Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                             --------->ARR14(1)                                                          <---------GLK1(2)                                                          --------->ARR14(2)                                                          --------->ARR11(1)                                                          <---------ARR14(2)                                                         --------->HSFB2a(1)       -------->P                                                         --------->HSFC1(2)     --------->MYB46(3)                                                         <---------HSFC1(2)     <---------MYB52(2)                                                         <---------HSFB2a(1)    <---------MYB111(1)                                                        ----------->ARR10       <---------MYB46(2)                                          --------->HSFB2a(1)                   <---------MYB55(2)                                          <---------HSFC1(2)                    <---------MYB111(2)                                          --------->HSFC1(2)<-------TEIL  --------->ANAC46                                          <---------HSFB2a(1)           --------->HSFB2a(2)       <--                                --------->ANAC58  --------->REM1(1)     <---------HSFB2a(2)--------->ZAT6               <---------ALFIN1 --------->ANAC58------>ZmHOX2a(1)  <----------DOF2--------->MYB52(1)-      ---------->DOF2--------->REM1(1)    --------->At4g35610  <---------MYB52(1)------->GAMYB   ----   tattgaagaaaagctcaacaccttcaccataaacacgaacaagaagcttcctacatcgaagattcgtttcttttctaggccaactaaccatgaacacttc  6151000                                                                                            ------>ZmHOX2a(1)                                                                                            =========                                                                                           --------->TOE1(3)                                                                                           --------->TOE2(3)                                                                                      --------->HSFC1(2)                                                                                      <---------HSFB2a(1)                                                                                      <---------HSFC1(2)                                                                                     --------->GLK1(2)                                                                                     --------->ARR11(3)                                                     <---------ANAC55(2)             <-----------ARR10                                              ------>ZmHOX2a(1)                      <---------ARR11(3)            <----------DOF2                  --------->TOE2(3)                       --------->ARR14(2)   <---------WRKY38(1)                       --------->TOE1(3)                       <---------ARR14(2) -------MYB52(1)     <---------ANAC58     <---------ARR14(2)                  <----------DOF2 -------->MYB52(2)   <---------ANAC58     --------->ARR14(2)           ---------->DOF2--------->HSFB2a(1) ----->TOE2(3) --------->ATHB12           <---------ARR11(3)      <---------ANAC46  <---------GLK1(2)   gttagtcatcgctcctttcattggcttcacttcaagactctcaaaatcctcaactacgtctccccatttcgtcgaaagcgcttgaagaatcttccttagc  6151100                                      ------->GAMYB                                      --------->RAP2.6(2)                                      --------->ANAC46                                     --------->DEAR3(2)                                    ------>MYB46(1)                                    ------>MYB83                                    --------->SPL7                                   ------>ZmHOX2a(1)                               --------->GLK1(2)                              <---------GLK1(2)                            ---------->ID1                   <------ZmHOX2a(2)-------->P                         <----------DOF2                   =======================HOX2a_HOX2a              <---------GLK1(2)           --------->ZAT2    --------->HSFB2a(1)                --------->YAB1   <---------At4g35610      <---------ATHB12    --------->YAB1  --------->AHL20(2)  <---------MYB46(3) --------->WOX13(1)------>NtERF2           <<<<<<<<<ARR2         <----------DOF2 =========================HOX2a_HOX2a--------->MYB46(3)      --------->WOX13(1)   <-----------GT1   tcgtctggtgatgagcttgggatcaatccaaagattcctaccgccatctataagaaaaaaaaacaatcaaattctttgtttttttaactttgttacttag  6151200                                                                                           --------->GLK1(2)                                                                                           <---------ARR14(2)                                                           <---------REM1(1)               --------->ARR14(2)          --------->At4g35610                         ---------->DOF2                     --------->GLK1(1)          <---------At4g35610                       --------->ANAC58                  <---------LBD16  <----------DOF2                                   --------->ANAC58           --------->DAG2 <---------ANAC58                            <---------ANAC58                 ---------->DOF2     <-- <---------ANAC58        --------->TOE1(2)   <---------ANAC58      --------->ARR11(3)<---------ANAC46   tttgctttgtttcgctgagtgatcaaacttgggaagaagtagaagaggcttaccaagaaagttgtagagggtcttggagaaaaagttttggggaatcttg  6151300             <---------ARR14(2)                                           <---------ANAC58             --------->GLK1(2)                                            <---------AtLEC2      *TSS             --------->ARR14(2)                                 ----------->GT1    <---------ZAT6             --------->ARR11(3)                               ---------->DOF2    <---------ANAC58            --------->RVE1(1)                              --------->ANAC58      <---------ANAC58      ----------->GT1              <---------ZAT6          --------->ANAC58      <---------ANAC46  -- -------GLK1(1)        <----------DOF2               <-----------HVH21    <---------ANAC58    -------   aaatcagagagaaaaaatctgggtgttttttggtttagagttggagagaagtcttggtcacaaggaaagaaaaattgcatggtgagtgtgagagaggtgt  6151400                                                                     <------MYB83                                                                   <--------P                                                                  <-------GAMYB                                                                  <---------ANAC46                                                                 <------MYB46(1)                                                                 <------MYB83                                                                 <---------MYB46(3)                                                                 <---------DEAR3(2)                                                                --------->MYB55(2)             ------                                                          <---------ANAC58                    -------                       ---------->ID1       <---------ARR11(3)  <---------MYB46(3)   --------->ANAC58                  <----------DOF2     ----------->GT1     <---------ANAC58           --------->ANAC58 -------->DOF2  ------->TEIL       ---------->DOF2   <----------DOF2 <------MYB46(1) --------->ANAC46 -->ALFIN1--------->ICU4 <----------DOF2    --------->ARR11(3) <---------ANAC46 <------ZmHOX2a(1)----   tgaaagagagtatttatggacttttgtctttacataagaaagggaatatctatttctttgtcttggtgggttggatttgagaggaccaagaaacaaataa  6151500                                                                 --------->CCA1(2)                                                                 --------->GLK1(1)                                                     --------->WOX13(1)                                          <---------AtLEC2      <---------ARR11(3)                                    --------->AHL20(2)          --------->ARR11(3) ---->DOF2               --------->AHL20(2)       --------->GLK1(2)                           ------- -->AHL20(2)             <---------AHL20(2)       --------->ARR11(3)            <---------ANAC46   -- ------->GT1    ----------->GT1 <-------TEIL      <---------ARR11(3)       <----------DOF2    -------   agaaaaaatggttttgttttgtaaaatttaaatgttcattatatgcatgaaaaatctatcaaacaagatatcaactactttggggggtttactagtaaga  6151600                                                                                                 <---                                                                                                 <---                                                                                                 ----                                                                                                 ----                                                                                                -----                                                                                            ---------                                                                                            <--------                                                                                            ---------                                                                                        <---------AHL20(2)                                                                                    <---------YAB1                   <------MYB83                                                    --------->AHL20(1)                   <------MYB46(1)                                                 --------->AHL20(2)         <---------YAB1                                <---------YAB1              <---------AHL20(1)   <---------AHL20(2)   --------->DAG2           --------->AHL20(1)                <---------AHL20(2)  --------->AHL20(2)  ---------->DOF2            --------->AHL20(2)               <---------AHL20(2) -->ANAC58        --------->MYB59                <---------AHL20(2)               --------->AHL20(2) ------->YAB1 --------->ATHB12     <-------TEIL  <---------AHL20(1)               --------->YAB1<---- -->ANAC58 <-----------------AG   --------->CCA1(2) <---------YAB1       --------->ZAT6--------->AHL20(2)   aacataaaattttgtttgatttggtaaaggtgaaagatacaatgtttctattttattattagagaaaattttgtttcactaaaattatattaaataaaat  6151700         <---------AHL20(2) ------AHL20(2) ------AHL20(1) ----->AHL20(1) ----->AHL20(2)                                           <---------ANAC58 ---->AHL20(2)                <-------TEIL                <---------ANAC46 >AHL20(2)             ---------->DOF2                <---------ANAC58      --------->ANAC58        < -AHL20(2)          --------->AtLEC2                  <---------ANAC58      --------->ANAC46  <------ >AHL20(1)        ---------->DOF2               --------->MYB52(1)----------->GT1        <-------TEIL -----AHL20(2)  <---------MYB52(1)  <---------ANAC55(2)   <---------ANAC58  --------->ANAC58 --------   aaattagaaatttaaaccggtaatgcaaagcatacattacatatatgtgaaaacggtcttgcgtttatgtgttaaaacacgaaaaacaaggttcataaaa  6151800                                                                    --------->ICU4           --------->AtMYB61                               <---------AHL20(2)                      <-          --------->MYB46(3)                               --------->AHL20(2)                    ----   XXXXXXXXXXXXXXXXXXXX>MIR832-3P                         --------->YAB1    --------->ANAC58     ----  <---------GLK1(2)                                 --------->ARR11(3)      --------->ANAC58     <--- ---------YAB1                     <------MYB83     --------->GLK1(2)--------->ATHB12        -------- ---AHL20(2)                       <------MYB46(1)  <---------ARR11(3)    ---------->DOF2  <---------TOE2(3) ->AHL20(2)------->GAMYB         <--------P   ----------->RAV1(1)   <---------YAB1     <---------At4g35610   ttttgattctcaaccaaaacatgtttgtaaaacatgtaggtttgacaacaacaaaatctattaaaatgttatgatttaaagcaattttcagataagatta  6151900  Previous    Next  AGI:  At4g09760.1    Description:  choline kinase, putative. similar to ATCK1 (CHOLINE KINASE) [Arabidopsis thaliana] (TAIR:AT1G71697.1); similar to GmCK2p (GB:AAC49375.1); contains InterPro domain Aminoglycoside phosphotransferase (InterPro:IPR002575); contains InterPro domain Protein kinase-like (InterPro:IPR011009); contains InterPro domain Choline kinase, N-terminal (InterPro:IPR007521); contains InterPro domain Choline/ethanolamine kinase (InterPro:IPR002573) Range:  from: 6148755    to: 6151396    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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