Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                               --------->CCA1(2)                                                             --------->GLK1(1)                                                    --------->GLK1(2)                                                   <---------GLK1(2)                                                   --------->ARR14(2)                                   ----------->RAV1(1)      --------->ARR11(3)                          --------->ARR14(2)       --------->ARR11(3)                            ----                          ------>MYB83             <---------ARR11(3)                            ----                          <---------ARR14(2)       <---------ARR14(2)      ---------->DOF2       ----         ------------>CBF ------>MYB46(1)        ----------->ARR10<---------At4g35610        --------      <------------CBF  <---------MYB59        ---------->DOF2    --------->At4g35610        --------    <---------YAB1   <---------WRKY18(1) ----------->HVH21  <---------ARR11(3)           <-----------HVH21   agtcttcttattgcaatctctcttgacctatcttcaacaacatttgacacaaagattctcaagatatcaactgatgacaaagtcttcaaatggtcacaca  5982900                                                <-----------RAV1(2)     ------->TEIL                            --------->ANAC58  --------->ANAC58                   <---------TOE2(3)  <---------MYB52(2)           <---------ARR14(2)                                            <-------  --------->ANAC58          <---------ANAC58 ----------->HVH21         ------>ZmHOX2a(1)     -------- ----->ANAC58            <----------DOF2     --------->ANAC58   <----------DOF2      <-----------ARR10 ----->ANAC46        --------->YAB1--------->LBD16            <---------ZAT2         --------->GLK1(2) ----->ANAC58 --------->At4g35610  ------>ZmHOX2a(1)   --------->At4g35610           --------->ARR14(2) ->ANAC58     <---------At4g35610----------->RAV1(2)   <---------At4g35610           <---------ARR11(3) ->ANAC58<---------GLK1(2)  <---------ANAC58 --------->ANAC46 --------->ZAT2   <-----------GT1   agccacgaacatattctgctccatcatctttcgtttcctgaggtttcacgacaggtttgctcacagctttgtcctgtgttttaacaaaatctgactatac  5983000                                                                                            <--------                                                                                            ---------                                             --------->GLK1(2)                             <---------YAB1                                          --------->AHL20(2)                              <----------                                --------->ARR11(3)                                       -------->ATHB1                                <-----------ARR10                 --------->ZAT14        --------->ATHB51                                <---------ARR11(3)        <---------ARR11(3)             --------->YAB1     --------->ARR14(2)       <---------AHL20(2)          --------->GLK1(2)             <---------YAB1    ------>ZmHOX2a(1)       ----------->TBP<---------AHL20(2)     <---------ZAT14    ------------>ATHB5 --ZAT14             <-----------GT1     ----------->TBP  --------->ARR14(2)  --------->ARR14(2) ->ZAT14       <---------YAB1--------->AHL20(2)           <-----------ARR10  ------>ZmHOX2a(1)  <----   tatttcctatatgccctattatttctccctataaaatctccctataaaatctgactacaaaatctgactatactatttcctatatgccctattattgtta  5983100  <---------AHL20(2)                                  ----------->GT1 <---------AHL20(2)                        ----------->HVH21 --------->AHL20(2)          <-----------GT1          --------->ANAC58 -ZAT6       <---------ARR14(2)         --------->GLK1(2) -->GT1      <---------MYB52(1)       <---------AHL20(2)                        ------------>CBF --CBF       --------->ARR14(2)     ----------->TBP   --------->ANAC58--------->YAB1 -----AHL20(2)         <---------YAB1--------->AHL20(2)          ------------>CBF                  <-   aattttaatttgtccgataggccctattatttctccctataaaatctgactggaacaagaaaaaaccctcaataacaaaaccctcaatatttccttcaac  5983200                                        ------>ZmHOX2a(2)                          ------>ZmHOX2a(1)                          =====================HOX2a_HOX2a                          ====================HOX2a_HOX2a                                <---------ZAT18                         --------->TOE2(3)                                          --------->LBD16                      --------->GLK1(2)--------->GLK1(1)                            <---------ZAT14                     <---------GLK1(2)--------->ARR14(2)                           --------->ANAC46           <---------ANAC46           <---------ARR11(3)                          <---------LBD16           <---------ANAC58    <----------DOF2                                  --------->ARR14(2)           <---------ANAC58<---------CCA1(2)                                    <---------ARR14(2)       <---------ANAC58  <---------ANAC58                                     <----------DOF2       <---------ANAC58  <---------ANAC58         <-----------GT1           <------NtERF2<---------ZAT14    <-----------GT1 --------->At4g35610<------ZmHOX2a(2)                    ------>NtERF2--------->ZAT14 -----------CBF   --------->YAB1   --------->HSFB2a(2) <----------DOF2    <---------RAP2.6(2)      <-   taattgtttccttgcttctatcagattccttatctttcgcgatctccagttttctctctttttcttagatactatggccgcgtttccgcagtggacaagg  5983300                                                 --------->DEAR3(1)                                             <-------TEIL                                           <---------ARR14(2)                                           --------->ARR14(2)                                          <---------HSFB2a(1)                                          --------->HSFB2a(1)                              ----------                                      --------->LBD16                                    --------->LBD16                                     --------->LBD16                                  --------->MYB52(1)                                 <---------ARR14(2)      --------------------->WRI1  <---------ARR14(2)                                 --------->ARR14(2)    <---------AHL20(2)            --------->ARR14(2)                          --------->At4g35610--------->SPL7                       --------->LBD16----                     --------->At4g35610  --------->HSFC1(2)                     --------->HSFB2a(2)                     <---------At4g35610  <---------HSFC1(2)                     <---------HSFB2a(2)- --------MYB46(3)   --------->MYB59 <---------LBD16   --------->AHL20(2)        <---------LBD16 <----   gtcgatgacaaacgttttgagttagctctgcttcaaatcccggagggttcgccgaattttatagagaatatcgcctattatctccagaaaccggtgaagg  5983400                      <---------MYB46(3)                                                <---------ANAC58                      <---------DEAR3(2)            <--------P                          <---------ANAC55(2)                      <------MYB83            <---------ARR14(2)                        <---------ANAC46                      <------MYB46(1)         --------->ARR14(2)                        <---------ANAC58  <---------------AtSPL3                  <------ZmHOX2a(2)                   --------->SPL7       --  --------------->AtSPL3                 --------->ARR14(2)                 --------->LBD16        --  --------------->AtSPL8      --------->ARR11(3)   <---------MYB52(1)      --------->ANAC58      ----  <---------------AtSPL8     --------->YAB1------>ZmHOX2a(2)               --------->ANAC46     ----- ->HVH21             <---------AtMYB61   <-----------ARR10                 --------->ANAC58     ----- ----->ALFIN1      <-------GAMYB         <---------ARR14(2)               <---------LBD16      <----- -------->ALFIN1<---------ANAC46     <---------At4g35610              --------->ARR14(2)--------->ANAC55(2) --ZmHOX2a(1)  <---------LBD16<---------ARR11(3)  ----------->GT1     <---------ARR14(2)<---------ANAC55(1)   aggtggagtactactactgcgcgttggtccatgatattgagcggatcgaatcgggtaagtatgttttgcccaaatacccggaagacgattacgtgaaact  5983500       --------->ZAT2       --------->At4g35610       <---------At4g35610                                                              --------->YAB1     <-----------RAV1(2)                            --------->At4g35610            <---------YAB1 ------->ANAC58                                     <---------At4g35610     --------->YAB1 ------->ANAC58                             <---------ANAC58                <--------ATHB1 ----->MYB52(1)                             <---------ANAC58               <---------ATHB12      <--- ------>TGA1                  ---------->DOF2   <-----------HVH21       <---------WRKY38(1)<---------GLK1(2) ------>HVH21             <----------ID1--------->GLK1(1)          <--------P   <---------AHL20(2) ----MYB52(2)            ----------->GT1<---------GLK1(1) <------ZmHOX2a(1)--------->ICU4  <---------ICU4   gacggaagcaggtgagtctaagggcaatgggaaaaagacgggaattccttggtcagaagaggaacagaggttagtcaatgattttatgaataagaatttc  5983600                                                                         <-------GAMYB                                                                        <------MYB83                                                                        --------->MYB55(2)                                                                        <------MYB46(1)                     <---------TOE1(2)                                  <---------MYB46(3)       <---              --------->DAG2                                        <-----------RAV1(1)          ----      <---------ANAC46                                        <---------TOE2(3)         <---------ZAT14 -------DOF2 ---------->DOF2        <---------AHL20(2)        <---------TOE1(3)     <------ZmHOX2a(1)   tttggattgtggagataaagtcccaagtttaagagttttaaattttgctagggtttgatgaattagggttttgttggttagggctaggagtaaacttata  5983700                                   <---------HSFB2a(2)                            <-------TEIL                         --------->ANAC58                         <---------ANAC58                         --------->ANAC55(2)                         <---------ANAC55(2)                    --------->ALFIN1                    <---------------AtSPL3         <---------TOE1(2)<---------SPL7         <-------TEIL   --------->SPL7         ------->TEIL   <---------------AtSPL3         <---------TOE2(2)--------->TOE1(2)         --------->SPL7 <-------TEIL       <---------SPL7   --------------->AtSPL8      --------->ANAC58  --------------->AtSPL3      --------->ANAC55(2)<---------ANAC58      --------->ANAC58<---------SPL7      <---------ANAC55(2)--------->ANAC58     --------------->AtSPL8 ------->TEIL                     --------->ICU4     <---------------AtSPL3 <---------TOE1(2)                <---------YAB1     <---------------AtSPL8 --------->SPL7     ----------->GT1--------->ATHB12                   ----     --------------->AtSPL3 <---------TOE2(2)  <---------MYB46(3)                            <------- ------AHL20(2)     <---------------AtSPL8 --------->ATHB12--------->YAB1        <---------REM1(1)  - ----->AHL20(2)  <---------TOE2(3) --------->HSFB2a(2)  ------>ZmHOX2a(1)      --------->At4g35610---   tatatatcacgtacgtttttaggtggtacgtacgtttttagaaaaacattggttaatcctctcatgatttgatttggaattagatgaaggcgaaaacgaa  5983800  Previous    Next  AGI:  At4g09450.1    Description:  myb family transcription factor. similar to myb family transcription factor [Arabidopsis thaliana] (TAIR:AT3G10580.1); similar to myb family transcription factor [Arabidopsis thaliana] (TAIR:AT3G10580.2); similar to syringolide-induced protein 1-3-1A [Glycine max] (GB:BAB86892.1); contains InterPro domain SANT, DNA-binding; (InterPro:IPR001005); contains InterPro domain Homeodomain-like (InterPro:IPR009057); contains InterPro domain Myb, DNA-binding (InterPro:IPR014778); contains InterPro domain Myb-like DNA-binding region, SHAQKYF class (InterPro:IPR006447) Range:  from: 5983274    to: 5984528    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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