Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                     ---------->DOF2             ----------->GT1           --------->DAG2                      --------->YAB1                                     <--          ---------->DOF2                     <---------ATHB12   --------->At4g35610            -----     --------------->AGL15     <----------DOF2<<<<<<<<<ARR2   ---------->DOF2             <----------   acaataacttgaaaaaggaaacaaagtttcaaactttctctatatacaatcaaacccaaataacaaaagctgaacaaattcaaaacccaatttctcaatt  6043400                                                                               <---------ARR14(2)                                          ---------->DOF2                      --------->ARR14(2)        --------->HSFB2a(1)         ----------->GT1                            --------->GLK1(2) -------YAB1                      --------->DAG2              <---------AHL20(2)                  --- ---->YAB1                       ---------->DOF2        --------->AHL20(2)    <---------CCA1(2)  <--- -GT1   <---------HSFB2a(1) --------------->AGL15     <----------DOF2<------ZmHOX2a(2)     <---------   ctaatttggaacatttcaaacaaacaataacttgaaaaaggaaacaaagtttcaaactttatatataaacgatcaaacccaaatctgctattaaggccaa  6043500                                                                          <------NtERF2                                                                     --------->O2                                                               <---------ANAC58                                               <---------ARR11(3)    <---------O2           <---------ANAC58                    --------->ARR11(3) ----------->HVH21 ------>HSFB2a(1)                          ---------->DOF2     <---------ANAC58 ===================== ------ATHB12                          ----------->HVH21       <---------ANAC46 <------ZmHOX2a(1) -ID1      <---------ANAC58          ----------->GT1    ---------->DOF2 <---------DEAR3(1)    <------   agattccacaatttcgttccattacagtaatcgatggaacagtgacaaagaacttactgaaagtggcttcgacgtcgtcgaaggagagagatgtgctgtt  6043600            <----------DOF2                             <---------YAB1    ----------->RAV1(1)                               <-----------GT1  <------ZmHOX2a(2)                     --------->MYB52(1)       --------->MYB52(1)    <----------DOF2 ========HOX2a_HOX2a               --------->ICU4 <---------AHL20(2)              ---------->DOF2 -GAMYB------->GAMYB        ----------->GT1      --------->AHL20(2)    <------ZmHOX2a(2)  ---------->DOF2   accgatcaacagaacttttgcagaaaccaagtgtgaaattagtaacagagataaaattacaatcgaagaacggatcatgttttctaaagctttaaaggaa  6043700                                                                  --------->DAG2            <--------                                         --------->ANAC58        ---------->DOF2<----------DOF2                                         --------->ANAC58--------->ARR11(3) <---------TOE2(3)                 ------->TEIL       ---------->DOF2   >>>>>>>>>TBF1         <---------TOE1(3)   tcgaagtaacccaaaaatgaatatttgtatcggaagagaaaagaagcaaattggaagaagaaattgaaaaagtattttagggttttaatggaagattata  6043800                                                                          --------->ATHB51                                                                          <---------ICU4                                                                         --------->ICU4                                                                         <---------YAB1                                                                       <--------HAHB4                                                                       <---------ICU4                                                           <------------CBF <---------YAB1                                                       --------->HSFB2a(2)--------->AHL20(2)                                                       <---------HSFB2a(2)<---------AHL20(2)                                                    --------->ARR11(3) --------->YAB1      --------->At4g35610                           <---------ARR11(3)--------->ICU4   <---------AHL20(2) -YAB1<---------At4g35610            *TSS           <---------ARR14(2)--------->AHL20(2)   aacacttgagcttccatagaaggcgagttaagagaccagagactatgaagagaatatctagaattgttcagaataattattttttgtttttattttggtt  6043900                   <------------CBF                                       <---------ICU4                  <---------ICU4                                     <---------AHL20(1)                  --------->ATHB12                                  --------->YAB1                  <                  -------->ATHB1                                  --------->AHL20(2)                <                  --------->ATHB51                             --------->TOE2(3)              -------                 <---------ATHB51 --------->ANAC46             --------->TOE1(3)              -------                 --------->ICU4 --------->ANAC58            <------ZmHOX2a(1)                 <------                 <---------YAB1 --------->ANAC58        ---------->DOF2--------->AHL20(2)   <--------     <---------MYB52(1)        ------->TEIL        <---------At4g35610<---------AHL20(2)    --------- <---------At4g35610       --------------->AtSPL8  --------->At4g35610--------->AHL20(2)    <--------   tacagcagttaactttggaattattgcgaaatgtacccaaaacatttgttttctgctaaaaaggaccttaaaataattttcacatgaaaaacaaaatatt  6044000                                                                                <---------AHL20(2)                                                                           --------->AHL20(2) <----------DOF2                    <---------------AGL15                  <---------AHL20(2) ---------ANAC58                    --------------->AGL15            <-----------HVH21 ---------ANAC58                   <-----------------AGL2         --------->ALFIN1           <------- -->AHL20(1)                       <-----------------AG         <---------O2    --------->AHL20(2) -->ARR11(3)                <---------ANAC55(2)                 --------->TGA1a <---------AHL20(1) ---AHL20(1)                --------->ANAC55(2)                 <---------TGA1a --------->AHL20(1) -ARR11(3)                <-----------GT1                       --------->O2--------->AHL20(2) >AHL20(1)          --------->DAG2 <-----------------AGL3    <---------ATHB12  --------->AHL20(2)   < -AHL20(1)         ---------->DOF2 <-----------------AGL1   <-----------HVH21  <---------AHL20(2)   <   ttgctttgcccaaacaaaaaaaaaagtattacatattgctgattttgggaaaacatttgtccagtcatgtgtgtcaaataaataaatttccgattatgaa  6044100                                                                                                    -                                                                                             <-------                             ----------->GT1                               <---------YAB1 <---------AHL20(2)                        <---------AHL20(2)                               --------->YAB1<---------AHL20(1)     ----------->GT1    --------->AHL20(2)                         >>>>>>>>>>WRKY6     <---------ARR11(3) --YAB1     <---------ICU4   --------->YAB1                        >>>>>>>>>>WRKY11    --------->AHL20(1) ---------YAB1        --------->CCA1(2)             <---------ICU4--------->WRKY45     --------->ARR11(3) ---------TOE2(3)    <---------ARR11(3)      ----------->GT1      --------->WRKY38(1) <---------AHL20(2)   ttatggatggctaattagttcaagatttaaatagtaatacagtaatctggtgaaatattacaaataagttgactaacataatagctaaatatttttttct  6044200                                                                                       --------->AHL20(2)                                                                              <---------AHL20(2)                                                             <---------AHL20(2)       --------->AHL20(2)                                                             <---------AHL20(1)    <---------AHL20(2)                                                             --------->AHL20(2)    --------->AHL20(1)                                                     <---------ANAC46         <---------AHL20(1)                                              --------->ATHB51                --------->AHL20(2)                                              <---------AHL20(2)              --------->AHL20(1)                                              --------->AHL20(2)           --------->YAB1   <--------                             --------->ARR14(2)     <---------TOE2(3)    <---------YAB1<---------AHL20(2)                             --------->GLK1(2)--------->ATHB12  --------->AHL20(2) --------->AHL20(2)     --------->ICU4          <---------ARR11(3)   ----------->HVH21   <---------YAB1  <---------AHL20(2)  <---------AHL20(2)<---------PCF5           <---------AHL20(2) <---------AHL20(2) <---------AHL20(1) -------->ANAC55(2)<---------ZAT18     ----------->GT1       --------->AHL20(1)   <---------AHL20(2) ----GT1           --------->ZAT18   ----------->GT1---------->ID1  --------->ZAT6--------->AHL20(2)   atatgtaattgtgagcaattgtggaccacaaaatctgaaacgagaaaattatttgacgtttaatattttaatactattaataaaataaattaatatgatt  6044300  Previous    Next  AGI:  At4g09560.1    Description:  peptidase/ protein binding / zinc ion binding. similar to protease-associated zinc finger (C3HC4-type RING finger) family protein [Arabidopsis thaliana] (TAIR:AT1G71980.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO15460.1); contains InterPro domain Protease-associated PA (InterPro:IPR003137); contains InterPro domain Zinc finger, RING/FYVE/PHD-type (InterPro:IPR013083); contains InterPro domain Zinc finger, RING-type; (InterPro:IPR001841) Range:  from: 6041339    to: 6043837    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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