Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100            <----------DOF2                                                                           <        <---------YAB1                                    <------MYB46(1)                           <       <---------ARR11(3)                                 <------MYB83                              <  --------->AHL20(2)                                 <------ZmHOX2a(1)                              -  <---------AHL20(2)                <-------GAMYB  <---------TOE1(3)               --------->AHL20(2) --------->AHL20(2)                 --------->At4g35610   ----------->GT1 <-------GAMYB ---------->DOF2 <---------AHL20(2)   <----------DOF2              <---------TOE2(3)      <---------At4g35610       < --DOF2--------->ARR11(3)           <---------At4g35610  --------->MYB59  --------->At4g35610  <-----   gaataaaattatctttgttttaggctttcaacaatttcagttgtctaaaaattaaggattaggtcaaaacaatttcagttgtctaaaaaataaagtcttg  5813600             --------->AHL20(2)           ----------->GT1                <---------ARR14(2)      <---------WRKY38(1)                 --------->ARR14(2)            --------->YAB1 ---------ANAC46                          <---------GLK1(2)             -------->HAHB4 ---------ANAC55(2)                   <---------MYB52(1)               --------->ICU4 ---------ANAC58                     <-----------HVH21                 <---------ATHB12 -------->ANAC55(2)         --------->ATHB12                       --------->MYB46(3) ---------ANAC58          --------->TOE1(3)                      ----------->RAV1(1)             ---- ------RAV1(1)            --------->TOE2(3)     <----------DOF2 <----------ID1                -------   ttgcgtagtcaacaagttaatacacaaaccttattggtccgtcatattctctttgagagaacataaacaacaaatgatggtttttcaattgtctatacgt  5813700                                             --------->AHL20(2)                                           ----------->GT1                                    --------->ANAC58                                    --------->ANAC58                                 --------->ZAT18                                 <---------ZAT18                           <---------------AtSPL8                                <---------ANAC55(2)                        <---------------AtSPL3                                --------->ANAC55(2)                        --------------->AtSPL3                                <---------ANAC46                      <---------REM1(1)                                <---------ANAC58                 --------->ZAT14                               --------------->AtSPL3            <---------ZAT14    ----------->GT1            --------------->AtSPL8      <---------ARR14(2)          ---------->DOF2 ----->SPL7                <-----------RAV1(1)             --------->ARR14(2)    --------->ICU4   --- -->ANAC46        <---------YAB1<---------ANAC58          <---------GLK1(1)--------------->AtSPL8 ---   agggcgaggtcaaaactgttaacatagtcttgttgcgtactcaacaagttaatagatagggtatcggtgtagttgtagtagtacttattcaaagtcaaaa  5813800                                                                                          <------ZmHOX2a(2)                                                                                         <---------ARR14(2)                                                                                         <---------AGP1                                                                                         <-----------ARR10                                                                                         --------->AGP1                                                                                         --------->ARR14(3)                                                                                         --------->ARR14(2)                                                                                         <---------ARR14(3)                                                                                        <---------CCA1(2)                                                                                        <---------ARR14(1)                                                                             <---------ANAC46                                                                             --------->bZIP60(1)                                                                             <---------TGA1a                                                                             <---------O2<---------ARR11(3)                      <---------YAB1                                         --------->O2--------->ARR11(3)                      <---------ATHB12                                       <---------ANAC58              --------->AtMYB61                                              <---------ANAC58              <---------MYB59                                                --------->TGA1a<--------        ---------->DOF2--------->ATHB12                                   <-----------RAV1(1) <------      <------ZmHOX2a(1)<---------ICU4                                   <---------At5g28300------>ZmHOX2a(2)     <----------ID1   --------->ICU4                                   <-----------GT1 ----------->ARR10 ------>TOE2(3) ------>MYB83        ------------>CBF                <---------ICU4<---------ANAC46 ------>TOE1(3) ------>MYB46(1) ----------->GT1                ------------>CBF----------->HVH21    -   cgttaagaggaaaagaccaaactaatcattcggaccgaaacaattccaacttaacatagtagtaatacaatatttactgtcgtgacgagcagatcttatt  5813900                                                                                                 <---                                                                                                 <---                                                                                                 ----                                                                                                 <---                                                                                                 <---                                                                                                 ----                                                                                                 ----                                                                                   --------->DOF5.7(2)                                                                    --------->GLK1(2)          ------                                                                    <---------ARR11(3)      <--------            --------->GLK1(2)                                       <-----------ARR10 <---------TOE2(3)   --------->ANAC46      <-----------GT1                           <---------GLK1(2)  <---------YAB1 -YAB1  --------->YAB1----------->GT1                           --------->YAB1 <------ZmHOX2a(1)----- ------CBF <---------GLK1(2)              <----------DOF2 --------->YAB1 <------------CBF--------->ICU4 ----->ZmHOX2a(2) ---------->DOF2  <<<<<<<<<TBF1       --------->YAB1  <---------YAB1<---------DOF5.7(2)   gatctacgaatcagaatctctaaagtgtaacaacttcttcttctctttctctcgctataatcaaaatcagaatcttattgaggacgttaacattatgaat  5814000            <-----------GT1                                                       <-----------HVH21         --------->GLK1(1)                                                     --------->ANAC55(2)         <---------GLK1(1)                                                     <---------ANAC55(1)    --------->ANAC46                                                           <---------ANAC58 ------ARR11(3)                                                                <---------ANAC58 --------ARR10                                                            <---------ANAC58 ----->ARR14(2)                <-----------RAV1(2)                        --------->ANAC55(2) ------ARR14(2)         <-----------HVH21              <----------DOF2    <---------ANAC58     <----- ------ARR14(3)     ------>ZmHOX2a(1)                  <---------DAG2     --------->ANAC46     <----- ----->ARR11(3)     <---------LBD16              <----------DOF2          <---------ANAC55(2)  <----- ----->ARR14(3)  ------>MYB46(1)       <---------AHL20(2)              <---------SPL7         ------- ->TEIL <---------ARR11(3)<---------ANAC58     ------>NtERF2          <----------DOF2         ------- -YAB1  --------->ARR11(3)<---------ANAC58   <---------RAP2.6(2)<----------DOF2<---------ANAC55(2) ---->RVE1(1)    ------>MYB83<-----------HVH21 <---------At4g35610    <---------DAG2  --------->At4g35610   atcttcacgagatatcaccttcctcgggtcgtatcaggtgttatattgccgctcttccttttccatcttttgccttacgttacatgtcagcaagagtcgg  5814100                                           <--------ATHB1                                           --------->ATHB51                                           <---------ICU4     --------->MYB52(1)                    --------->YAB1    ------->GAMYB                          --------->ATHB12   <---------MYB52(2)                      -------->ATHB1   <---------MYB55(2)                     <---------ATHB51   <---------MYB111(2)            ----------->HVH21   --------->MYB46(3)           <---------ZAT2  ------>MYB46(1)               <---------At4g35610                   --------->AHL20(2)  ------>MYB83                  --------->At4g35610        <---------ANAC58                         < -MYB83                         ----------->RAV1(2)   <---------MYB52(1)                            - ----DEAR3(2)                   --------->ZAT2      --------->YAB1--------->ICU4                 <--- -MYB46(1)                    <-----------RAV1(2)  <---------ATHB12   <---------AHL20(2)         <--- -------->AtSPL8        ------>MYB83      --------->ICU4 <---------YAB1   <---------YAB1         <--- -------->AtSPL3        ------>MYB46(1)   <---------ATHB12 <---------ANAC58--------->ATHB12 <--------   taccaacaaacagcattagacaaaccaatctctcagctgactcaataattgcaatcgttgtgcttgcaatatttatatcattaggcatggtctcttgttg  5814200                                       --------->WRKY18(1)                                     <------MYB46(1)                                     --------->ANAC58                                     --------->ANAC58                                     <------MYB83                                     <---------At4g35610                                     --------->At4g35610                                   <-----------RAV1(2)                                  --------->ATERF1(1)                                  <------NtERF2                             <---------HSFB2a(2)                                 <---------RAP2.3(1)                    <---------PCF2                                 ------>NtERF2                         <---------DEAR3(2)         <---------ARR14(2)     --------->ATERF1(2)                   <---------DEAR3(1)         --------->KAN4(2)      <---------RAP2.6(2)                  --------->ALFIN1         --------->ARR14(2)     <---------RAP2.3(2)                  --------->ATERF1(1) ---------ZAT14                 <---------ATERF1(2)                  <------NtERF2 -------->ZAT18                 <---------DEAR3(1)                 --------->ALFIN1 ------ANAC58                  --------->ATERF1(1)                 <---------ANAC58 ------ANAC58                  <---------ABI4(1)                   <---------ANAC46 ------ANAC46                <---------RAP2.3(3)          ---------->DOF2   --------->HSFB2a(2) ---RAV1(1)                --------->ALFIN1 <---------ARR11(3)     <---------ANAC58             <----   cttgcactgcatattctatagggaagagattggggcggcaggtcaagatgtattacacagtagagcaaggcgtgggctcgagaaggaagtcatcgagtct  5814300                                                   --------->ZAT14                                                  --------->ALFIN1                                                  <---------ANAC46                            -------                                                  <---------REM1(1)                           -------                                                 <------NtERF2                                -------                                               <---------DEAR3(1)                          <---------ARR14(2)                                            --------->DAG2                                 --------->ARR14(2)          --------------->AGL15           ---------->DOF2                                --------->ANAC58          <---------------AGL15        --------->ANAC58                                  --------->ANAC58          <----------DOF2            --------->CCA1(2)                                <------ZmHOX2a(2)         --------->TOE2(3)          --------->ARR14(2)                               --------->ARR11(3)     <----------DOF2                <---------ARR14(2)                              <------ZmHOX2a(1) ------DOF2             ---------->DOF2--------->ANAC58                           <---------TOE2(3)   tttccaactttcctttattcagaagttaaagggctcaagataggcaaaggcggtgtagaatgtgcaatttgtctgagcgagtttgaggatcaagaaacgc  5814400                                                                                          <---------ARR14(2)                                                                                          <----------                                                                                          --------->GLK1(2)                                                                                          --------->ARR14(2)                                                                                         <---------CCA1(2)                                                                             <---------MYB52(1)                                                                          <---------LBD16<---------GLK1(1)   <---------MYB46(3)          --------->AtLEC2                       ------->MYC3   --------->AtLEC2 -->ANAC58            <---------ALFIN1                                <-------MYC3 <---------ANAC46 -->ANAC58     --------->REM1(2)  <---------YAB1--------->ALFIN1  <---------ZAT18  <---------ANAC58 -->ANAC46------>NtERF2  <----------DOF2        <-----------RAV1(1)<---------ALFIN1<---------ANAC58   tacgttggatgcctccttgtagccacactttccatgctaattgcatcgatgtgtggctctcttcttggtccacatgtccggtttgtcgtgcaaatctgtc  5814500  Previous    Next  AGI:  At4g09120.1    Description:  zinc finger (C3HC4-type RING finger) family protein. Identical to Putative RING-H2 finger protein ATL4C precursor (ATL4C) [Arabidopsis Thaliana] (GB:Q9M0R5); similar to zinc finger (C3HC4-type RING finger) family protein [Arabidopsis thaliana] (TAIR:AT4G09130.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO61662.1); contains InterPro domain Zinc finger, RING/FYVE/PHD-type (InterPro:IPR013083); contains InterPro domain Zinc finger, RING-type; (InterPro:IPR001841) Range:  from: 5813995    to: 5815032    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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