Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                     --------->ANAC58                                                                                   --------->ANAC58                                                                           --------->At4g35610                 <---------MYB46(3)                                        <---------At4g35610                 <-----------RAV1(1)                                 <----------DOF2--------->LBD16               <---------At4g35610                                  --------->TOE2(3)               -               --------->At4g35610                                -------->P    <---------ALFIN1    -             --------->MYB46(3)                      <---------ARR14(2)    <---------GLK1(1)  -------      --------->At5g28300                            --------->ARR14(2)  <---------AtLEC2--------->YAB1     ----------->GT1  <---------ANAC58         <------NtERF2      ------->TEIL --------->MYB46(3)   <   <---------At4g35610<---------ANAC58 <---------GLK1(2)       <---------At4g35610 --------->ANAC46 <   --------->At4g35610<---------AtLEC2 <---------ARR14(2)     ------->TEIL------->TEIL   <---------ICU4 --ALFIN1 --------->MYB46(3)           --------->ARR14(2)--------->At4g35610   <---------MYB55(2) <--   gttgcagcggtaacaacagctgttgcatgctctcaaacacagatttggcctcgacgatttgctgcatctacctttgcatctcccaccgcaatcttcacat  6073200     <---------AHL20(2) <---------AHL20(2)                                              <---------DAG2 -------->ARR11(3)                                            --------->ZAT6          <---------ANAC55(2) -------->AHL20(1)                                          <-----------GT1           --------->ANAC55(2) -->ANAC55(2)                <------------MYB.PH3(1)     --------->CCA1(2)       <---------ANAC58 ---------ARR11(3)          <---------At5g28300         <---------ARR11(3)       <---------ANAC58 --- ---------AHL20(1)         <-----------GT1     <---------AHL20(2)<----------DOF2 <---------ZAT6 <---- -------ARR11(3)          <-----------GT1--------->YAB1 --------->ARR11(3)      <---------TOE1(3) <--   gatatatttatacacatatgactagtttttaaccgtttaaaaatcatatataaacagagatataacactttacatatatgttagcgttacataccaattt  6073300                                                                     <---------YAB1                      <---------ARR14(2)                           --------->YAB1              ------>MYB83                                        <---------YAB1            --------->DEAR3(1)                                  <---------ICU4       <-----------HVH21                                        <--------HAHB4    ------>NtERF2----------->GT1             --------->At4g35610--------->ATHB51   --------->ANAC58   ------->TEIL           <---------At4g35610-------->ATHB1   --------->ANAC58   --------->ARR14(2)    ------->TEIL        --------->YAB1   --------->ANAC46  <---------CCA1(2)------->TEIL             --------->ICU4                   ----- ------>ZAT6--------->DREB2C(2)----------->RAV1(1)         <---------YAB1                       <---- -------GT1--------->DEAR3(2)<---------At4g35610         --------->YAB1                       <------ ---------GT1 ------>MYB46(1)--------->At4g35610        --------->ICU4--------->ATHB12        <------   tcactacgccttcaccgacttgtgaatcttcagcagcatgaacatgaagctgaagagaatgatgaattattatcattgatcaaacacatatgaattaagg  6073400                                                                               --------->At5g28300                                                                              ----------->GT1                                                                            <---------At4g35610                                                                            --------->At4g35610<-----      --------->ANAC58                                 --------->ALFIN1  <------ZmHOX2a(2)  ------->TEIL      --------->ANAC58   ----------->GT1            --------->DAG2      --------->ARR14(2)--------->ZAT14 ---->YAB1      <-------TEIL                   --------->TOE1(3)        <---------ARR14(2)<---------ZAT14 --ZmHOX2a(1)--------->ATHB12      ---------->DOF2 ---------->DOF2     <------ZmHOX2a(1)  <---------ZAT18 ---TOE1(3)  -------->HAHB4   <----------ID1   --------->TOE2(3) --------->At4g35610      --------->ZAT18 ---TOE2(3) <---------ATHB12---------->DOF2  ------->TEIL        <---------At4g35610     <---------ZAT6   ataagacgaagcaaatgattcatggagaagtaaagacaaaagttatgaacctcaaaagtggtgaggcagaagaggatcagcagtaaaactagtgtacttc  6073500                                             <-----------GT1                                        --------->CCA1(2)                                       <---------ARR11(3)                                       --------->ARR11(3)                               <---------ANAC58                                   --------->AHL20(2)                  --------->DAG2     --------->ANAC58                     --------->At4g35610         --------->O2          <---------ANAC46                --------------->AGL15      --------->AHL20(2)   <---------WOX13(1)          <---------ANAC58                <---------------AGL15<---------ANAC55(2) <---------HSFB2a(1)        --------->ARR14(2)                <-----------------AGL3<---------TOE2(3) --------->HSFB2a(1)        <---------ARR14(2)             <---------GLK1(2)  --------->REM1(1)    <- ----LBD16       ---------->DOF2     --------->ANAC58    <XXXXXXXXXXXXXXXXXXXXMIR1887     <---------AHL20(2)   ggaagattgccatgtctcaaaaagcatgcagtttcgtgcaagatataaaactattctctctgattctctatttagtagctacaattaagtatataaatct  6073600                                                    ----------->GT1                                             <-----------GT1                                         <---------YAB1                                      <---------AHL20(1)                      <---------YAB1  <---------AHL20(2)                      --------->ICU4  --------->AHL20(2)         *TSS    --------->YAB1    --------->AHL20(1)           <------------CBF     <----------DOF2--------->YAB1 <---------AHL20(1)          >>>>>>>>>EIN3 --------ALFIN1<-----------TBP     --------->AHL20(2)        <-----------GT1                       <-   aacacctctttgggtttatttataatgcttattcaaatattttatttttacaagttgtatattatacattgcgaaatagaatcactaaacctagttttca  6073700                                                             <---------ANAC58                                                             <---------ANAC58                                                             <------MYB46(1)                                                             <------MYB83                                                            <---------DEAR3(1)                                                            --------->MYB111(2)                                                            <---------MYB46(3)                                                            --------->MYB55(2)                                                           <---------MYB55(1)                                                           --------->ALFIN1                       --------->YAB1                      <---------ANAC46                  --------->SPL7                         <---------ANAC46                --------->TOE1(2)                        <---------MYB46(3)                <---------SPL7                          --------->ALFIN1                --------->TOE2(2)                       <---------AtMYB61                           -               <---------ANAC55(2)                     <---------ZAT14                         ------              --------------->AtSPL8                   --------->ZAT14                        -------              <---------------AtSPL3                   --------->ZAT18                        -------              <-------TEIL                            --------->ALFIN1                      ---------           --------->At4g35610    ------->MYC3      <---------ANAC58                 <---------bZIP60(2)           <---------At4g35610    <-------MYC3      <---------ANAC58 <-----------GT1 <---------ANAC46 --------AHL20(2) <---------TOE2(2)         <---------REM1(1)<---------ANAC46<---------AtLEC2 <------   tttttttttttggagctacgtacgataatgaagacatgtgtttgagatgtaagtgagtgtggtgggtgttttcacgtttacatggtgatgtggaaagata  6073800                                                                                               <-----           ---------->DOF2                                                                     <-----         --------->MYB46(3)                                                                   <------        --------->ANAC58                                                                      -------        --------->ANAC58                                                                    ---------       ------>NtERF2                                                                        ---------   --------->ANAC58         ----------->HVH21                                              <---------ARR14(2)   --------->ANAC46         ---------->ARF1                                                --------->ARR11(1)   --------->ANAC58       --------->ANAC46                                                 --------->ARR14(2) ------>TEIL              --------->bZIP60(2)                                              --------->ARR11(3) --->CCA1(2)             <-------MYC3                                                    ----------->ARR10 -->ARR11(1)             ------->MYC3                 --------->DAG2               <---------TOE2(3) -->ARR11(3)         --------->ZAT18                 ---------->DOF2            <---------AHL20(2) -->ARR10<---------MYB55(2)<-----------HVH21    ----------->GT1                 --------->AHL20(2) ---ARR11(3)         <---------ZAT18      ----------->HVH21        ------>ZmHOX2a(1) --------->YAB1<-   tgaacatgccacccaaagtagagtccacatgtcacccagtggaaatgacctcgttaaaagtggtatgtcctccacaattcattttaatgaaaagatttgg  6073900                                                                                            <--------                                                                                            ---------                          <---------ICU4                                            <---------TGA1a                          --------->ATHB12                                          --------->O2                         <---------YAB1                                             <---------O2                         <---------ATHB12                                      ---------->DOF2 -MYB83                --------->YAB1                                          ===============bZIP_DOF -MYB46(1)         --------->ZAT6             ================================================bZIP_DOF ---AtMYB61      <---------DOF5.7(2)          <----------DOF2       <-----------GT1 --------->TGA1a -->MYB111(1)  --------->DOF5.7(2)     <<<<<<<<CAMTA3          <---------AHL20(2)  <----------------- >ARR14(1)    --------->TOE1(3)      --------->ANAC46     <---------TOE1(2)  --------->ANAC46 >CCA1(2)     --------->TOE2(3)      --------->ANAC55(2)  <---------TOE2(2)  --------->ANAC58 -----NtERF2<---------TOE1(2)      <-----------GT1   --------->ANAC46        --------->ANAC58   <----   tggcatctcgatcgaacgttaacactcatcattcgattcacgcgttttcttttacacgcgtatgttttattctctatacaagaaagacgtctcagagtta  6074000                                                                        >>>>>>>>>>GT-3b                                                                     ----------->GT1                                             <---------ZAT6        ---------->DOF2                                         <---------ZAT14     --------->GLK1(2)    ------>NtERF2                        --------->ZAT14    --------->ARR14(2) -ZAT6       --------->YAB1    <---------ANAC58             <---------ARR14(2) -->GT1<---------MYB59         <---------ANAC46             <---------GLK1(2) ------TaNAC69(2) --------->CCA1(2)  <------ZmHOX2a(1)   <---------TOE2(3)            ------->TEIL -----AHL20(2) <---------YAB1  <---------ANAC58 <--------P <------ZmHOX2a(1)--------->AHL20(2)   aattgccagcctaattcatgatatggttttgttccttgaggagtttagtggtagtttctgaggattctgaaaagaaaaataaacaatgcatcttgtcata  6074100  Previous    Next  AGI:  At4g09600.1    Description:  GASA3 (GAST1 PROTEIN HOMOLOG 3). Identical to Gibberellin-regulated protein 3 precursor (GASA3) [Arabidopsis Thaliana] (GB:P46687); similar to GASA2 (GAST1 PROTEIN HOMOLOG 2) [Arabidopsis thaliana] (TAIR:AT4G09610.1); similar to GAST-like gene product [Fragaria x ananassa] (GB:AAB97006.1); contains InterPro domain Gibberellin regulated protein (InterPro:IPR003854) Range:  from: 6072801    to: 6073609    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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