Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                          <-----------HVH21                       --------->REM1(1)                    --------->bZIP60(2)                       --------->bZIP60(2)                  --------->bZIP60(1)                       <---------bZIP60(1)                  <---------bZIP60(1)                       --------->bZIP60(1)                  --------->REM1(1)                      <------NtERF2                        <------NtERF2                    --------->bZIP60(1)                  <---------bZIP60(1)                    <---------ETT(2)                     --------->ETT(2)                    --------->ETT(2)                     <---------ETT(2)                    <---------bZIP60(1)                  --------->bZIP60(1)                   --------->ATERF1(1)                  --------->ATERF1(1)                   <------NtERF2                        <------NtERF2                  <---------ATERF1(1)                  <---------ATERF1(1)                      -----                 <---------DEAR3(1)                   --------->ALFIN1                          -----                 --------->ALFIN1                     <---------DEAR3(1)                        -----                --------->ATERF1(1)                  --------->ATERF1(1)                      <------               <---------bZIP60(2)                  <---------bZIP60(2)                  xxxxxxxxxxxx              --------->ALFIN1                     --------->ALFIN1                      <------ZmHOX2a(1)             <------ZmHOX2a(1)                    <------ZmHOX2a(1)                    <---------TOE1(3)           <---------TOE2(3)                    <---------TOE2(3)                      <---------TOE2(3)       <---------ZAT2------>NtERF2          <---------ZAT2------>NtERF2            <---------At4g35610       --------->At4g35610                  <---------At4g35610                    <---------ZAT2       <---------At4g35610                  --------->At4g35610                    --------->ZAT2       --------->ZAT2----------->RAV1(1)    --------->ZAT2----------->RAV1(1)      --------->At4g35610   ttttaggcgagctaaggaggtggcgacatcaggtctggtttaggcgagctaaggaggtggcgacatcagaagtctgttttaggcgagctaaggaaattac  5970500   --------->ALFIN1  <-------MYC3  <-------PIF5  ------->MYC4  <-------MYC4  ------->MYC2  ------->PIF5  <-------MYC2  ------->MYC3 <---------ANAC46           <---------CCA1(2) ===========================================MYC_MYB <---------ANAC55(2)  --------->ANAC58 <---------TGA1a      --------->ANAC58 --------->TGA1a   <---------ZAT2   ------->GAMYB --------->O2      <---------At4g35610 <---------O2      --------->ZAT2  --------->ANAC58 ---->ANAC58       --------->At4g35610 ---->ANAC46    ------>ZmHOX2a(1)  --------->ANAC58                                           ------- ---->ANAC58   --------->TOE2(3) --------->MYB52(1)    <---------ZAT2                        <------- -----GT1 <xxxxxxxxxxxxxxxxsmallRNA(s)             --------->LBD16                    <---------At4g35610 xxxxxxxxxxx>smallRNA(se3)<---------ALFIN1<-----------GT1                 <----------DOF2 <---------MYB52(1)   gacacgtggagcaatctccttagctcgcccatctctaacggaattatctcttccgagagctcgtcttcttctgtttctttaagtactcatctgttatctt  5970600                                                                       ---------->DOF2  <---------At4g35610     <---------YAB1                                              <xxxxxxxxxxxxxxxxsmallRNA(s)  <---------YAB1 ---------->DOF2                            <------------CBF            --------->At4g35610 -->TOE2(3)    <---------AHL20(2)                        ------------>CBF  --------->ARR11(3) --YAB1--------->KAN4(2)                             xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)   agttctgattattcgatttaaaagtgtattgaatcgagagagagtaagagagagaagagaacaattgtagagagaaagagctcgagtttgagctaagtgt  5970700                               <---------SPL7                              <---------O2                            <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                    --------->ANAC55(2)                       <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                   <----------DOF2                      xxxxxxxxxxxxxxxx>smallRNA(s)                         <---------CCA1(2)                      xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)               <---------ANAC58                      <---------DEAR3(1)                                --------->SPL7                     <---------LBD16                  xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                    xxxxxxxxxxxxxxxx>smallRNA(s)   <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)           --------->LBD16  <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)     --------->LBD16          <---------ANAC46 <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)     <---------ANAC58          --------->HSFB2a(2) <---------TGA1axxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3) <---------TOE2(3)          <---------HSFB2a(2) <---------ANAC46   ------>NtERF2       <---------ANAC58         <---------LBD16  <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(s2)--------->AHL20(2)  <-----------GT1 ---      <---------GLK1(1)--------->LBD16  <---------ALFIN1  ----------->GT1<---------ANAC58         <--      --------->GLK1(1)------>NtERF2 <---------TCP20xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)    <-------   ttttagtgaattccggagacatctccggcgagacgtagggttccacatcggagcctgaactcgataaattcccgtgcgtctcttttacgttttttctttg  5970800                                                                            --------->ARR11(3)                                  ------------>CBF                 -------->P                       --------->TOE1(3)                          ------->GAMYB --------->YAB1                    <---------ARR14(2)                           <---------MYB111(2)              --------->ANAC58   <------ZmHOX2a(2)      <-------TEIL        <---------ARR11(3)              --------->ANAC58   <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)      --------->AHL20(1)     ------>ZmHOX2a(2)----------->RAV1(2)           <---------TOE2(3)     ------->TEIL    <------ZmHOX2a(2)--------->GLK1(2)              <---------TOE1(3)  <---------YAB1          ------ ------>ARR14(2)    --------->ARR14(2)           <-------TEIL    <---------MYB55(2)        <---------ZAT14 -------ARR14(2)    <---------GLK1(2)        <---------TOE1(3)   --------->MYB46(3)        --------->ZAT18 ---DOF2   <---------ATHB12     <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)--------->YAB1--------->MYB52(1)   aatccgatctcaaatcaagtcagaacctgaaatcgatccaatttctgaaggttcaaggttcacaacaacaaccatgaatatatcgtaacagagagctctg  5970900                                                                                                   <-                                                                                                  ---                                                                                                  ---                             <---------ANAC58                                                     <--                             <---------ANAC58                                        <----------DOF2                       <---------WRKY12                                            <---------At4g35610                       <<<<<<<<<WRKY18                                             --------->ZAT2----                      ------------>CBF                                             <---------ZAT2<---                     <-----------HVH21                                          ------>ZmHOX2a(1)<---                     --------->TOE2(3)        ------>ZmHOX2a(1)      <---------TOE2(1)          -----                <---------HSFB2a(1)       --------->ARR14(2)         <---------TOE1(1)         <-----              <---------ALFIN1         <---------ALFIN1             --------->SPL7 --------->At4g35610 ----->HVH21 <---------At4g35610  ------>ZmHOX2a(1)        --------->WRKY18(1) --------->TOE2(3)<----   acattttttatcttcagcaccttcgtcaatggcttcctcatccacatcctctccaactcgagtcaaggagtacgatgtcttcctcagctttcgaggggcg  5971000         --------->AHL20(2)    --------->LBD16   --------->ANAC46                                        --------->TOE1(3)   --------->ANAC58                                      --------->SPL7   --------->ANAC58                                      ------->TEIL  <---------LBD16                                       <---------CCA1(2) --------ALFIN1                                       --------->ANAC55(2) ------>ARR14(2)                                      <---------ANAC58 ------>SPL7                                          <---------ANAC55(2)                      <----- -------ARR14(2)                                      <---------ANAC58                      <-------- -->NtERF2                                           --------------->AtSPL8                 --------- ------ATERF1(1)                                     --------------->AtSPL3                 --------- ---NtERF2                    ---------->DOF2      --------->GLK1(2)<----------ID1          --------- ------>HVH21      <---------------------WRI1      --------->ARR14(2)                      <------NtERF2 ----ANAC46        --------->At4g35610             <---------ARR14(2)                     ------>NtERF2 -----SPL7         <---------At4g35610         --------->ETT(1)---------->DOF2            -----------   gacacccgcaataacatagtcagctatttgcacaaagcacttgttgatgtcggaatccgtaccttcaaagacgacaaggagcttgaagaaggcgacatca  5971100                                             <--------P                                            <-------GAMYB                                       -----                                           <---------MYB46(3)                                   -----                                          <---------AtMYB61                                    <-----                --------->ANAC46          --------->ALFIN1                                 --------->GLK1(1) ----ICU4       --------->ANAC58        <-----------RAV1(1)                                <---------GLK1(1) -bZIP60(1)     --------->ANAC58      --------->At4g35610                     <------MYB83--------->ARR14(2) >bZIP60(1)  <---------WRKY38(1)      <---------At4g35610                     <------MYB46(1)  ------ >bZIP60(2)  <---------WRKY45      <---------ANAC58                         <--------P    <---------ARR14(2) >REM1(1)    <---------WRKY12      <---------ANAC58            --------->AHL20(1)        <------ZmHOX2a(1) >RAV1(1)  <-----------HVH21  <---------ANAC46<---------MYB46(3)  <<<<<<<<<MYB98 <---------MYB46(3)   tttctgaaaaacttgtcaacgctatacaaacttcgtggtttgctgtggttgttctctcagaaaaatatgttacttcaagttggtgtttggaggaactccg  5971200                                                                            --------->CCA1(2)                                                                     <---------ANAC58                                                                     <---------O2                                                                     --------->O2                                                                     --------->TGA1a                                                              --------->TOE1(3)                                                             <---------HSFC1(2)          --------->HSFB2a(1)                        --------->DAG2  <---------TGA1a          <---------HSFB2a(1)                       ===========================bZIP_DOF  <---------AHL20(2)  <------ZmHOX2a(1)             ---------->DOF2  <---------ANAC58 ->NtERF2<---------At4g35610                     --------->YAB1<-----------HVH21 ------>RAV1(1)     <---------TOE2(3)         =================================bZIP_DOF ----ETT(1)        --------->YAB1   <---------MYB46(3)       --------->HSFC1(2)<---------HSFB2a(2) --->ANAC46<----------DOF2   <---------YAB1   <----------DOF2<---------HSFB2a(1)               <-----   acatataatggagctttccattcaggatgacattatagtcgttcccatcttttataaagtagaaccttcagacgtgagataccagaaaaatagcttcgag  5971300                               --------->GLK1(2)                              <---------GLK1(2)                              --------->ARR11(3)                              --------->ARR14(2)                              <---------ARR14(2)                              <---------ARR11(3)                                       <---------HSFB2a(2)                             --------->HSFC1(2)                                        <-------------                             <---------HSFC1(2)                                        --------------                             <---------HSFB2a(1)       <-----------------AGL1          --------->HSFB2a(2)                    --------->CCA1(2)                  --------->ANAC58               <--------------                    <------ZmHOX2a(2)                  --------->ANAC58               <--------------                   --------->ARR11(3)                  --------->ANAC46               ---------------                   --------->AGP1               <---------ZAT2                     --------->GLK1(1)                   <---------ARR11(3)           <---------At4g35610            --------->ANAC58                   --------->ARR14(2)           --------->At4g35610            --------->ANAC58                   <---------ARR14(2)XXXXXXXXXXXXXXXXXXXX>MIR159B          --------->AtLEC2                  --------->GLK1(1) XXXXXXXXXXXXXXXXXXXX>MIR159A           --------->ANAC58             --------->ZAT14 --------->HSFB2a(1)--------->ZAT2             --------->ANAC58         --------->ZAT6--------->LBD16          <---------GLK1(1)         >>>>>>>GRF7 <-------------- <---------TOE1(3)<---------GLK1(1) XXXXXXXXXXXXXXXXXXXX>MIR159C         <-----------RAV1(2)       <- ----TOE2(3) <---------ZAT14----------->ARR10   --------->GLK1(1)      <-----------HVH21     --------   gttaagcttcagcactacagagatccagagaagattctcaaatggaagggagctctcactcaagttggcaatatgtcaggcaagcatttccagacatggt  5971400  Previous    Next  AGI:  At4g09430.1    Description:  disease resistance protein (TIR-NBS-LRR class), putative. similar to ATP binding / protein binding / transmembrane receptor [Arabidopsis thaliana] (TAIR:AT1G72840.1); similar to disease resistance protein (TIR-NBS-LRR class), putative [Arabidopsis thaliana] (TAIR:AT1G17600.1); similar to disease resistance protein (TIR-NBS-LRR class), putative [Arabidopsis thaliana] (TAIR:AT5G48770.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO65792.1); contains InterPro domain Disease resistance protein; (InterPro:IPR000767); contains InterPro domain Toll-Interleukin receptor; (InterPro:IPR000157); contains InterPro domain NB-ARC; (InterPro: Range:  from: 5970929    to: 5975372    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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