Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                              <----------DOF2                                                          --------->At4g35610     <---------YAB1             <-----------GT1    --------->ANAC58                           <------  --------->ICU4     --------->DAG2  ------>MYB46(1)      --------->ZAT2              <---------ATHB12 --------->DOF2     ---------->DOF2  ------>MYB83  --------->ANAC58     <----------DOF2       ------- >TOE1(2)       <---------MYB52(2)----------->RAV1(2)   <---------ALFIN1------>ZmHOX2a(1)------->TEIL   agaaaagatgatacagcaactaaaaagcagagataaacctgccctgagaccagaagcaccagctttcttaagtcctttcttcttaacaatgaagctagct  6090500                                                                 --------->ANAC58                                                                 --------->ANAC55(2)                                                                 --------->ANAC58                                                                 --------->ANAC46                                                               <-----------GT1                                                  --------->ANAC58                                                  --------->ANAC46       <---------YAB1               <----------DOF2 ----------------------->TaNAC69(2)    ------->TEIL            XXXXXXXXXXXXXXXXXXXX>MIR4240  --------->TOE2(3)                         < <---------ATHB12           --------->ANAC46      --------->ANAC58   <---------CCA1(2)              < ---ZAT2                  --------->ZAT6        --------->At4g35610 ------->TEIL            --------- -->At4g35610           ----------->RAV1(1)  <---------YAB1<----------DOF2        --------->ZAT6    <   ccaatgaatatacttgaagatagagccaacactaaaccctttacattatcagacgacattcctttatacgcatctctccaacttccactagaatacacca  6090600                         ---------->DOF2      --------->ANAC46  <xxxxxxxxxxxxxxxxsmallRNA(s)  ---------->DOF2 ---------ANAC58      --------->TOE2(3)      --------->ANAC46                             <---------DEAR3(1) ---------ANAC46      --------->TOE1(3)     ------->GAMYB         <----------DOF2  --------->TOE2(3) >ANAC46             --------->ZAT6      <-----------GT1   ----------->RAV1(2)  <---------ARR14(2) ---------ANAC58--------->TOE2(3)       <-----------GT1   <---------ARR11(3)    --------->ARR14(2) <-   ttgcttctacagaacaaaacttaaccctaaacccctaaatttttaacccacaaggccaaagacctgagctttggctactgggtattctcaattcggcgaa  6090700                                         <---------MYB52(1)                                         <-------GAMYB                                        <---------DEAR3(2)                                        <------MYB83                                       <---------DREB2C(2)                                    --------->O2                          ------>ZmHOX2a(2)   <----------DOF2                          =====================================HOX2a_HOX2a                         <------ZmHOX2a(2)   <---------ANAC58                        --------->ARR11(3)   <---------ANAC58                        <---------ARR11(3)   <---------ANAC46                        --------->ARR14(2)  <------NtERF2                        --------->AGP1 <---------DEAR4(1)                        <---------AGP1 <---------DEAR3(1)                        <---------ARR14(2) ------>NtERF2                   <-----------HVH21=====================bZIP_DOF                           <------ZmHOX2a(2)             ---------->DOF2        --------->TGA1a                                        <---------ARR11(3)             =================================bZIP_DOF                                     --------->ARR11(3)      ========================================bZIP_DOF                                <---------REM1(1)      ---------->DOF2  <---------CCA1(2)<------MYB46(1)                   <---------HSFB2a(2) ----------->GT1  ============================bZIP_DOF    --------->At4g35610      <-----------RAV1(1) --------At5g28300<----------DOF2   =============MYC_MYB<------ZmHOX2a(1) --------->HSFB2a(2)   ttacagtgaaaagtcgaaagctttcagatcttaaacccaagtcggtggctttgggtaaggagatgaattaggggttcgagagcaaatgttgtagatcaca  6090800                                                                     ------->GAMYB                                                                   -------->P                                                                  ------->GAMYB                                                                 --------->MYB46(3)                                                            --------->ANAC58                                                            --------->ANAC58                                                            ----------->GT1--------->GLK1(2)       --                                                            --------->ANAC46                    -----                                                            <---------ANAC55(2)                <-----                                  --------->ZAT14           --------->ANAC55(1)             ---------               <----------ARF1    <---------ZAT14           --------->ANAC55(2)   --------->YAB1<----  --------->DAG2             ---------->DOF2               <-----------------------TaNAC69(2)-------- ---------->DOF2          >>>>>>>>>TBF1        --------->GLK1(2) <---------MYB111(1) *TSS ---------->DOF2   acaaaaagagacaatgggagagaaggaagaagaaagtgaagtgatgaagaatctaagaagacgcgtaacaacccaagaatccaataagaagagaaaggta  6090900                                                                                               <-----                                                                                               ------                                                                                               ------                                                                                               ------                                             --------->DAG2                                    ------                                    ----------->GT1                       --------->AHL20(2)   ------ ------->CCA1(2)     <------------CBF       ---------->DOF2    <---------ARR11(3)              ------ ------>ARR10     ------------>CBF --------->ALFIN1            --------->ARR11(3)         --------->ZAT14 ---P    <---------ANAC58        <---------bZIP60(2)          --------->At4g35610        <---------DAG2 >DAG2   <---------ANAC55(1)     <---------ANAC46      <----------DOF2    <---------AHL20(2)<-------- ---TEIL <---------ANAC46      --------->ZAT14   <-----------GT1      <----------DOF2    <----------DOF2 --->GT1 <---------ANAC58      <---------ZAT14----------->GT1 <---------At4g35610     <---------ALFIN1   gataagcgtttgcgtgtgtttgcaattgcatagtgaagtggtgagaaaaagtaactcctttggaagctctctctttttaatttgtcttccactttacacg  6091000                   ------>ZmHOX2a(1)                   <---------CCA1(2)                 ------>ZmHOX2a(2)      <---------YAB1   <----------DOF2 ----O2         <------ZmHOX2a(2) --->ANAC46    --------->ARR14(2) --->ANAC55(2) <---------ARR11(3) --->ANAC55(1) <---------ARR14(3)        --------->TOE1(3) --->ANAC58    <---------ARR14(2)        --------->YAB1 --->ANAC58    --------->ARR14(3)        --------->TOE2(3)           ---------->DOF2 --->O2        --------->ARR11(3)       <---------ATHB12     --------->TOE2(3)      <---------ZAT18 -REM1(2)    ----------->ARR10 --------->ANAC46           <-----------GT1   <---------ALFIN1       <-   tcttcgatattagtgaagatcctatctttttatacgaagccaatcttaaaacccaaaaatttacattagagaaaagtcacacttggtgctcttgtcactc  6091100                                                                                                 ----                                                                                     <---------HSFB2a(2)                                                                                     --------->HSFB2a(2)                                                                                  <----------DOF2<---                                                                               --------------->AGL15                                                                               ---------->ID1   <----                                                                               <---------------AGL15                                                                              <-----------------AGL1         --------------->AtSPL3                                               <-----------------AG---         --------------->AtSPL8            --------->AHL20(2)                 <-----------------AGL2         <---------ICU4                    <---------AHL20(2)                 <-----------GT1  ------   <------MYB83         <---------------AGL15          ----------->GT1        <-----------------AGL3   <------MYB46(1)      --------------->AGL15        <------ZmHOX2a(1)      <-----------GT1    <----- --------STY1(2)        =======================================================================MADS_MADS   ttgctaggtgatcagtacaaatacttcttaatgaagaatagacataaaaatgtaaggaggtgatttctcttgtcaatttttctccttttggaaatgagat  6091200                                                                            xxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                                                                   xxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                                                                 <---------ANAC46                                                                 <---------ANAC58                                                                 <---------ANAC58 --------->At5g28300                                                     <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                                                    xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)                                                   xxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)                                        <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)  <---------LBD16                                        <xxxxxxxxxxxxxxxxsmallRNA(i)   --------->ETT(2)                                        <---------WRKY38(1)  xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                                        <---------WRKY12     xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(s2)                                      <-----------HVH21 ------>NtERF2 <xxxxxxxxxxxxxxxxsmallRNA(s)                                    xxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)    xxxxxxxxxxxxxxxx>smallRNA(s)                                    <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)   <----------DOF2                                    <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)   xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                                  -------->P       <xxxxxxxxxxxxxxxxxxxsmallRNA(le3)                              <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                             xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)xxxxxxxxxxxxxxxxxxxx>smallRNA(l2)                            <---------ANAC58      <---------ANAC58 <xxxxxxxxxxxxxxxxsmallRNA(i)                            <---------ANAC46     <---------At4g35610--------->ZAT18                          --------->MYB55(2)     <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                          <------MYB83xxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)<xxxxxxxxxxxxxxxxsmallRNA(s)                          <------MYB46(1)        <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)    <----------                          <---------MYB46(3)   xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3) ----------->ARR10                         xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)                      <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)  xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)       --------->AHL20(2)<---------AtMYB61    <---------MYB52(1)--------->ATHB12<---------ANAC46<----       <---------AHL20(2)--------->ALFIN1--------->MYB52(1)  xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)      --------->AHL20(2) xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3) xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)    xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)<---------DOF5.7(2)------>MYB46(1)--------->TOE2(3)  xxxxxxx ----->KAN4(1)       <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)  ------>MYB83 xxxxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3) ------KAN4(1)       xxxxxxxxxxxxxxxx>smallRNA(i)--------->At4g35610xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3) --ZmHOX2a(2)       <---------LBD16<xxxxxxxxxxxxxxxxsmallRNA(i)<xxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3) ------>KAN4(2) xxxxxxxxxxxxxxxxxxxx>smallRNA(le3)<---------ANAC58xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(l2) --->ARR11(3)   <----------DOF2 <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3) ----ARR11(3)---------->ID1 <---------ANAC58<---------MYB46(3)xxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)---   cattcccatttatttgttcttttcagggtggtttgcaacctgtcaacggttagcttgccaccaaattgagtggtctacctttgcggtgagttttgccact  6091300               ------>ZmHOX2a(1)          <-----------GT1   <---------AHL20(1)   <---------ARR11(3)   --------->AHL20(1)                            <-------GAMYB   --------->ARR11(3)                           <---------ANAC46  --------->RVE1(1)                             <---------ANAC58                     <----------ID1  --------->CCA1(1)                    <---------ANAC58                     <---------AHL20(2) -GT1 <----------DOF2                  <---------ANAC58               <---------AtLEC2 ------DOF2    <----------DOF2       <---------YAB1                   <---------ANAC58  --------->ANAC58 xxxxxxxxxxxxxxxx>smallRNA(le3) <---------ZAT6  <---------ANAC58      <---------ANAC46  --------->ANAC58 ------>AHL20(2)      <-----------GT1<---------TOE2(3)<-----------GT1 <---------ANAC58--------->CCA1(2)   ttaaatatcttttaatccttttttttatcttatagtattaagcttgtgtttcgttgtaacgatttctaggttgcatgtttatttagagagacgaaaacct  6091400  Previous    Next  AGI:  At4g09640.1    Description:  similar to permease-related [Arabidopsis thaliana] (TAIR:AT1G34470.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN81783.1); contains InterPro domain Protein of unknown function DUF803 (InterPro:IPR008521) Range:  from: 6088210    to: 6090885    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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