Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                <---------YAB1                                                             <---------AHL20(1)           <---------CCA1(1)                                 <---------AHL20(2)           <---------RVE1(1)                               <---------YAB1          <---------ARR11(3)                            --------->AHL20(2)          --------->ARR11(3)                      <---------CCA1(2)         <------ZmHOX2a(1)                      <---------ANAC58             --------->ICU4       <---------TOE2(3)               --------->TOE2(3)<---------AHL20(2) --------->YAB1      ------   <---------YAB1                 <---------At5g28300 <----------DOF2     <---------YAB1  --------->ZAT14 ------TOE2(3)<-----------GT1    <-----------GT1<---------ANAC58    <---------TOE2(3)     <---------ZAT14   atgttattttaggatatttctcttcaagtttctatttaccacctaaaaatgcgtctcttttattatttttgatgttgtcatagttatttcagaacagtcc  5834700                         <---------AHL20(2)                     --------->ATHB51                     <---------ICU4                     <---------AHL20(2)                                                            <-                     --------->AHL20(2)                                                    --------->ANAC58                    <---------YAB1                                                         --------->ANAC55(2)                    --------->ICU4           --------------->AGL15                         --------->ANAC58                  --------->YAB1             <---------------AGL15                       <-----------GT1                  <---------ICU4             <---------DAG2                  ----------->GT1      <--                 --------->ICU4              <----------DOF2               ----------->GT1 <---------ANAC55(2)                 <---------YAB1     --------->WRKY45             <<<<<<<<<<WRKY63   --------->ANAC55(2) --->ZAT14  --------->ANAC55(2)   <----------DOF2              ----------->GT1      <---------ANAC55(2)   agacttaaatgtttatgtgataattattttcttgaactttgactaaacttttttaagtatggaaatagtcaaatagatagagaaaaacgtattacgcatt  5834800                                                                  <-----------GT1                                   <---------ARR11(3)       --------->YAB1             --------->DAG2        --------->GLK1(2)       <---------YAB1            ---------->DOF2        --------->ARR11(3)<---------WOX13(1)          <------ZmHOX2a(1)       --------->RVE1(1) <------------CBF                            <----    --------->ZAT6         ----------->GT1        <---------AHL20(2)                    --------->YAB1 --------REM1(1)           --------->ANAC58    <---------TOE2(3)<---------AHL20(2)<-------TEIL  <---- -------TOE2(3)            --------->ANAC58    ----------->GT1 --------->YAB1 --------->DAG2    -----   aatgtagcactaggaaaaggaaaacaaacaagaaaaaaatctatgaattaagttaattgctataattttaacaaggtgagaaggtgcaaatcgtagtaat  5834900                                                                                           --------->ANAC58                                                                                   <---------AHL20(2)                                                                                 ----------->TBP                                                                               <---------AHL20(2)                                                                               --------->AHL20(2)                                                                               ----------->TBP                                                                             <---------AHL20(2)                                                <---------YAB1               --------->AHL20(2)                                   <----------DOF2                           ----------->TBP --------->ZAT14           <-------TEIL        <---------AHL20(2)          --------->AHL20(2)       - -----ATHB12          <-----------GT1        <---------YAB1                ----------->TBP --------->ANAC58 -----YAB1           <-----------GT1       <---------AHL20(2)              <---------AHL20(2)-------- ------->CBF        <---------AHL20(2) <----------DOF2                   ----------->TBP   --------->ANAC46   caatgtagtcaaacccaaaaattttaacattcattcactttctttttatttttatttcttcttagatgtatacctatatatatatataaacacacactac  5835000                                                                                                   --              --------->AHL20(2) --------->YAB1                     <-----------RAV1(1)           <--            ----------->GT1    <-----------GT1                   <----------DOF2       <---------ICU4      --------->DAG2  <----------DOF2                        <----------DOF2        --------->YAB1---     ---------->DOF2 <---------ANAC58                       <---------ANAC58     <------------CBF---- ----------->CBF     <---------ANAC58               --------->TOE2(3)           >>>>>>>>>EIN3    <--- ->ANAC46 ---------->DOF2     --------->YAB1<-----------GT1 <---------ANAC58   <-------TEIL    <-----   ataacaataaagcaaagaaaatagcttttcatttatcatctctaatttacaaaacattagtagctttcttttgttgtgatatacattgatcatggctaag  5835100                                       ----------->GT1                                       --------->ANAC55(2)                                       <---------ANAC55(2)                                      >>>>>>>GRF7                                      --------->MYB59                                     <-----------RAV1(2)                                   <-----------HVH21                                <----------DOF2        <---------YAB1          --------------->AGL15                                           <---- ------->ARR11(3)               <---------------AGL15                                         <------ -------GLK1(1)            <---------ANAC58                                          --------->ARR11(3) ------>GLK1(1)            <---------ANAC58                                          <---------AHL20(1) ----->ARR11(3)          <---------YAB1<---------At4g35610                           --------->AHL20(1) ------ARR11(3)  --------->YAB1<---------ANAC58                                     --------->AHL20(2) ----TOE2(3) <-----------GT1   <---------ANAC58            <----------DOF2 <---------------AtSPL8   atatcatgttcttatttactcatacttatgcttgctttgtcaggtaatttcatgttttccactttcaaacatctaagcatgtacaaatatatagtttcag  5835200                                                                                    <----------DOF2                                                                                   ------>ZmHOX2a(2)                                                                                 <---------ARR11(3)                                                                                 --------->ARR11(3)                                                                            -------->ATHB1                                                                            <---------ICU4                                                                            --------->ATHB12                                                                            --------->YAB1                                                                           <---------ATHB12                    <----------DOF2  <---------MYB46(3)                    --------->ICU4 -----At4g35610    <---------DAG2  <---------At4g35610    --------->CCA1(2)<---------YAB1 -----RAV1(2)   <-----------GT1    <-------GAMYB  --------->MYB52(1)     --------->YAB1        <-----   gtcataacatatgggattttaccttttcagttttttcagttgttgagaaggctaagggagataagcgttgtagtataatcattgatctttctccatgtta  5835300                                                                                                   <-                                                                                                  >>>                                                                                                  >>>                                                                                                 ----                                                                     <---------------AtSPL8  --------                                                                     --------------->AtSPL8------->TEIL                   --------->AtLEC2                                <------MYB46(1)       --------->ZAT14                 --------->YAB1                                    <------MYB83          --------->ZAT18                <---------ATHB12                                  --------->MYB111(1)    <---------ZAT14              --------->WOX13(1)                             ---------->DOF2        <---------ANAC58          <---------ANAC46      --------->ZAT18            ----------------->AGL1   <---------ANAC58          <---------ANAC58     --------->ANAC58         <---------CCA1(2)     ------>ZmHOX2a(1) <---- ------GT1<---------ANAC58     --------->ANAC58 --------->GLK1(2) --------->MYB111(2)    <---------ZAT18   ccctattgaatgtcgtctatcatgcattaccgagcgcaatggagatggagaatgtgttgtatccaaagttggtagtactcctaattgtttgtgtacttat  5835400                                                                                     --------->ARR11(3)                                            <---------AHL20(1)                       --------->ARR14(2)                                            --------->AHL20(2)                       <---------ARR11(3)                                     ----------->GT1                                 <---------ARR14(2)                              --------->AHL20(1)        ------>ZmHOX2a(1)      --------->HSFB2a(2)                              --------->ARR11(3)       --------->TOE1(3)       <---------HSFB2a(2)    <---------DOF5.7(2)       <---------AHL20(1)       --------->TOE2(3)   <---------AHL20(2)  --------->DOF5.7(2)         <---------ARR11(3) --------->AHL20(2)        --------->AHL20(1) --------WOX13(1)             --------->AHL20(2) <---------ICU4            --------->AHL20(2) >>>>>>ARR1                   <---------AHL20(2)--------->AHL20(2)     --------->AHL20(1) >>>>>>ARR2                <---------AHL20(2)   <---------AHL20(2)     <---------AHL20(2) ----->ATHB12              --------->AHL20(2)  <---------AHL20(1)      --------->AHL20(2)          -- ->ICU4 <----------ID1   <---------YAB1     <---------AHL20(2)         <---------AHL20(1)       ----- -----YAB1           --------->ANAC55(2)    --------->AHL20(1)        --------->AHL20(2)   <---------ALFIN1   gattgttaacgagacaaatttttaagtattaatatattctagttaataaaataatttccttaatctatatgaataaattttttggaagttcttccacctt  5835500                                                                                                  ---                                                                                              <------          --------->ATHB51                                                                   --------          --------->AHL20(2)                  <---------DAG2         <------ZmHOX2a(2)       <-------     --------->AHL20(2)                      --------->At4g35610    --------->ARR11(3)       <-------  --------->ATHB51             <---------At4g35610 <---------ZAT6   <---------ARR11(3)       -------- <---------YAB1              --------->YAB1  <---------At4g35610   --------->YAB1          --------->YAB1 --------->ICU4<---------AHL20(2)   <---------GLK1(1)           ---------->DOF2      <---------ZAT6 ------->YAB1 --------->AHL20(2)   --------->ARR11(3)     <---------AHL20(2)         ----------->GT1 ------>GT1   <---------AHL20(2)   <---------ARR11(3)<---------MYB52(1)            <---------ANAC46   gttataattgaataatttaaattgaaaacattcagaagatttcagtcaccttactgttatttaaaacaaagatcatggtctggtcgagtgtaaaaataat  5835600  Previous    Next  AGI:  At4g09153.1    Description:  LCR36 (Low-molecular-weight cysteine-rich 36). Identical to Putative low-molecular-weight cysteine-rich protein LCR36 precursor (LCR36) [Arabidopsis Thaliana] (GB:P82751); similar to LCR35 (Low-molecular-weight cysteine-rich 35) [Arabidopsis thaliana] (TAIR:AT2G22121.1); contains InterPro domain S locus-related glycoprotein 1 binding pollen coat (InterPro:IPR010851) Range:  from: 5835092    to: 5835409    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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