Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                ----------->GT1                                      <---------ANAC55(2)                              <---------TOE2(3)                                    --------->ANAC55(2)                       --------->AHL20(2)                                          <---------ANAC46                       <---------AHL20(2)                                         <-------TEIL      <---------ARR11(3)--------->AHL20(2)                                      <---------SPL7      --------->ARR11(3)<---------AHL20(2)                   --------->TOE2(3)--------------->AtSPL3      --------->GLK1(2)--------->AHL20(1)                    --------->TOE1(3)<---------------AtSPL8     <---------GLK1(2) <---------AHL20(1)          ---------->DOF2            <---------------AtSPL3  --------->YAB1----------->GT1                 --------->TOE1(3)      --------->ARR11(3) ---->DOF2    <---------------------WRI1        --------->TOE2(3)   --------->AHL20(2)   agaataagaatctttgtgcgataaataaaattaagaaaaaaactctaaaaccttaaagaaaacccttaaaaaaaatcatggaggtacgtataagttttgt  6188400                                                                 --------->AHL20(1)                                                                 --------->AHL20(2)                                    <---------AHL20(2)           <---------AHL20(1)                                    <---------YAB1               <---------AHL20(2)                             --------->ANAC55(2)                --------->AHL20(2)                             --------->ANAC46             --------->ANAC55(2)                             --------->YAB1               --------->ANAC46                      <-------TEIL <---------AHL20(1)     --------->YAB1                           --                     --------->CCA1(2)                   <-------TEIL  <-----------GT1         <-----     --------->MYB52(1)     <-------TEIL           <-------TEIL <---------AHL20(2)     ----------->GT1   aagaaaaaaacagatttatggagatacatatacataatattatttctgaaaaatacatatacataattttattttacccattaacaagtttgtaaattct  6188500                                               ------>ZmHOX2a(1)            --------->ANAC46               <-----------GT1         --------->ZAT14            <---------ARR11(3)          --------->AHL20(2) ---->ZmHOX2a(1)                    --------->ARR11(3)          <---------AHL20(2) ------GT1  <-----------GT1        <---------CCA1(2)     --------->At4g35610   cctcttccctctatacacctcttcaattacttctcttaaatcttttttcctctgtaatcaactcaaaaaattgtttacaaaaatttgctaaaactctctt  6188600          --------->ZAT6        <-----------GT1   --------->AHL20(2)  <---------AHL20(1)                                                     ------------------------>ANAC81  --------->AHL20(1)                                          --------->WOX13(1)  --------->ARR11(3)                                        <---------ATHB12  <---------ARR11(3)                                   --------->ANAC55(2) --------->YAB1                         ----------->GT1<---------ANAC55(2)      <----------ID1   caaaaatatttaacacaattaacaaaaacaaattccaaaactttgtaataagacaataagtaatcaatctccaaaaaaaaaaaaaacaaaaaaaaaaaaa  6188700                           <---------ANAC46                           <---------ANAC58                           <---------ANAC58                        <---------MYB52(1)                       <---------RAP2.6(3)                ------------>CBF        --------->MYB52(2) ----------->GT1   <---------ZAT18      ------>ZmHOX2a(1)    <---------MYB46(3)<---------ANAC58       --------->ZAT18  --------->ARR14(2)        <---------ICU4    <------MYB46(1)   <---------ANAC58   --------------->AtSPL8 *TSS                    <---------GLK1(2)    <------MYB83 <---------ANAC58   --------->TOE1(2)     <---------MYB59            --------->YAB1  <--------P     <---------ANAC58---------->DOF2         --------->ANAC46         <----------DOF2<---   ccttgttggtttgtttgggtcttgccgtttcgtataaaagtgcgaagtaccctctctctacccaattcctcttgttttgtttctctttcataatctccaa  6188800                               --------->ANAC58                               --------->ANAC58                               --------->ANAC46                              <------NtERF2                             <---------ATERF1(1)                             ------>NtERF2                             --------->MYB52(1)                            --------->DEAR3(1)                     <---------MYB52(1)                    <-----------TGA1                    <-----------HVH21      <---------ANAC58                --------->ARR14(2)<---------GLK1(2)                ------->TEIL--------->At1g77200                                          --------->ANAC58                --------->GLK1(2) <---------ARR14(2)                                     --------->ANAC46       <---------ARR14(2)   ----------->HVH21----------->GT1                             --------->ANAC58       <---------GLK1(2)   --------->RAP2.3(1)     --------->YAB1                 ------->GAMYB       --------->ARR14(2)--------->DEAR3(1)<---------ANAC58                      --------->MYB46(3) <   <---------LBD16 --------->ANAC46        <---------ANAC46 --------->ALFIN1    --------->At4g35610<- ------ATHB12   <---------ARR14(2)--------->ARR14(2)  <-----------GT1  ----------->GT1 <---------ALFIN1   tcttcttcggattcgacgaatccgtcatcgccgacggaatcgtggccgtgtaatattaacagatggggaagaagagaaaatcaacagccacaagcctcga  6188900                                     <---------At4g35610                                     --------->At4g35610                                     ------>NtERF2                                    --------->RAP2.6(2)                                    --------->DEAR3(1)                                    --------->RRTF1(3)                                    --------->RAP2.3(2)                                   --------->RAP2.3(1)                                  --------->ABI4(1)       ------>ZmHOX2a(2)         --------->DEAR3(1)     ----------------------->TaNAC69(2)     <---------AGP1              <---------ALFIN1     <---------ARR14(2)         --------->DEAR4(2)     --------->ARR14(2)         --------->MYB46(3)      <----------DOF2   <-------TEIL               <---------ALFIN1          <---------DAG2                              -  <--------P            <----------DOF2      <----------DOF2                  --------->At4g35610  <- ---------ANAC46  --------->ANAC46------>NtERF2       <---------At4g35610   --------->YAB1      ----- --------TOE2(3)<-----------GT1 --------->DEAR3(2)    --------->At4g35610 ------->TEIL    <----------DOF2   tgaggtagatcggactgtttacgcttcttttcgcaccgccgctaactctttatctcagctttatactcagtctatgaatcatcagaagttatcttttcaa  6189000                 <------MYB83                --------->MYB59                --------->MYB46(2)      --------->ANAC46      --------->ANAC58      --------->ANAC58    <---------DOF5.7(2)   <---------WRKY12   <---------WRKY38(1)         <-----------GT1  ----------->HVH21    <---------AHL20(2)                      <----------DOF2  <---------ANAC58 -------->LBD16 <---------AtMYB61                      <---------ANAC58   --------->ATHB12 --------DEAR3(1)<------MYB46(1)                       <---------ANAC58  <-------TEIL ---->ANAC46    --------->MYB111(1)     ----------->HVH21  <---------GLK1(2)    <---------ANAC58<----   gccggtgaacgccatggtttggtattttcttatttactctctgtgactgtttcaatttcttgattctttgtgtgattcattgtcttgacaactctctaat  6189100                                                   <---------WOX13(1)                                          <---------AHL20(2)                                         --------->AHL20(2)                                        <----------DOF2                                     <---------ANAC46                                     <---------ANAC58    <-----------HVH21        <---------YAB1               <---------ANAC58   <----------DOF2  --------->DAG2              --------->MYB52(2) --------->ATHB12                                   < ---------->DOF2            <---------MYB52(1)  <---------YAB1    <---------ANAC58              ----- -----WOX13(1)  <-----------GT1     ---------->ID1>>>>>>>>>ARR2   <---------ANAC58        <---------MYB46(3)   tgaaaaagttttgatttttctcatttctgtgttagttttgcgttttaattttgattgtctttcacagggcttgagacctcttagacaattgtttgttatc  6189200        --------->ANAC58        --------->ANAC58                                <---------ANAC58 <-----------RAV1(1)        <---------At4g35610         <---------ANAC58 ---------YAB1              --------->At4g35610         <---------ANAC46                           -- ---->TOE2(3)       <---------YAB1              <---------ANAC46                     ---------->DOF2   ttattgttggaagcaagagattgtgtttgtagctaaacgtctatgttttctcgtgtttgtgtgtaattgtattagtgagacctatgccaaagatgtgaat  6189300  Previous    Next  AGI:  At4g09830.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G64780.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO43592.1); contains InterPro domain Uncharacterised conserved protein UCP009193 (InterPro:IPR016549) Range:  from: 6188764    to: 6190850    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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