Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                      --------->GLK1(2)              ---------->DOF2                                       <---------ARR11(3)     <---------ANAC58                                               --------->ARR11(3)     <---------ANAC58       ---------->DOF2                        --------->RVE1(1)     --------->ANAC55(2)  --------->YAB1                        --------->YAB1     <---------ANAC46    <---------ATHB12                      --------->AHL20(2)     <---------ANAC55(2)------>MYB46(1)                    <---------YAB1    <---------TOE2(3)  --------->WOX13(1)                ----------->GT1   <-----------GT1 <-----------GT1                       --------->YAB1                          ---- ----DOF2 <---------ZAT6------>MYB83                    <---------YAB1    --------->ZAT6        -----   aagttttacgtagtcttaaagttaccaatcaaaagcacattgaactaatattcaacatatgataaataaaaatcttacactcgtagttcgtagttgaata  6029300                            <-----------GT1                    --------->YAB1                                                   <---------ANAC46         <---------------AtSPL8                                <-----------GT1  <---------At4g35610         --------------->AtSPL8                      <---------ANAC55(2)   --------->WOX13(1)         --------------->AtSPL3                      --------->ANAC55(2) <---------YAB1         <---- ----->DAG2        <---------YAB1   <-------TEIL    <-------TEIL       <-----------GT1        <------ ----->DOF2  <-------TEIL --------->AHL20(2)       --------->CCA1(2)  <---------AHL20(2)      -------   aagttagcatataagtacattataagaattaaaccatattcatacaatatgagatacataacatataaccattttatcattcagacgacgtagtagtggg  6029400                      ------>ZmHOX2a(1)                          --------->bZIP60(1)             <---               <---------ANAC58                                  <---------bZIP60(1)             ----    ----------->GT1   --------->ICU4                   ---------->DOF2                       <------- -----PCF2     <---------bZIP60(2)                   <---------HSFB2a(2)--------->ANAC58    --------- ---ZAT18      <---------ANAC58                    <---------LBD16      --------->ANAC46   --------->LBD16 -->ZAT18      <---------ANAC46     <------ZmHOX2a(1)--------->HSFB2a(2)--------->ANAC58  <---------LBD16   ctcatatagttaatgtgacttgtcctgatgagaagtcaggaacatgacaagacttcggaaagtagagacatcacaaggcaatacaatcttgtcccggtga  6029500                                                                                   --------->HSFB2a(1)             <---------GLK1(1)                                                    ------->TEIL             --------->GLK1(1)                                                    <-----------ARR10          <---------MYB59                                                         <---------ARR11(1)         <------------MYB.PH3(1)                                                  <---------ARR14(2)       --------->MYB52(1)                                                         --------->ARR14(2)       --------->ARR14(2)                                                         --------->GLK1(2)      ----------->HVH21                                                          <---------CCA1(2)    --------->ANAC46                                                           <---------ANAC55(2)   --------->LBD16              --------->HSFB2a(2)                            --------->ANAC58  <---------ANAC46              <---------HSFC1(1)                             --------->ANAC55(2) <---------LBD16        <------NtERF2                                          --------->ANAC58 ------At4g35610     ------>NtERF2                                          <------ZmHOX2a(2) ----->At4g35610  ------>ZmHOX2a(1)    <----------DOF2                --------->ALFIN1 ----HVH21------->GAMYB--------->RAP2.6(2)--------->HSFB2a(2)         <---------ANAC46           <<<< >LBD16<---------ARR14(2)       <---------HSFB2a(2)               ----------------------->TaNAC69(2)   gcttccgcgtaaccgaattcctcggccgcattgtctagaagcttttggaatgaagggctcttcaaaaacgttgtggggatcacgaatctttccaacttct  6029600                                                                <---------ARR14(2)                                                                <-----------ARR10                                                                <---------ARR11(3)            <------               <----------ID1                                   --------->ARR11(3)            <------             <---------DOF5.7(2)                  ------>ZmHOX2a(2)                           <------         <---------ANAC46                       <-----------ARR10                    <---------LBD16      --------->DEAR3(1)                        <---------ARR11(3)                  <---------ANAC58     --------->DEAR3(2)                         --------->ARR11(3)        <<<<<<<<<TBF1      <-------TEIL    --------->SPL7                          <------ZmHOX2a(1)   --------->ARR14(2)  <---------ANAC46  <---------SPL7     ---------->DOF2        =============HOX2a_HOX2a   <<<<<<<<<TBF1<---------ANAC58 <<<<<TBF1 --------->DOF5.7(2)            <---------TOE2(3)    <---------CCA1(2) <----------DOF2    -   tcttcgtaccgacgtaaacgacgaaatgccctctcggtgttcttgaggatgatctactctcaccagtatcttcttcttcttctctttcgtggaagtgcat  6029700                                                                                                <----                                                                                                -----                                                                          ===========================                                                                          <------ZmHOX2a(1)     -----                                                                     --------->WRKY18(1)        <----                                                               --------->ALFIN1                 <----                                                             <------MYB46(1)               <---------ANAC46                                                             <---------ANAC58            <---------ANAC46                        <---------------AGL15                <------MYB83 ===========================    --------->ARR11(3)  --------------->AGL15               --------->MYB55(2)       <---------ARR14(2)  ----------->HVH21    <---------ANAC55(2)                  <---------MYB46(3)       <---------GLK1(2) ---ANAC58    <------NtERF2           <-----------TBP      <---------ANAC46          --------->ARR14(2) ---AtLEC2  <---------RAP2.6(2)    ----------->GT1      <-----------RAV1(1)     --------->MYB52(1)--- ---ANAC58 <---------LBD16 ----------->TBP    --------->ZAT18<---------ANAC46   <---------DOF5.7(2)<- -------->WOX13(1)     <---------ANAC46       <---------ZAT18<---------ANAC58 --------->DOF5.7(2)<---   gtcaatgaccttgtgcggcatagttacctatataagcttgttatatagtgacctatttgtgttgggtgtgagtcaaggacattaacggattttgtgggga  6029800                                       <-----------TBP                                     --------------->AGL15                                     <---------------AGL15                                    <-----------------AGL2                                    ----------------->AGL3                                    ----------------->AGL2                                    <-----------------AGL3                                   ------>MYB83                                   ------>MYB46(1)            <----------DOF2      <---------MYB111(1)      <-----------GT1            <---------MYB46(2)                                             ----- -----ARR14(2)                   --------->TOE1(2)                                             ------ ---->ARR11(3)              <---------ANAC58                                                   ------ ====HOX2a_HOX2a            <------MYB83                                                      ------- ---->ARR14(2)              <---------ANAC58                                               <---------ANAC58 -----ARR11(3)              <------MYB46(1)                                      <---------ANAC46 -----ARR14(3)             --------------->AtSPL8                                <---------ANAC58<--- ===HOX2a_HOX2a            <---------MYB46(3) <---------------AtSPL8          >>>>>>>GRF7  <---------ANAC58 --->ZmHOX2a(2)            <---------------AtSPL8                          <-----------HVH21  <------ ---------DOF2             --------->MYB59    --------------->AtSPL8    <----------DOF2    --------->ALFIN1 ---ZmHOX2a(2) --------->ATHB12  <---------MYB59               <---------AHL20(2)<---------ANAC58----   tctttgtgtttccactttgatttggaagttgggtacctactatatatagttgtacatacttatattttatatttctttgtcaggcttggagatgtgtgcc  6029900                                                   --------->AHL20(2)                                                   <---------AHL20(2)                                                --------->AHL20(2)                                                <---------AHL20(2) ---->DEAR3(1)                                 <---------AHL20(1) --->DEAR3(2)                                  --------->AHL20(2)                         ----------- --->ORA47(2)                                  <---------AHL20(2)                         <----------ID1 -->At4g35610                              --------->AHL20(1)                           ---------->DOF2 ------RAP2.6(3)                           --------->AHL20(2)                    --------->At4g35610 ---At4g35610            <---------TOE1(2) <---------AHL20(2)                 --------->At4g35610 -->NtERF2               <---------TOE2(2)--------->AHL20(2)                  <---------At4g35610   gactagaatgcattcacttagttttcatatgttttagacacaaaattaattaatttataagaaaaaaaaactaaaatagaagctgatgcaaaaagaaaaa  6030000                                                                       <------ZmHOX2a(1)                                                                      <------MYB46(1)                                                               <xxxxxxxxxxxxxxxxsmallRNA(i)                                                              <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                                                             <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                                                             <xxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                                                             <xxxxxxxxxxxxxxxxsmallRNA(s)                                                            <---------RAP2.6(3)                                                            <---------ATERF1(1)                                                            <---------ALFIN1                                                            ------>NtERF2                                                           --------->RAP2.6(2)                                                           --------->DEAR3(1)                                                           ----------->HVH21                                                           --------->DREB2C(2)                                                           xxxxxxxxxxxxxxxx>smallRNA(i)                                                           <---------ETT(2)                                                          --------->DEAR3(2)    --------->ZAT14                                                          --------->SPL7   <---------ABI4(2)                                                          xxxxxxxxxxxxxxxx>smallRNA(i)                                                         <xxxxxxxxxxxxxxxxsmallRNA(i)                                                         ------>NtERF2xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                                                         <---------At4g35610    <---------ZAT14                                                        <xxxxxxxxxxxxxxxxsmallRNA(i)                                                       <---------RAP2.6(2) --------->ZAT18                                                     <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                                                    --------->ARR14(2)xxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                                                    <---------ARR14(2)xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(s2)                                                --------->At4g35610   <------MYB83      ---------->DOF2                                             --------->RAP2.6(3)    <xxxxxxxxxxxxxxxxxsmallRNA(le3)                                             <xxxxxxxxxxxxxxxxsmallRNA(i) --------->ANAC58                                            --------->MYB52(1)<---------ZAT2   --------->DEAR3(1)                                            --------->ARR14(2)--------->ZAT2  --------->DEAR3(2)                                            <---------ARR14(2)xxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                                        <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3) --------->ANAC58                                       xxxxxxxxxxxxxxxx>smallRNA(s) <--------P--------->ANAC58                        <----------DOF2xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3) ------->TEIL      <-----                      ---------->ID1  <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)--------->ANAC58 xxxxxxxxxx                     <-----------GT1<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)       <---------At4g35610          xxxxxxxxxxxxxxxx>smallRNA(i)  <xxxxxxxxxxxxxxxxsmallRNA(i) <----- >GT1  --------->At4g35610       <---------YAB1 <---------At4g35610<xxxxxxxxxxxxxxxxsmallRNA(s)------   aaaaacttcatctccattttgtttttctttttgtttttatagaccctatcggctgattcggccgacctcggtaggaacgcaccgaagtgctaaagagtgg  6030100                             --------->ZAT14                             <---------ZAT14                            <---------ALFIN1                           <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                           --------->MYB46(3)                           --------->bZIP60(2)                           --------->ANAC46                                                     <----                          ------>NtERF2                                                         -----                        xxxxxxxxxxxxxxxx>smallRNA(s)                                    <---------AtLEC2                  <xxxxxxxxxxxxxxxxsmallRNA(s)                                         ------>NtERF2                 <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                <xxxxxxxxxxxxxx         xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)                                        <xxxxxxxxxxxxxx ----ZAT14   --------->REM1(2)<---------ALFIN1                                      <xxxxxxxxxxxxxxxx xxxxxxxxxxxxx>smallRNA(fl3)xxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                     <xxxxxxxxxxxxxxxxsmallRNA(s) ----ZAT18  --------->AtLEC2--------->AtMYB61                                 <xxxxxxxxxxxxxxxxsmallRNA(s) --->ZAT18 <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                             xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)   acttcttcaaatccatgtagaattgggccaccacactgcctcattcgagtttagaatgttttccgactaatgctatggaatagtcaggctgcctggcaaa  6030200  Previous    Next  AGI:  At4g09530.1    Description:  auxin-responsive family protein. similar to auxin-responsive protein, putative [Arabidopsis thaliana] (TAIR:AT3G20220.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN71368.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO15892.1); contains InterPro domain Auxin responsive SAUR protein (InterPro:IPR003676) Range:  from: 6029410    to: 6029721    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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