Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                --------->ATHB12                              --------->ATHB51     --------->ICU4           <--------ATHB1   <<<<<<<<<WRKY18            -------->HAHB4<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2) ------ARR11(3)         <---------MYB59     <---------ANAC58 ----->ARR11(3)         --------->TOE1(3)   <---------ANAC58 ----->GLK1(2)          --------->TOE2(3) ------->TEIL ---->RVE1(1)  ----------->GT1<---------ICU4<---------ANAC46                      ---------->ID1 ->AHL20(2)  ---------->DOF2 <---------ATHB51                                <----------DOF2      <-- ->YAB1    <---------YAB1    <---------AHL20(2)      --------->TOE2(3)     ------>ZmHOX2a(1)      --- -ATHB12   <---------TOE2(3) --------->AHL20(2)  <--------P       <---------At4g35610            <---   atctgtcaaaattaagaaagtaaaaacctaaataattgaacatgtatcgtggtagcctaaaacagttgagcttcttcctcttttgttttttttcatacaa  6104000                                                                          <---------AHL20(2)                                                                          --------->AHL20(2)                                                                        <---------AHL20(2)                                                                     <---------AHL20(1)                                                                     --------->AHL20(1)                                                                    <---------AHL20(2)                                  <xxxxxxxxxxxxxxxxsmallRNA(i)    <---------AHL20(2)          <------                          <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)    --------->AHL20(2)         --------                          <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)  <---------AHL20(2)       --------->AHL20(2)                       <---------TOE1(3)     <---------TOE2(3)  --------->AHL20(2)   ----------->GT1                       <---------TOE2(3)     <---------TOE1(3)<---------AHL20(2)   ---------->DOF2 -------ICU4          xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)   --------->AHL20(2)  <---------AHL20(2) ------>YAB1          <xxxxxxxxxxxxxxxxsmallRNA(i)     <----------DOF2<---------AHL20(2) <---------AHL20(2) ------ATHB12       <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)  --------->AHL20(2)  --------->AHL20(2)   tcatcacatctttgaaaatcagattaaggctcgagactatagatttcaaggtaaactcttttatatatatatatatttttttatataaagtttaatttac  6104100                                    <---------MYB52(1)                                         ------   --------->MYB46(3)            <-------TEIL<---------AHL20(2)                                <-----  -------->P             --------->ANAC58   --------->AHL20(2)            <------------CBF    <------ --------->WOX13(1)      --------->ANAC58   <---------AHL20(2)         <-----------HVH21      ------- -----GT1              ---------->DOF2     <---------WOX13(1)   <---------YAB1            <---------- ->AHL20(2)          <---------ANAC55(2)<---------YAB1        ----------->GT1      ------------>CBF   tatcaaccaatttcaatttgatcacttaagcaaaattcgtttgtgattaatttagtttttggtgttgttattctgtcattgaaaactcaattcgtcatta  6104200                                 <-----------GT1                                <---------ARR14(2)                                --------->ARR14(2)                                <---------ARR11(3)                      --------->MYB52(2)                                                        <----   <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                                                       ------ --->ATHB51         <---------MYB52(1)                                                     --------->At5g28300 ----ICU4          --------->TOE1(3)                                                     --------->ZAT6 ---YAB1           --------->TOE2(3)  <----------DOF2                            <---------AHL20(2) -->ICU4   <----------DOF2 ------------>CBF                                     <---------AHL20(2) -TGA1   <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)          <---------TOE2(3)       --------->AHL20(2) <-   tttcatgagttttctttgtaacgttagtcgtcaatatactcttttcttcttaatttttgatgtaatttgttttagtttctaatttaatctcacagtaatt  6104300                                      --------->DAG2                                           <-----                               <---------ICU4                                                <-------                              <---------ATHB12                                            <----------                             ------->TEIL                                                 --------->AHL20(2)      --------->YAB1      <---------YAB1   <---------LBD16                             <---------ARR11(3)   <---------ICU4<---------TOE2(3)--------->YAB1                                     --------->ICU4 -----ICU4      ---------->DOF2--------->YAB1--------->LBD16  <---------YAB1         <---------YAB1 --->ICU4      --------->AHL20(2)--------->ICU4           <---------AHL20(2)       --------->YAB1 ----------GT1 <---------AHL20(2)<---------YAB1     ------------>CBF            <---------At4g35610   tttactaatgacaaaaattaaagttgtcatgaatcatgataaggccacggagaaaacaatttttatgtttgatttaagtttcaactcatgatttttatat  6104400                                                                           ----------->RAV1(2)                                                                         <---------ALFIN1                                                                         --------->AtMYB61                                                                         --------->DEAR3(1)                                                                       ------>NtERF2                                                                       <---------ATERF1(1)                                                                      --------->DEAR3(1)                                                                    <---------ATERF1(1)                                                                    ------>NtERF2                                                                    --------->LBD16                                                                   --------->ANAC58          <-------                                                                   --------->ANAC46          <-------                                                                   --------->ANAC58          --------                             ----------->RAV1(1)              <---------ARR14(2)             --------                            --------->REM1(1)                 --------->ARR11(3)         <---------YAB1                      --------->ANAC58                        <---------ARR11(3)        <---------AHL20(2)                   <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)      --------->GLK1(2)         --------->AHL20(2)   <---------------AGL15    --------->MYB46(3)                --------->ARR14(2)    <---------AHL20(2)   --------------->AGL15  ----------->RAV1(1)                 <-----------ARR10    <---------AHL20(2) -------CBF       --------->ANAC58  --------->AHL20(1)   ----------->GT1--------->MYB46(3)--------->YAB1 --AHL20(2)       --------->ANAC58 --------->YAB1   <---------YAB1<---------LBD16  --------->AHL20(2) -TBP <---------YAB1  --------->ANAC58     ------->TEIL---------->DOF2<---------ALFIN1 --------->YAB1   tgtttcttatttttgtatgtaggcaaggcaacaacaaaaataatgtatcggtttatgaaaagaaaatctccgccaccacctgatattaattttaataaat  6104500                                                                 <---------TGA1a          --------->ANAC46                                       <---------ANAC46          --------->ANAC58                                       --------->TGA1a          --------->ANAC58                                       <---------O2          <---------------AGL15                                  --------->O2          --------->LBD16                                     <---------TOE2(1)         <---------LBD16                                      <---------TOE1(1)        ------>ZmHOX2a(2)                                    --------->SPL7       --------->PCF5                                        <-------TEIL  --------->O2        --------->DAG2            ===========================bZIP_DOF --AHL20(1)          ---------->DOF2            ---------->DOF2  ----------->GT1 --AHL20(2)      <----------ID1          --------->TOE2(3) <---------SPL7   --------->ATHB12 ->AHL20(1)  ---------->DOF2          --------->YAB1     <---------------AtSPL8            <xxxxxxxxx ->AHL20(2)--------->LBD16           <---------YAB1  --------->CCA1(2)     <---------AHL20(2)   tgccaagtgatcccgcaaagagaaaaagcattctaagttatcatcttaatcaaagagatgaggtacgacgtgaatatttgattaggggaccttgtcaacc  6104600                                                                                         <---------ZAT14                                                                                    <------MYB83                                                                                    <------MYB46(1)                                                                                  <--------P                                                                                 <---------ANAC46                                                                                --------->ATHB12                                        --------->ANAC58                        <------MYB46(1)                                     xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)       <---------MYB46(3)                                    <-----------HVH21                           --------->MYB55(2)  -                                xxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)          <---------WOX13(1)   xx                                xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)       --------->ATHB12      <xx                                --------->DAG2                              <---------MYB46(3) ------                              ---------->DOF2                              <---------YAB1--------->ZAT14                        --------->ATHB12--------->ANAC58                xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)           xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)                       <---------AtLEC2<---------ANAC46 xxxxxxxsmallRNA(i)  --------->YAB1--------->ALFIN1             --------->ATHB12<------MYB83 <-------   tcgtggtcataagtttaaacaaatagtaattggaaaggtgttacgccgttttaatccaaaatggtttgatttgtatggtgattggttggagtatagtgtg  6104700                 <---------ANAC46                 <---------ANAC58                 <---------ANAC58            <---------ZAT2       --------->DAG2   <---------ZAT6   <------ZmHOX2a(2)      ---------->DOF2   ----------->GT1 xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3) --------->DOF2  <---------AtLEC2       --------->ARR11(3) xxxxxxxxxxxxxxxxxxxx>smallRNA(se3)    --------->GLK1(1) xxxxxxxxxxxxxxsmallRNA(i)   <---------ANAC55(2)   --------->GLK1(1) --->ALFIN1<---------DAG2    --------->ANAC55(2)   <---------GLK1(1)    <----------DOF2 --ANAC46  <----------DOF2 <-----------GT1   --------->ZAT2      <---------ZAT6                     <   gagaaagaaaaagctttttgcttgtattgttacttattcagagatcaagctggaaatcaaggagggagtgatagctttctatcaactggtttttgtagtt  6104800                      -------->P                      ------>MYB83                      ------>MYB46(1)                                                        <-------                     ----------->RAV1(1)                --------->YAB1                   xxxxxxxxxxxx                <------MYB46(1)                         <---------ICU4                 <xxxxxxxxxxxxx                <------MYB83                            -------->HAHB4                <----------ID1              <--------P  <-------MYC3                 --------->ICU4          xxxxxxxxxxxxxxxxxxxxxx            <------MYB46(1)                          --------->YAB1           <---------ARR14(2)            <------MYB83  ------->MYC3              <---------YAB1           <------ZmHOX2a(1)      -   <---------TOE2(3)xxxxxxxxxxxxxxxx>smallRNA(i)  --------->YAB1     xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3) xxxxxxxxxxxxxxxxxsmallRNA(se3)                  <---------YAB1---------->DOF2--------->ARR14(2)<xxxx   ggaataaggctgataggttggaccaacatgtgggattggatgtgaatagttttcataataatgccaaaagaaaatgtgaggatttgatgagacaaggtca  6104900  Previous    Next  AGI:  At4g09660.1    Description:  similar to hAT dimerisation domain-containing protein [Arabidopsis thaliana] (TAIR:AT3G29765.1); similar to unknown protein [Arabidopsis thaliana] (TAIR:AT3G29763.1); similar to hAT dimerisation domain-containing protein [Arabidopsis thaliana] (TAIR:AT1G19260.1); similar to Putative hAT family dimerisation domain containing protein, identical [Solanum demissum] (GB:AAT38794.1); contains InterPro domain Zinc finger, TTF-type (InterPro:IPR006580) Range:  from: 6104443    to: 6106604    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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