Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                --------->O2                                                              --------->ANAC58                                                              --------->ANAC46                                                              <---------O2                           --------->TOE2(3)         <---------ARR11(3)  --------->CCA1(2)                     --------->YAB1                  --------->GLK1(2)  --------->ARR11(3)          -                   --------->AHL20(2)   --------->MYB52(1)    --------->ANAC58                   ----          --------->MYB52(1)           --------->TOE2(2)   <---------REM1(2)            <----------DOF2 ------>DOF2     <---------ZAT6   <---------AHL20(2) --------->ARR11(3) <---------ARR11(3)      <----   aaaggctcaaaacaacgtagttttaataacctatatataaacatacggtttgcaaaatctatacacgtctaagagatatactataggtgacttttgagat  5923000                           <---------WOX13(1)           --------->AHL20(2)                          --------->GLK1(2)           <---------AHL20(2)             <---------ICU4 <---------AHL20(2)  <---------ARR14(2)     --------->ATHB12--------->AHL20(1)                     --------->YAB1 ------  --------->ARR14(2)    <---------YAB1   <---------AHL20(2)                    <---------YAB1  ------ -------->DEAR3(1)    --------->ANAC55(2)--------->AHL20(2)                   --------->AHL20(2)    - -->ZmHOX2a(2) <-----------GT1----------->GT1--------->AHL20(2)   --------->ANAC58           ------->TEIL --ZmHOX2a(2)  <---------AHL20(2)       --------->AHL20(2)        --------->ANAC58 <-----------GT1---   cgcagacctgcatttatttaacttacatgattgagttacaaaaaaaattacttagagaattttttggcacaaaatccaatttttataactaattgaacct  5923100                                                                  <---------ICU4          <---------ANAC55(2)                                  <---------ICU4         <---------ICU4                                        --------->YAB1        --------->ICU4                                        --------->ICU4      --------->YAB1                                        --------->YAB1      <---------ICU4                                       <---------YAB1     --------->ICU4                                       <---------AHL20(2)     <---------YAB1                                       --------->AHL20(2)                 <-------   --------->YAB1                                        --------->YAB1                      -------- --------->AHL20(2)                                --------->ANAC58                --------->ATHB12 --->TOE1(3)                ----------->GT1        --------->ANAC55(2)        <---------AHL20(2) --->TOE2(3)         <---------MYB52(1)            --------->ANAC58<---------------AtSPL8    -------- -------->YAB1---------->DOF2    ---------->DOF2   ----------->GT1--------->YAB1  <---------YAB1 ------>AHL20(2)    <---------RAP2.6(3)            <---------ANAC55(2)        --------->AHL20(2)   <-   taaaataataataagtaaaagccgttttttttgttaaaagaaggctcaaaacgacgtaattttaataatcatgtacagatttatatgatttgcaaaatct  5923200   ------->MYC4   <-------MYC4   <-------PIF5   <-------MYC2   ------->MYC2   ------->PIF4                                                       <---------ICU4   <-------MYC3                                                      <---------AHL20(2)   ------->MYC3                                                      --------->AHL20(2)   ------->PIF5                                                      --------->ICU4       <---------YAB1   <-------PIF4               --------->AHL20(2)                     <---------ATHB51     <---------AHL20(2) --ARR11(3)            --------->SPL7                   --------->MYB52(2)             <---------AHL20(1) ->GLK1(2)----------->GT1   <----------DOF2             <---------MYB46(3)             --------->AHL20(1) ->ARR11(3)         <---------ANAC58             --------->TOE2(2) --------->YAB1   --------->AHL20(2) --------REM1(2)    <---------ANAC58 <-----------GT1  <---------MYB52(1) <---------AHL20(2)   atacacgtgcaagagttatattgcgaacgacttttaatatcacagtattaatctacgtttgtttgacataaataattaagttgcaaaaaaatattatttg  5923300                             <------------CBF                           <---------AHL20(2)                           --------->AHL20(2)                              <---------ARR14(2)                          --------->AHL20(2)                   --------->ATHB51                  *TSS                      <---------AHL20(1)                       <---------ICU4               ---------                      <---------AHL20(2)      --------->YAB1   <--------ATHB1               <--------                      --------->AHL20(2)      <---------ICU4   --------->AHL20(2)           ---------                   <---------AHL20(1)        --------->ICU4    <---------AHL20(2)           <--------                   --------->AHL20(2)        <---------YAB1   <---------ATHB51             <---------KAN4(2)                   <---------ARR11(3)      --------->YAB1     <---------ATHB12      <---------ZAT6                   --------->AHL20(1)   --------->YAB1        --------->ICU4       <---------TOE1(3)-              ------------>CBF      <---------MYB59       ------------>CBF --------->ARR14(2)--------   tgttttttttatgaagcccaatattttatttaattgggcctaacataataataagggaagcccaataatttgtagcaaatattctagggttagaatattc  5923400                        ------>NtERF2                       --------->ZAT18                       <---------ZAT18                     --------->At4g35610                     <---------LBD16                    --------->ALFIN1                   ------->MYC4                   <-------MYC3                               --------->ANAC55(1)                   ------->MYC2                   --------->TOE1(2)   ------->GAMYB   <-------MYC2                 ------>NtERF2 --------->ANAC58 >KAN4(1)       <---------ANAC55(1)         <-----------GT1   ----------->GT1                    ---- -KAN4(1) <---------TOE1(3)            <----------DOF2        --------->ANAC58                  <---- >HSFB2a(1)----------->GT1          --------->ARR11(3)        --------->ANAC46                ------- -HSFB2a(1)<---------ZAT6           <---------ARR11(3)    --------->YAB1                <----------DOF2 ---------->RAV1(1)------->MYC3  --------->AHL20(2) <---------TOE1(2)    <<<<<<<<<<<<<<<<<LFY<------- ->KAN4(2)<---------TOE2(3)      <---------AHL20(2)------>ZmHOX2a(1)--------->YAB1<---------At4g35610   ttcaacagaattagggttacatgtgcggactctatataaatcttttttgcctcctacgaatcacaagtaataagaaaacaatggagcaaacttttattat  5923500                --------->HSFB2a(2)                <---------HSFB2a(2)              <------NtERF2             ------>NtERF2             <---------SPL7            <---------ANAC58            <---------ANAC58            --------->DEAR3(1)            <---------ANAC46           <------NtERF2          <---------RAP2.3(1)         <---------DEAR3(1)            <---------DAG2         <---------RAP2.3(3)           <----------DOF2        --------->SPL7                <---------DAG2      ----------->HVH21         --------->HSFB2a(1)      ----------->TGA1          --------->HSFC1(2)    ----------->RAV1(2)         <---------HSFC1(2)                     ------>ZmHOX2a(2)  --------->ANAC58              <---------At4g35610                   <---------At4g35610  --------->ANAC58              --------->At4g35610                  <---------ARR11(3) ----->YAB1--------->ATERF1(1)  <---------HSFB2a(1)                  <---------AGP1 -----YAB1------>NtERF2<------ZmHOX2a(1)                         ------>ZmHOX2a(2) -->YAB1--------->RAP2.6(3)--------->ANAC58                    --------->ARR11(3) --YAB1--------->MYB52(1)  --------->ANAC58                    <---------ARR11(3)               <----   gatcaagcctgacggcgtccagagaggactcgtaagcttcccttttctcttaatacatacttgttgatcttgatctgattttggttttgtattcagttct  5923600                                                             --------->At4g35610                                                        <---------bZIP60(1)                                                        --------->bZIP60(1)                                                      --------->ZAT14                          <---------YAB1          ------>ZmHOX2a(2)                    <------ZmHOX2a(2)            <------ZmHOX2a(2)                       <----------DOF2                   <---------ARR11(3)           <---------ARR14(2)                       ============   ----------->GT1 --------->ARR11(3)           --------->ARR14(2)      <---------HSFB2a(2)     ----- ------DOF2    ---------->DOF2            <----------DOF2    <---------At4g35610         ------------   ttggattgtttatacttaaaagatcgatatgtttgtgtttttttctttcagatcggtgaagtcatctgcaggtttgagaagaagggtttcactttgaaag  5923700                                                         ---------->DOF2                                                        --------->AHL20(2)                                                        <---------AHL20(2)                                          --------->ARR11(3)                                  <---------ICU4 --------->ARR11(3)       <---------YAB1             --------->YAB1 <---------AGP1  --------->ATHB12               --------->ICU4  <---------ARR11(3)  <---------ICU4                 <---------YAB1  --------->AGP1         <---------ANAC58 --------->ICU4 ------>MYB46(1) --------->AHL20(2) ----------------->AGL3 <---------YAB1 ------>MYB83    <---------AHL20(2) ------>ZmHOX2a(2)    <---------ANAC58 <---------ATHB12         <-----------GT1 <---------ARR11(3)            <---------ANAC46         ---- ====================================================================MADS_MADS   <---------YAB1  <--- ------>GT1   <---------MYB46(2)<---------AHL20(1)<------ZmHOX2a(2)     <---------ANAC55(2)  -------- --->AGL15    <---------MYB59  --------->YAB1   <---------CCA1(2)<----------DOF2 <---------TOE2(3)   gtaatgatttcgattaccaaacttgattttacattataattagaggtcttagatctaattaaagtcactttgttacttgaattgagattgtaatgacact  5923800                                                                       <---------ANAC46              <------MYB46(1)                                   --------->ANAC55(2)              <------MYB83                                      --------->ANAC58    <---------ANAC46                                            --------->ANAC58    <---------ANAC58                                       ----------->HVH21    <---------ANAC58                                     <---------ANAC58             <---------ARR11(3) ----->ZAT14 --------->MYB59             ----------->GT1 <---------ANAC58 --------->ZAT14  <---------TOE2(3) ------ZAT14 <---------AtMYB61   --------->YAB1          >>>>>>>>>>WRKY18<-----------RAV1(1) ->ZAT6 <---------TOE1(3)    --------->ZAT6        ----------------------->TaNAC69(2) --------->ARR11(3)   atagttgcttatggtttggtctagtttctgaacactaatagtttagtaaaacttgtttgacttgacaagtattctgtgttgtctaatagattttagatta  5923900  Previous    Next  AGI:  At4g09320.1    Description:  NDPK1 (nucleoside diphosphate kinase 1); ATP binding / nucleoside diphosphate kinase. Identical to Nucleoside diphosphate kinase 1 (NDPK1) [Arabidopsis Thaliana] (GB:P39207;GB:Q41989); similar to NDPK2 (NUCLEOSIDE DIPHOSPHATE KINASE 2), ATP binding / nucleoside diphosphate kinase [Arabidopsis thaliana] (TAIR:AT5G63310.1); similar to nucleoside diphosphate kinase 1 [Brassica rapa] (GB:BAB86292.1); contains InterPro domain Nucleoside diphosphate kinase, core; (InterPro:IPR001564) Range:  from: 5923397    to: 5924529    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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