Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                       <---------ATHB12                                            --------->TOE2(3)                      ------>MYB46(1)                       <---------TOE1(2)   --------->YAB1                        <---------MYB59                       <---------TOE2(2) ------>MYB83                   --------->ARR14(2)                    <---------ANAC58     ------>MYB46(1)                <---------ARR14(2)--------->TOE2(3)                    <---------ANAC46   <---------MYB59                 ------>MYB46(1)--------->YAB1                    <---------ANAC58  --------->MYB46(3)               ------>MYB83------>MYB83                 <----------DOF2   ------>ZmHOX2a(1)      --------->ANAC46     ------->TEIL --->ARR11(3) <---------ALFIN1    <---------MYB59         --------->ANAC58  ------>ZmHOX2a(1) -->YAB1    ----------->RAV1(1)  ------>ZmHOX2a(2)        --------->ANAC58----------->RAV1(2)   atagaaacaaaatccaacactttcgtatgttctgatcctaaccaaacataaataaaactcacacaattgaaccaaatcctgaacctaatcaaacttaaaa  5927200                               ------>MYB46(1)                             <---------MYB59                    <----------DOF2                   ------>ZmHOX2a(2)                  <---------RVE1(1)                               <------ZmHOX2a(1)                  <------ZmHOX2a(2)                            <-----------RAV1(2)                 --------->AGP1------>MYB83                    <---------LBD16           <---------YAB1                 --------->ARR11(3)                           --------->TOE1(2)        <-------------                 <---------ARR11(3)                      --------->YAB1       --------->GLK1(2)                <---------GLK1(1)    <-----------ARR10  <---------YAB1        --------->ARR14(2)                --------->GLK1(1)<---------ATHB12      --------->ARR11(3)     <---------ARR14(2)         --------->YAB1    ------->TEIL                <---------ARR11(3)    <---------GLK1(2)  <----   caactaaacaaaaataagagatctttaagaacctaatcaaatctaaacaaaactcaatatcatacccaggatgtctcgcgattctgaaactattagtagt  5927300                  ------>ZmHOX2a(1)                  <----------DOF2             --------->ANAC46             ================bZIP_DOF             --------->bZIP60(2)             --------->ANAC58             --------->ANAC58                                                  ----------->GT1             --------->ANAC55(2)                                             <-----------RAV1(2)             <---------TGA1a                  --------->HSFB2a(2)           <---------ZAT2             --------->O2              --------->TOE2(3)                --------->ANAC58             ================bZIP_DOF --------->YAB1                    --------->ANAC58     <---------ATHB12            --------->TOE2(3)                      --------->ANAC46            -   --------->MYB52(1)            <----------DOF2                       <---------LBD16             -- --------->MYB46(3)    --------->ZAT6>>>>>>>>>MYB98                  <---------REM1(2)            --- --AGL15     --------->TGA1a  <---------ARR11(3)                  --------->DOF5.7(2)    <---------ANAC58 -----ZAT6 <---------ALFIN1  <---------GLK1(2)<---------HSFB2a(2)--------->TOE2(3)       <---------ANAC58   gaaaccaatggagacacgtcctttaacaccagcatctttaacataaatctcgaagtaataagcgaaacgtttacacggagcaggtttattagcttgaaca  5927400         ----------->HVH21  <---------DDF1  ------>NtERF2 --------->DEAR3(1) <---------ETT(1) --------->RAP2.3(3) --------->DEAR4(1) --------->At1g77200     --------->ANAC58                                            ----------->HVH21 --------->DREB2C(2)     --------->ANAC46                             --------->ARR14(2) -------->RAP2.3(1)      --------->ANAC58           <---------LBD16   <---------ARR14(2)        <---- ----->GAMYB   --------->ALFIN1                <---------ANAC58       --------->MYB52(1) ------>ZmHOX2a(2) ------>DEAR3(1)--------->REM1(2)              <---------ANAC58 <----------ID1      <---------MYB52(1)   acgccgacatcgtgaccgtgttgagaaacgccagtgtatttgagagatagcttatcgggagagataactacaaaaccgcttaaaccggtgatcgtgttta  5927500                 <<<<<<<<<TBF1     <---------DEAR3(2)    <---------DEAR3(1)    <---------At1g77200   <---------MYB52(1)   <---------MYB52(1)     --------->DOF5.7(2)  <-----------HVH21 <<<<<<<<<TBF1 -------GT1   <<<<<<<<<TBF1 <---------ARR11(3)                                            --------->AtLEC2   actccgtcggtgattcttcttcttcttcgttatcttccattgtatgtggttttgcagagtgatgaaatttgtgaatgaagttggatttgttcattcaaat  5927600                                         <---------WOX13(1)                                       <---------MYB46(3)                                       --------->ATHB12                                      <---------YAB1                                <---------AHL20(2)                                    <------MYB83                                <---------AHL20(2)                                  <---------WOX13(1)                      <---------ARR11(3)                                 <------------CBF                         --------->ARR11(3)                                *TSS<------MYB46(1)                       <---------AHL20(1)        <---------YAB1          --------->ATHB12                          --------->AHL20(1)   ------       --------->ARR11(3)      <---------YAB1<---------YAB1             --------->ARR14(2)     <-----       <---------ARR11(3)    <---------At4g35610                        <---------ARR14(2)   <-------     ----------->GT1   <---------GLK1(2)<------------CBF    <------------CBF   <---------AHL20(2)----   cgcagagaagataattgaaaccctagaattttgctgattggtgattgattatagagaaacaaaattgttgagcgaatattttttatttttttcaaatgat  5927700                                                                                            <--------                                                                                            <------MYB46(1)                                                                                            <------MYB83                                                                                       <---------TOE2(3)                               <---------AHL20(2)                                      <---------YAB1 --->ARR11(3)            <------MYB83                                               <---------ATHB51 ----ARR11(3)            <------MYB46(1)                                       ----------------->AGL3 --ATHB12               --------->MYB59                     <------MYB83       ====================== -->ZmHOX2a(2)        <---------MYB52(1)-------->ATHB1      <------MYB46(1) --------->GLK1(1)   ctcttacaaaaccatgtgatttcggttcggtttttatttgaattattcggtttttaaaaatttggtttcttagtactggtatccaaattatggatggttt  5927800                                                      ---------->DOF2                                                 <---------------AGL15                                             ------>ZmHOX2a(1)                                            --------->TOE1(3)                                            --------->TOE2(3)           <-----------GT1                                         <---------ARR11(3) --------->HSFB2a(1)                  <------MYB46(1)        --------->ARR14(2) <---------HSFC1(2)            --------->ATHB12  ----------->GT1 <------MYB83           <---------ARR14(2) --------->HSFC1(2)     <----------DOF2 -MYB46(3)       --------->MYB59         --------->ARR11(3) <---------HSFB2a(1)    ------------------ ================================================================MADS_MADS      <-----------GT1   agtatggttttattttggttcggtattgaatgtttatctacaatatccttaatttttaaagaaatttcggttttaaaccatttttctttgtttgatttga  5927900                                               --------->ATHB12                                             <----------DOF2                                           <---------MYB46(3)            --------->DAG2                    --------->ANAC55(2)    <------MYB83                 ---------->DOF2             <                    <---------ANAC55(2)    <------MYB46(1)          --------->AHL20(2)             <-                 <---------ATHB12          <---------DEAR3(2)      --------->AHL20(2)           <----     ------>ZmHOX2a(2)               <---------At5g28300--------->MYB46(3)                     <-----   --------->ARR14(2)  --------->ARR11(3) <---------DEAR3(1)     --------->TOE2(3)             ------ --->WRI1<----------DOF2       <-------TEIL----------->GT1       --------->TOE1(3)          ---------   ttttggatcgacttttcaaatcaagtatctcgattcatttacggtcggtttattggcaacaacttaacattaaaaaaagctaagagttcaaatggttacg  5928000    <------ZmHOX2a(1)  --------->MYB59 ---------MYB52(1) ------GAMYB -----LBD16                                   <------ZmHOX2a(1) ----ANAC46                        <----------DOF2        --------->GLK1(2) ----------->GT1         < --->ANAC55(2)      --------->MYB52(1)      <---------TOE2(3)<---------------AGL15 <---------AHL20(2) >ARR14(2)      --------->WOX13(1) <---------DAG2    --------->ZAT18        <---------MYB46(3) ------   cggttaggacggacaaatctatcaacggtttagactgctttttgtttaggaaaattgcacaatctatacttggaagagttgttatttaagtgtccaaaaa  5928100  Previous    Next  AGI:  At4g09340.1    Description:  SPla/RYanodine receptor (SPRY) domain-containing protein. similar to SPla/RYanodine receptor (SPRY) domain-containing protein [Arabidopsis thaliana] (TAIR:AT1G35470.2); similar to ranBPM-like [Oryza sativa (japonica cultivar-group)] (GB:BAD15463.1); contains InterPro domain CT11-RanBPM (InterPro:IPR013144); contains InterPro domain B302, (SPRY)-like (InterPro:IPR001870); contains InterPro domain SPla/RYanodine receptor SPRY (InterPro:IPR003877); contains InterPro domain LisH dimerisation motif (InterPro:IPR006594); contains InterPro domain CTLH, C-terminal to LisH motif (InterPro:IPR006595) Range:  from: 5924599    to: 5927632    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version