Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                      ----------->RAV1(1)                                                                 --------->ANAC46                                        --------------->AGL15    --------->ANAC58                 ----------->GT1        <---------------AGL15    --------->ANAC58                <-----------------------TaNAC69(2)             ---------->DOF2         --------->YAB1            <----------DOF2         --------->ANAC58        <---------AHL20(2)      <---------ARR11(3)         --------->ANAC58                     -----    <---------YAB1        --------->ANAC46             --------->ZAT6                         <------ <---------AHL20(2)       --------->ANAC58         --------->At5g28300                       <-------GAMYB -------->AHL20(2)        --------->ANAC58<---------ANAC46 --------->ANAC46              <-----------HVH21   aattttataaataatagaaatgtgaaaaacgcaatttctttgctccttgtagcagtaacacaagtcaaagcaacatttgttttcatttgtttgtcagtta  6181600                                                                 <-------TEIL                                                             --------->AHL20(1)                                                     --------->ATHB12                                                     <--------HAHB4                                                     <---------ICU4                                                     --------->ATHB51                                                    --------->ICU4                                                    <---------YAB1                         --------->YAB1              --------->YAB1             --------->AHL20(2)  <---------ARR11(3)           <---------ATHB12   <---------AHL20(2)  <---------YAB1 --------->AHL20(2)     --------->ARR11(3)      ---------->ID1 ---->MYB59--------->YAB1 <----------DOF2<---------AHL20(2) --------->CCA1(2)  --------->ATHB12 ---MYB52(1)  --------->AHL20(2)     --------->AHL20(2)    --------->ARR11(3) <---------YAB1      ---   gctattttatctacaataatatgttatgctttctgaacaataaataaatatagcattattagatatattcattctgtattttgatttgtccaattagtat  6181700                              <---------ICU4                              --------->ATHB51                             --------->ICU4                        <----------DOF2                          <---------ATHB12                        ====================================bZIP_DOF              --------->CCA1(2)                                 -------->P             <---------ARR11(3)       <----------DOF2           ------>MYB83           --------->ANAC46  <---------YAB1                   --------->AtMYB61   --------->ANAC58    ------>ZmHOX2a(2)                     --------->MYB46(3)   <---------O2      <---------AGP1   <---------DAG2         --------->DEAR3(2)   --------->O2      --------->ARR11(3)                --------->At4g35610   <---------ANAC55(2)<------ZmHOX2a(2)               <---------MYB46(3)     --------->YAB1   ================================bZIP_DOF       --------->O2<---------MYB111(1)                ----   --------->ANAC58  <---------ARR11(3)           --------->TGA1a--------->MYB46(3)            ------   --------->TGA1a   --------->AGP1<-----------GT1=======================MYC_MYB        <----------DOF2   <---------TGA1a  <---------CCA1(2) ======================bZIP_DOF--------->AtLEC2<---------WRKY12   ================================bZIP_DOF       ========================================bZIP_DOF -------->HVH21<-------TEIL--------->YAB1     --------->MYB46(3)------>MYB46(1)---------->DOF2 <-----   atgacacgtctacaagatacatagatctttcattatttcactttctcatccaacgtctggtgaaccaaccattcaaaaatcaaaagtcaacttttaatgc  6181800                            <-------TEIL                        <-------TEIL                   --------->YAB1                              <----------DOF2                  ----- --->TEIL         <-------TEIL                        <-------TEIL                      --------->ANAC58 --->ZAT18   --------->AtLEC2                 <---------ICU4<-----------GT1             --------->ANAC58 ----ZAT18--------->WRKY18(1)       <-------TEIL     --------->AtLEC2                 ---------->DOF2   acttgagttttggtcatgcattcatatacatacatatatacatagaagtcattacatgcattatactttacttatgtcaacatgttgcaaaagcactaag  6181900                                                              <---------ANAC58                                           <---------------AGL15                                           --------------->AGL15                                          ----------------->AGL3                                          ----------------->AGL2                                  ---              <-------TEIL         --------->TCP16(1)         <---------ANAC58                   ----     <---------ANAC55(2)           --------->PCF5         <---------YAB1                        -----     --------->ANAC55(2)          <---------TCP16(2)    --------->YAB1                        -------    <-------TEIL                 <---------MYB46(3)     <---------ICU4                        <------ --------->CCA1(2)  ----------->GT1--------->PCF2      <---------YAB1                      --------->YAB1 ---->YAB1   --------->AtLEC2--------->ATHB12          --------->ICU4 ----------->GT1    --------->AHL20(2)   atgatatacgtatacatgcatattgcaaaaatcagtggtcccataccattttaagtcatcatgagcgtatgagagtaaattcttctcacatattaataac  6182000                                                --------->GLK1(1)                                                <---------GLK1(1)                                               <---------ARR14(2)                                               --------->ARR14(2)                                               ------->TEIL                                        <-                                               <-----------ARR10                       <------NtERF2                                               <---------ARR11(1)                  --------->LBD16 --                                              <---------CCA1(2)                    ------>NtERF2  <--                                              <---------ARR14(1)                  <---------RAP2.6(2)                                            <---------ANAC58                      <---------HSFB2a(2)     ---------->DOF2           <---------At4g35610   <---------HSFB2a(2)          <---------LBD16<--- ----->P            *TSS       --------->At4g35610   --------->HSFB2a(2)    <---------YAB1---------->DOF2 --->GAMYB       <---------RVE1(1)     ------->MYC3  --------->LBD16    --------->ANAC55(2)   ------- ---->MYB46(3)  <---------GLK1(2)      <-------MYC3<---------LBD16      <---------ANAC55(2)--------->DAG2 -->YAB1        --------->ARR11(3)  <---------ALFIN1<---------LBD16 ------->TEIL --------->RAP2.6(3)< -----GT1       <---------ARR11(3)-------->P<---------ANAC58  <---------MYB46(3) <---------LBD16 <---   aacccttcaaagttataagatttttagagagagagctaccacgttttcgtatctccgggaacgatggatgaatcaagtattattccggcagagaaagtgg  6182100                                         <-------GAMYB  <---------ZAT2                        <---------MYB46(3)  --------->ZAT2                        <---------DEAR3(2)  --------->At4g35610                  <---------DEAR3(1)  <---------At4g35610                 <------NtERF2                                               <-- --------->ARR14(2)                   <---------------------WRI1                                  <-- -----NtERF2                         <---------RAP2.3(1)                                         ---- ------->LBD16                       <---------DEAR4(2)                                 ------>ZmHOX2a(1) -------DEAR3(1)            <---------At4g35610     <---------ZAT14                  ---------->ID1 - ------ANAC46     <----------DOF2   <---------RAP2.3(2)                   <---------HSFB2a(2)   <---- -->ALFIN1 ---------->DOF2  --------->At4g35610     --------->ZAT14       --------->HSFB2a(2)-------- ------NtERF2  <---------ARR11(3)   <---------RAP2.3(3)                 --------->At4g35610  -------- ------LBD16   --------->ARR11(3)   <---------DEAR3(1)   <---------ZAT14<---------At4g35610 ---------   ccggagctgagaaaaaagagcttcaagggctgcttaagacggcggttcaatctgtggactggacttatagtgtcttctggcaattttgtcctcaacaacg  6182200       <---------CCA1(2)     <---------ANAC58                                 --------->ARR14(2)     <---------ANAC58                                 <---------ARR14(2) -------MYB52(1)                                     <---------CCA1(2) ------P                                        --------->ARR11(3) ----->At5g28300                                <---------ARR11(3)  <---------ANAC55(2) -------->MYB52(2)                        --------->TOE2(3)   <---------ARR11(3) -----MYB46(3)                            --------->YAB1  --------->LBD16 ->MYB52(1)                               --------->TOE1(3)   --------->AHL20(1)   --------->AHL20(2) ---->AtMYB77             <---------CCA1(2)    --------->CCA1(1) <---------AHL20(2)<---------AHL20(2) >MYB46(3)--------->ZAT6  <---------At4g35610--------->YAB1  <---------CCA1(2)  ----------->GT1<-----   gttagtttcttatctctatagttcattcatctctcacaatacaaccataatatctatatccgtatatattatgtaaactatatgtttaaatgaattcggc  6182300                                           <---------AHL20(2)                                          --------->AHL20(2)                      <---------YAB1      <---------AHL20(2)                   <---------GLK1(2)                 <---------ZAT6           <---------AHL20(1)                   --------->ARR11(3)            <---------ANAC46           --------->AHL20(2)              <---------AHL20(2)           ---------->ID1             <---------AHL20(2)               <---------AHL20(1)       <---------ANAC58               --------->AHL20(2)               --------->AHL20(2)       <---------ANAC46        ------>ZmHOX2a(2)                       --------->AHL20(1)       <---------ANAC58      --------->ARR11(3)                <-----------GT1 <---------ARR11(3) <-----------RAV1(1)<-----------GT1   <---------ATHB51   <---------TOE1(3)   <---------YAB1 ----At4g35610   ----------->GT1      --------->ICU4     <---------TOE2(3)   <---------TOE2(3)     --   taattgttggcttgtcgtagtgttacaattcgatcttgaaataattttttttttttttgaaggttttacaaaatttattaagatttttgaactacttata  6182400                                                                                            <------NtERF2                                                                                          --------->bZIP60(1)                                                                                          <---------RAP2.6(2)                                                                                          <---------ATERF1(2)                                                                                          --------->ATERF1(2)                                                                                          <---------bZIP60(1)                                                                                         --------->RAP2.6(3)                                                                                        --------->MYB52(1)                                                                                       ----------->TGA1                                                                                       ----------->HVH21                                                                                     --------->At4g35610                                                                                     <---------At4g35610                           <---------ANAC46                                         <---------AtMYB61                          <---------AtMYB61              <----------ID1         <---------At4g35610                          --------->ALFIN1             --------->YAB1           --------->At4g35610                        <---------ANAC46               ---------->DOF2          <---------LBD16<-----                        --------->ALFIN1               <---------ICU4          --------->MYB52(1)      --------->ATHB12  <---------ANAC58              --------->ICU4          ------->GAMYB------>NtERF2      --------->YAB1    <-----------RAV1(1)           <---------ATHB12       --------->MYB46(3)------     <---------YAB1     <---------ANAC58       ------->GAMYB    <------ZmHOX2a(1)   <---------DEAR3(1) -------->DOF2   --------->ARR11(3)----------->GT1<---------ZAT18           -------->P --------->ALFIN1   tgaaagtatcattgtttagggtcttggtgtgggggaatggatactacaacggtgcaataaagacgaggaagacaactcaaccagcggaggtgacggcaga  6182500  Previous    Next  AGI:  At4g09820.1    Description:  TT8 (TRANSPARENT TESTA 8); DNA binding / transcription factor. Identical to Protein TRANSPARENT TESTA 8 (BHLH42) [Arabidopsis Thaliana] (GB:Q9FT81;GB:Q9SZ97); similar to ATMYC1 (Arabidopsis thaliana myc-related transcription factor 1), DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT4G00480.1); similar to F3G1 [Perilla frutescens] (GB:BAC56998.1); contains InterPro domain Basic helix-loop-helix dimerisation region bHLH; (InterPro:IPR001092); contains InterPro domain Helix-loop-helix DNA-binding; (InterPro:IPR011598) Range:  from: 6182020    to: 6186490    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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