Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                         --------->ANAC58                                                       --------->ANAC58                                                       --------->ANAC55(2)                                                       --------->ANAC46                                                       --------->ANAC55(1)                                     --------->ANAC46 --------------->AtSPL3                  <------                                <---------AHL20(2)  --------->ZAT14                          --------                               --------->AHL20(2)   <---------REM1(2)                        --------                          <---------ATHB12          <---------ZAT14                         <--------                  <---------------AtSPL8          --------->ANAC46                          <-------- <---------ZAT6   --------------->AtSPL8        --------->ZAT6                              --------- ->TEIL        --------->AHL20(2)    --------->ANAC55(2)     --------->ATHB12         <-----------GT1 >TOE1(1)      <---------AHL20(2)    <---------ANAC55(2)    --------->ICU4      ----------->GT1   ctagttttaaaacacatttaaatgtacaatcaattttatacgtgaattcaacactacacgtactaattggatactacaaatgtggtttaaacgagattcg  5854800                                  <---------WRKY12                               --------->ANAC58         ------->GAMYB                               --------->ANAC58        <---------MYB55(2)                            --------->STY1(2)          --------->MYB46(3)  --------->AHL20(2)       --------->ANAC58           -------->P -TEIL                     --------->ANAC58           ------>MYB46(1) ->CCA1(2)              <---------At4g35610 <---------AGP1 ->GLK1(2)              --------->At4g35610 --------->ARR11(3) -GLK1(2)               --------->ZAT2    ----------->ARR10  <---------YAB1 -ARR14(2)           <------ZmHOX2a(2)   <--------P   ------>MYB83                          --------- >ARR14(2)   <----------DOF2<---------STY1(2) ------>ZmHOX2a(2)            <---------At4g35610      -   aagataaattggagtctttttggatcagctagcaagtcaatgggttgatctggtccaaccacgatgaatgagttttcatctaatatagtcgaagctataa  5854900                 --------->ATHB12               <-------MYC2               <-------MYC3               ------->MYC2               <-------PIF5               ------->PIF5               ------->MYC3              <---------O2              --------->TGA1a              <---------TGA1a                              <---------AHL20(2)              --------->bZIP60(2)                         --------->AHL20(2)              --------->O2                                <---------AHL20(2)              --------->ANAC46                        <---------YAB1  <---------HSFB2a(2)                              <---------AHL20(2)                    <----------ID1  --------->HSFB2a(2)          <---------YAB1     <-----------TBP   ------------>CBF     ----------->GT1 >CCA1(2)     --------->ANAC55(2)         --------->ATHB12<---------AHL20(1)           ---------->DOF2 -------->At4g35610  <-----------GT1 <-----------GT1  <---------AHL20(2)    --------->ANAC46   gcttctgaaactatccacgtgattagccatcttatcatttaacatgtttggattttataattttttttatgtcaatacacgtagaaagaaaaagaaaaaa  5855000                    >>>>>>>>>>GT-3b                        <------ZmHOX2a(1)                 --------->ANAC58                        <---------TOE2(3)                 ----------->GT1           <---------------AGL15                                -----      <---------ARR11(3)                   --------------->AGL15                              <------      <---------AHL20(1)       <----------DOF2    ----------->GT1   ---------->DOF2     <---------MYB52(1) ------------>CBF--------->ANAC58         <-----------------AGL3----------->GT1    <---------ALFIN1   aaaaccaatatatgtaaacaagaaaaatataagcttttgaaaaaacaaaatatggaaataaggaaaatgtaaaagtatactttcaacaccgataagtgca  5855100                                   <---------ZAT6                                  <---------TOE1(3)                              --------->ZAT2                              --------->STY1(2)                              <---------STY1(2)    --------->DAG2           --------->ANAC46   ---------->DOF2           --------->ANAC58 -->TEIL         --------->MYB52(1)----------->GT1               ---------->DOF2  --------->LBD16 -TEIL  --------->MYB52(1)   --------->ANAC58       --------->TOE2(2)   ----------->GT1   tctaaaaaagtatcggagcaaactgaagaacaagctagggttataagaaataaacctatggagccatcaaagatgcgaaaaatccagagaataacacagt  5855200                                            ------>ZmHOX2a(2)                                           <------ZmHOX2a(2)                                          <---------AGP1                                          --------->ARR11(3)                  ==========================HOX2a_HOX2a                  ------>ZmHOX2a(2)       <---------ARR11(3)                 <------ZmHOX2a(2)        --------->AGP1                 ===========================HOX2a_HOX2a                <---------AGP1         <---------HSFB2a(2)                --------->ARR11(3)     --------->HSFB2a(2)                <---------ARR11(3)   ==============HOX2a_HOX2a            --------->At4g35610           --------->YAB1            ------>ZmHOX2a(1)                    <------NtERF2           -------->HAHB4       --------->KAN4(2)                        --------->ANAC58          <---------YAB1       <---------KAN4(1)                         ------>NtERF2        --------->YAB1         --------->KAN4(1)                         --------->ANAC58       <---------YAB1          <----------TaMYB80                       --------->ATERF1(2)     --------->YAB1           <---------KAN4(2)                         <---------ATERF1(2)        <-  <---------At4g35610         ---------->TaMYB80                 --------->ANAC58              ------  --------->At4g35610---------->DOF2 =============HOX2a_HOX2a    --------->ANAC58           ---------   tttcagatgataataatagatctcaaagagagcatattcctctagatctaatcgtggagatagtctcaagcctgccagcaaaatcgattgtgagatttag  5855300                                                                     <-----------HVH21                                --------->ANAC58      <---------ANAC58                                --------->ANAC58      <---------MYB46(3)         ------>ZmHOX2a(1)                                --------->ANAC46      <---------ANAC58      <---------ANAC58                              --------->AtMYB61--------->ZAT2      ------>ZmHOX2a(1)   <-----------ARR10          <---------ALFIN1 <---------ZAT2     <---------ANAC58  <---------MYB52(1)    --------->YAB1         --------->At4g35610<---------ANAC58        <---------At4g35610 ------TEIL             <---------ICU4    <-----------GT1    --------->ANAC58   <---------ANAC58 --->MYB59             <---------ATHB12<---------GLK1(1)     --------->ANAC58   <---------ANAC58    - >CCA1(2)            --------->WOX13(1)--------->GLK1(1)----------->HVH21   <---------ANAC58        <   gtccgtttctaagctctggtcttcaatcatcaccactccagatttcaccagctcggtcgtgacacggtccttgtcatcgcgtccttgtgttctgctaatc  5855400                                                                                             <-------                                                                                             <-------                                                                                             --------                                                                                            <--------                                                                                            <--------                                                                                            ---------                                                                         <-----------GT1 ------------                                                                --------->ALFIN1         <-----------                                                              <---------ANAC58          <------------                                        ----------->RAV1(1)   <---------ANAC58          -------------        --------->ANAC46              <---------ZAT18         <---------O2              -------------        <----------ID1                <---------ZAT14         <---------ANAC46          <------------        --------->ANAC58              --------->ZAT14         <---------bZIP60(2)       <------------        --------->ANAC58    <---------ANAC58                --------->MYB52(1)          --------->LBD16 -------->HSFB2a(2)         <---------ANAC58               ------>ZmHOX2a(1)    <-----------GT1 ----- ---------HSFB2a(2)       <-----------GT1               ---------->ID1<---------KAN4(2) -------------   ttccaaaaacacgacaagctgtttttttttgcttctccagtacaccagaagaagacttgtcctaacgtggagaattttcaatatacaatccccaataatg  5855500 <---------At4g35610 --------->At4g35610 -ATHB1 --ICU4 ->YAB1                              <---------ANAC46 -ATHB12                             <---------ANAC58                                           ----- -ATHB51                       --------->ATHB12                                                 ----- >ICU4 <---------TOE2(3)     <----------DOF2                                                    ----- --->AGL15               --------->ANAC46        <---------HSFB2a(2)                 --------->DAG2 ----AGL15              <---------LBD16          --------->HSFB2a(2)                ---------->DOF2 -----AG               <---------DOF5.7(2)  --------->HSFB2a(1)                  <---------ANAC55(2) ---->AGL1            <---------REM1(2)     <---------HSFB2a(1)                  --------->ANAC58 ---->AGL2           --------->DOF5.7(2)    <---------HSFC1(2)                   --------->ANAC58 -----AGL1           <-----------HVH21      --------->HSFC1(2)         --------->GLK1(1)        ----- -----AGL3      --------->ARR14(2)   <---------ANAC58              --------->YAB1--------->ANAC46 --- ---->YAB1      --------->GLK1(2)<---------WOX13(1)         <---------YAB1     --------->YAB1   ----- ---->AGL3      <---------ARR14(2) <---------AHL20(2)       --------->ICU4   <-----------HVH21  -----   gtaagcttcaacgttgtgaatccgttcacggcttgatttacttggaaacttctacaaatgtcatgtttatcagaaaccctatcacgaaaagcttcttcac  5855600                                                                ------->GAMYB                                                                ----------->GT1  <---------MYB59                                             <---------------------WRI1  --------->TOE2(3)                                          --------->MYB52(1)  --------->TOE1(3)                                         <---------WRKY38(1) ----------------->AG                                      <---------ATHB12 <---------ANAC55(2)                                       --------->MYB46(3) ---->ANAC55(2)                                           --------->ANAC46 ---->ANAC55(1)                                 <---------ARR14(2) ---->ANAC58                                    --------->ARR14(2)        <---------------AtSPL8 ---->O2                        ----------->HVH21        --------->WOX13(1)                      ---- ------>DOF5.7(2)              <---------MYB52(2)--------->CCA1(2)        --------->DAG2         ---- ---->ANAC46     --------->ANAC58       <----------DOF2------>ZmHOX2a(2) ---------->DOF2       ------ ---->ANAC58     --------->ANAC58--------->MYB52(1)<---------YAB1--------->At5g28300       ----------   gttacctaaacttgatagcaaggaaggcagaccactaacgggatttttgggatatgatccaatcaacggtaaatataaagtactatgcatacttaaagaa  5855700  Previous    Next  AGI:  At4g09190.1    Description:  F-box family protein. Identical to Putative F-box protein At4g09190 [Arabidopsis Thaliana] (GB:Q9M0Q9); similar to F-box family protein [Arabidopsis thaliana] (TAIR:AT5G18160.1); similar to hypothetical protein OsJ_028422 [Oryza sativa (japonica cultivar-group)] (GB:EAZ44939.1); contains InterPro domain F-box associated type 3 (InterPro:IPR013187); contains InterPro domain Cyclin-like F-box (InterPro:IPR001810); contains InterPro domain F-box associated type 1 (InterPro:IPR006527) Range:  from: 5855173    to: 5856324    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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