)   <<<<<<<<<RAP2.2   <---------HSFB2a(2)   --------->AHL20(2)  xxxxxxxxxx >ICU4  ----------->GT1<---------AHL20(2)        --------->HSFB2a(2)--------->TOE2(3) --------->RVE1(1)   ataaacataaatgtaaataatatatttaaatttagatataatgttaaacttccaaaaactccaatattaacatttattttctagaataatatcttcttgc  6192400               <---------At4g35610               --------->At4g35610           <xxxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)         <----------DOF2        ------>ZmHOX2a(2)                                                <---------ZAT2      --------->ARR11(3)                                             <---------ZAT2       --------->ANAC55(1)      <---------ARR11(3)                                            --------->ANAC58      --------->ANAC58 ---------ARR14(2)                                   <---------ARR14(2)  <---------At4g35610 -------->ARR14(2)                                   --------->ARR14(2) --------->ANAC58  --------->ANAC55(2) xxxxxxxx>smallRNA(i)                               <---------CCA1(2)--------->ZAT2----------->GT1 ---------ARR11(3)                           --------->ARR14(2)     --------->ANAC58      --------->ANAC58 -------->ARR11(3)                           <---------ARR14(2)     --------->ANAC46      --------->ANAC46 ---------ARR11(1)    --------->YAB1        <---------MYB52(1)   ------>MYB83    <---------ANAC46 --------CCA1(2) ------------>CBF          --------->LBD16       ------>MYB46(1)<---------ZAT2    <-- xxxxxx>smallRNA(i)  <---------ATHB12    <---------LBD16------------>CBF--------->ANAC58  <---------ANAC55(2)   catatctcgatcttttcatctcaatcgtcgctcttggtctatctccggttctccatatcccaatacctcccagcaagctcatagctggtaacacgtatga  6192500                                        <---------MYB46(3)                                   --------->SPL7                                   --------->MYB46(3)                                               <                                --------->ANAC46                                                 <---                                ----------->HVH21                                                ----                              --------->ANAC46--------->ICU4                         <---------ANAC46                            <-----------GT1   <---------YAB1          <---------TOE2(2)        ------                   --------->RAP2.6(3)<---------MYB52(1)              <---------TOE1(2)       <------                   <---------LBD16 --------->DEAR3(2)               <---------SPL7 ------->GAMYB-----        ---------->ARF1 <----------DOF2 <---------DEAR3(2)  <-----------GT1<-------TEIL    <--------- ----------CBF    --------->MYB52(1) <-----------HVH21     <---------CCA1(2)    --------->MYB52(1)  <   gattggacatgtctccaaaataccggctttatacccgaccgtcgggtcatcatcgacgtttatatccagtcgtagggttcatcaacggcgtttatacccg  6192600        ---------->DOF2       <---------WRKY38(1)   --------->DAG2  --------->SPL7 <---------MYB52(1) ---------SPL7 ---------------SPL14                                                         ------->TEIL -->NtERF2                                                                   <---------CCA1(2) --->ANAC46  <---------ANAC46                                              --------->ANAC55(2)      < ---LBD16    <---------ANAC58                        ----------->GT1       <---------ANAC55(2)     -- ---->LBD16  <---------ANAC58                      ------->MYC3      ---------->ID1            ------ --GT1 <---------WRKY12                            <-------MYC3  <----------DOF2              <------ ---------RAP2.6(3)                  <---------AHL20(2)     <-------TEIL  --------->MYB59 --------->AHL20(2)   gccgtaaggtcaaagtcgtggtctccatcgtgttcgtagttaatggaaaaccacatggaaaatacatctttgtagttatgtatctccatcgtttaaatca  6192700                                    --------->ATHB12         <---------ANAC58           <---------ICU4         <---------ANAC58          --------->ICU4    ---------->DOF2                <---------YAB1                                                   <   <---------WRKY12              --------->YAB1                                           --------->AHL20(2)   <---------WRKY38(1)           <---------ICU4                                         --------->ANAC58 ----------ID1                  <---------ATHB12                                        --------->ANAC58 ------->DAG2          ------>ZmHOX2a(1)                                            --------->HSFB2a(2) --->YAB1<---------ANAC46       --------->ICU4         <---------ARR11(3)           <---------HSFB2a(2) ---ATHB12            --------->TOE2(3)            --------->YAB1  --------->AHL20(2)   --------->ANAC46   taaggtcaaagtcgtggtctccatcctaaaacccatgatgatttcagttcgaatcaacatctattcaaatcaaatattcttcatttctacaagtaaatcc  6192800                                                                      ------->GAMYB                                                                    --------->ANAC58                                                                    --------->ANAC58                                                           <---------ARR11(3)                   <----                                                           --------->ARR14(2)             ---------->DOF2                       <----------DOF2                     <---------ARR14(2)          ------>NtERF2-                   --------->ANAC58                        --------->ARR11(3)    --------->ANAC46   -                   --------->ANAC58                        --------->GLK1(2)     --------->ANAC58  -- <---------ICU4 <---------ATHB12--------->YAB1             <-----------ARR10     --------->ANAC58 --- ---------DAG2  <------ZmHOX2a(2)<---------KAN4(2)     <------ZmHOX2a(1)    <---------ATHB12   ------   caatttttgctatcaccgatcaagcctttttcaagaataaacccataaacgacttgaggagtatcttcacaagcgccaatgaaacgcgacgacaaagccg  6192900                                           --------->ANAC58                           --------->LBD16                                           --------->ANAC46                         <----------------                                <------NtERF2                                      -------->P          ----------->GT1     <---------ATERF1(2)                            --------->At4g35610    -        ---------->DOF2       --------->ATERF1(2)                            <---------At4g35610    - <---------ABI4(2)           --------->RAP2.6(3)                        --------->ANAC58           -- -----RAP2.6(3)             --------->MYB52(1)                          --------->ANAC46           <- -------->ANAC58           --------->DEAR3(1)                           --------->ANAC58           <- -------->ANAC58          --------->DEAR3(2)                        --------->HSFB2a(2)           --- ------->DAG2             --------->MYB46(3)                        <---------HSFB2a(2)           --- ------->DOF2           --------->MYB52(1) --------->ANAC58--------->ZAT6  <-----------RAV1(2)    --- --->RAP2.6(2)   --------->YAB1------>NtERF2--------->TOE2(3)  <---------At4g35610 --------->MYB52(1)   aaaagcaccgaaaagaaaatcaaaacaaaccgacggcaaacacaaacgtcaaaactggctaactctgcttatagaagccagatgctaccggactagggcc  6193000  Previous    Next  AGI:  At4g09850.1    Description:  unknown protein Range:  from: 6192509    to: 6193127    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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