Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                 ----------->RAV1(1)   <----------DOF2             --------->LBD16    --------->GLK1(1)            --------->ANAC46    <---------GLK1(1)            --------->ANAC58    --------->CCA1(2)            --------->ANAC58   <---------ARR14(2)                                                 ---           <---------LBD16     --------->ARR14(2)                                             <------         --------->ANAC46 <-------GAMYB                                <---------ZAT2   --------->ARR11(3)       <---------ALFIN1  <---------MYB46(3)                            --------->ZAT2   <---------ARR11(3)      <---------ZAT14    <-----------RAV1(1)                  <---------At4g35610      --------->YAB1      --------->ZAT14  <---------At4g35610 <---------AtLEC2   <------NtERF2         ---------->DOF2   gagacaactacactccgcaacataccgctgttggatatgctttcttcatggctaatttgatggcagcaattcaagctgggagaggctaaagataatacaa  5803400                                                <------ZmHOX2a(1)                                  <---------HSFB2a(2)    <----------DOF2      --------->ATHB12     <---------TOE2(3)           ---------->DOF2 ------->DOF2           <---------YAB1        <---------TOE1(3)  <--------P--------->DAG2 ----ID1          <XXXXXXXXXXXXXXXXXXXXXMIR864-3P  ----------->GT1  <---------ZAT6   caaagacttttatgagtttttgtggtatcattgattttagaagtcattaaggattgaaaaacaaatggtagttttaaaaagttggaagaccaatttgtaa  5803500                                       <---------DAG2                                       <----------DOF2                              <---------ANAC58                ----------->GT1      ------>MYB46(1)                <---------DAG2              --------->ARR14(2)     ------>MYB83                   <----------DOF2              <---------GLK1(2)    <---------MYB59                  =================================              <---------ARR14(2)<-----------GT1            ----------->GT1 ------->TEIL          <---------At4g35610 <---------ANAC58         <---------YAB1   <---------YAB1   acttgagattggagcagattgtgaattcagtttcttaccaactttttggtttgttttatgactgtgaaaactttatgaatcttttgaccctaaactcaat  5803600                 --------->AHL20(2)          <---------ANAC46      --------->O2      <---------O2                                                                 --------->ATHB12      ===================================bZIP_DOF                                 <---------ATHB12      --------->TGA1a                                                           --------->WOX13(1)      <---------TGA1a          --------->DAG2      --------->ATHB12   <---------AHL20(2)  <-----------HVH21   <-------TEIL      <-----------RAV1(1)    <---------ZAT6<-----------HVH21 ===============bZIP_DOF      ---------->DOF2     <---------YAB1   --------->MYB52(2)   tactggtcacttgtgtctataaaatgcataaataaagcgaaaatgttggattacgattgggcttagtgttagttatttgggtcagtcattgagttgggct  5803700                                                                   <---------ANAC46                                                                   <---------AtLEC2                                                                   <---------ANAC58                                                                   <---------ANAC58                                                               <------------CBF                                                             <---------YAB1                                                             <---------ANAC58                                                             <---------ANAC58                                                         <-------GAMYB                                                        <---------MYB46(3)                                                        <---------DEAR3(2)                                                        --------->MYB55(2)                                          ---------->DOF2--------->ATERF1(1)                     ----                                       --------->ANAC58<---------ANAC46                        <-----                                  --------->YAB1       <---------RAP2.6(2)                 -------->P                        ---------->DOF2--------->ANAC46<---------DEAR3(1)                  --------->MYB52(1)                     ----------------->AGL2          ------------>AtMYB77              <---------At4g35610                  --------->GLK1(2)    --------->ANAC58<---------DREB2C(2)             --------->At4g35610   taaggcccataaatgagaagaatcccaaatgcagaatcaaaacgcaaagaagttttggcggttgcgattgcatgttttcttccaaacagagcttaccggt  5803800                                                                                 <<<<<<<<<TBF1                                                                            <---------GLK1(2)                                                                        ------>ZmHOX2a(2)                                                                       <------ZmHOX2a(2)        *TSS                                                          <---------ARR14(2)     ------------>CBF           <---------At4g35610                   <---------ARR11(3)  --------->MYB46(3)            --------->At4g35610                   --------->ARR14(2)     --------  <---------MYB52(2)      <-----------HVH21                           --------->ARR11(3) ------------ ------->GT1             --------->ALFIN1                             --------->AGP1   <<<<<<<<<TBF1 ----MYB52(1)     ---------->DOF2                                     <---------AGP1<<<<<<<<<TBF1   agtaacaaacaatatagagagaaagaagtgtgagagctacaagtttgaagaaatcgagtagagagagagacagatctagattcttcttcttcttcgtctt  5803900                         <------MYB83                         <------MYB46(1)                        <---------------AtSPL3                        --------->MYB59                        <---------------AtSPL8                       <--------P                                 ----------->GT1          <---------HSFC1(1)    ------->TEIL             --------->TOE2(3)          --------->HSFC1(1)<-------TEIL------->TEIL     --------->TOE1(3)          <---------HSFB2a(2)--------->ANAC55(2)        ----------->RAV1(2) -->ID1   --------->HSFB2a(2)<---------ANAC55(2)   --------->HSFB2a(2)      ========================= --------->WRI1    <---------ANAC46<----------DOF2 <---------HSFB2a(2)      ------>ZmHOX2a(1)   cttcgtcaacctctagaagactcgtgtaggtacgtagctttgaatctcttcttctgtaacctgaaattttgttaattcctcttgagagtgaagcattatc  5804000                <---------------AtSPL8                <---------------AtSPL3                --------------->AtSPL8          <---------HSFC1(1)                                                                      <--          --------->HSFB2a(2)                                                                    <---          <---------HSFB2a(2)                                                            <-----------          --------->HSFC1(1)   <---------TOE1(2)                                        --------->ANAC46      ------>ZmHOX2a(2)       <---------ANAC58                                          --------->ANAC58    <---------ARR11(3)        <---------ANAC58                --------->GLK1(1)         --------->ANAC58    --------->ARR11(3)        <---------ANAC46  <----------DOF2                        --------->TOE1(2) ============HOX2a_HOX2a---------->DOF2  <---------ANAC46  --------->ICU4       ---------->DOF2  ----   gagtttgatcttcgagaaattgtacataaatcgcttgtttctctcgtgttctttctttgtactgatttcaaaacttgaatcgcaaagaacaagcgataag  5804100          -------->P         ------->GAMYB        <---------MYB55(2)        --------->MYB46(3)        <---------MYB111(2)        <---------MYB52(2)        <---------MYB111(1)                                                                        <- ----ZmHOX2a(2)                                                                              ------->TEIL ------ARR11(3)       --------->ZAT14                                   <---------YAB1       -------- ----------WRI1       <---------ZAT14  <----------DOF2       ------->MYC3                    <------- ----->ARR11(3)   <---------ICU4   <<<<<<<<<<GT-3b           <-------MYC3                   <--------   atcaaaatcaactaccaaaatcactacagagagctatttttctttggattttggttttaaacatgtgtttgattacgattccagactgaaatttgtatct  5804200                                                                           <---------ANAC58                                                                           <---------ANAC46                                                                           <---------ANAC58                                                                        <---------MYB52(1)                                                                        ---------->ID1              <                                                                       <-------GAMYB               <-                                                                      <---------ANAC58             <-                                                                      --------->MYB52(2)          ---   <---------At4g35610                                             <----------DOF2           -------- ----------HVH21      <---------ANAC58                            <---------ANAC58           <------- ->ARR14(2)           <---------ANAC58                            <---------ANAC58        <---------TOE2(3) --ARR14(2)     <-----------RAV1(1) <---------DOF5.7(2)    <---------GLK1(2)<----------DOF2 <------ZmHOX2a(1) -CCA1(2)       <---------REM1(1) --------->DOF5.7(2)<---------GLK1(1)<---------ANAC58<---------At4g35610   gagtcagtggattttttggtgttgccttgttgattcgttcacgttgtagtagtagatttcagaattttgctttcgttgctttgagtttagcttaggattt  5804300  Previous    Next  AGI:  At4g09070.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT2G28230.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN67376.1); contains InterPro domain TATA-binding related factor (InterPro:IPR013921) Range:  from: 5802305    to: 5803389    Orientation: Forward Links:  TAIR  MIPS    AGI:  At4g09080.1    Description:  ATTOC75-IV/TOC75-IV (TRANSLOCON OUTER MEMBRANE COMPLEX 75-IV). Identical to Chloroplastic protein TOC75-4 (TOC75-4) [Arabidopsis Thaliana] (GB:Q5IZC8;GB:Q9M0R9); similar to TOC75-III (translocon outer membrane complex 75-III), P-P-bond-hydrolysis-driven protein transmembrane transporter [Arabidopsis thaliana] (TAIR:AT3G46740.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO21609.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN81047.1); contains InterPro domain Bacterial surface antigen (D15); (InterPro:IPR000184) Range:  from: 5803808    to: 5806352    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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