Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                  <------NtERF2                                                --------->At4g35610                                                <---------At4g35610                                               <---------DEAR3(2)                                               <---------RAP2.3(1)                                              <---------RAP2.3(2)          <---------ARR14(2)                                              <---------DEAR3(1)           --------->ARR14(2)                                              --------->ETT(1)          <---------ANAC58                                              <---------RAP2.6(2)       <---------ANAC46                                              <---------RAP2.3(3)       --------->ANAC55(2)                                              <---------DREB2C(2)       <---------ANAC58                        --------->AHL20(2)   --------->RAP2.6(3)       <---------TOE2(3)           <---------AHL20(2)               <-----------HVH21       <---------WOX13(1)          --------->AHL20(2)           <---------TOE2(3)          --------->ATHB12          <---------AHL20(2)  ----------->GT1--------->DDF1      --------->ICU4      --------->ICU4    --------->YAB1--------->MYB52(1)         <---------YAB1           <---------AHL20(2)   ----------->GT1   --------->YAB1   <---------DOF5.7(2)    <---------TOE2(3)    ----------->GT1  <- -------->DOF2      <---------YAB1    <-----------GT1     --------->CCA1(2)------->TEIL  --------->AHL20(2)   aaaaagagataattaaatgtttataataatatttgtaaattaacgatgtcggctcactagatttacgatgattgacgtatttgtttgtaaattttatgaa  5774800             --------->AHL20(2)             <---------AHL20(2)         --------->AHL20(2)         <---------AHL20(1)                        --------->YAB1         --------->AHL20(1)                        --------->TOE2(3)         <---------AHL20(2)    --------->ICU4    <---------ARR11(3)        --------->AHL20(2)   ---------->DOF2     --------->ARR11(3)    <-------TEIL     <---------AHL20(2)         <---------GLK1(1) <---------ANAC46    --------->AHL20(2)         --------->GLK1(1)      <----------DOF2 <---------ANAC58--------->AHL20(2)        ---------->DOF2        <-----------------AGL2        ----- <---------ANAC58<---------AHL20(2)     --------->At4g35610     <-----------GT1       <-----------GT1 ----------GT1<---------AHL20(2)    --------->MYB52(1)   --------->AHL20(2)      <---------AHL20(2)   attacgttcattaaattaaatatttaaatactaaagattaacagctaaagaaatcttaatgaaatattgccatctttgggttttaaattttctatttttc  5774900                                                                                          <--------HAHB4                                                                                          --------->YAB1                                                                                          <--------ATHB1                                                                                          --------->ATHB51                                                                                          <---------ICU4                    --------->AHL20(2)                                                   <---------ATHB51             <---------ARR14(2)                                                          --------->ICU4             --------->ARR14(2)                                           <---------ARR14(2)      <--            --------->GLK1(1)                                          <-----------------AGL1<-------            <---------GLK1(1)                                   --------->ATHB12         --------->AHL20(2)            <----------TaMYB80                                  <---------AHL20(2)       <---------ATHB12           <---------ARR14(2)                                  <---------YAB1        <---------ATHB12           ---------->TaMYB80                               <---------YAB1--------->ARR14(2) -------- ---->YAB1 --------->ARR14(2)                          ----------->GT1 ----------------->AGL1<-------   atatttcatatcggatatccgattaaaaatgaaatcagtaagtataccaaaatacaagcgttatatttattgggcctattcgggccattcaataattaat  5775000       --------->LBD16      --------->ANAC58      --------->ANAC58      --------->ANAC46     ------->MYC3     <-------PIF5     ------->PIF5     <-------MYC2     ------->MYC2                                                                              ------     <-------MYC3                                                --------->ANAC58             <------    --------->ANAC58                                             ----------->GT1              -------    --------->ANAC58                                             --------->ANAC58             <------  <---------ALFIN1                                              <---------TOE2(2)             ------- --------->MYB46(3)                                       <---------MYB52(1)           <---------AHL20(2) --------->DEAR3(1)    --------->LBD16                    --------->ARR14(2)    <---------AHL20(2) ---------GT1         --------->ANAC55(2)          ---------->DOF2             --------->AHL20(2) --AHL20(1)           ----------->GT1---------->DOF2<-----------GT1   ---------->DOF2<---------ANAC55(2) ->AHL20(2)           <---------ANAC55(2)     <---------ATHB12  <---------TOE1(2)    --------->ANAC55(2) --AHL20(2)   ----------->GT1     <----------DOF2 <---------ATHB12<------ZmHOX2a(1)  ----------->GT1<   tcacccacgcgcaaatgagttaatccgtaaaataggctttaaagcccattcaataaacccgtttcgcaggaaaaaagcccattaaataagtaatttccag  5775100              <---------ICU4              --------->ATHB51              --------->ATHB12                                                              ---------              --------->YAB1                                                    --------->LBD16              <------------ATHB5                           ------>NtERF2       <---------ANAC55(1)              <--------ATHB1                              --------->DEAR3(1)   <---------ANAC58           --------->WOX13(1)                            <---------At4g35610   <---------ANAC46          ------------>ATHB5                             --------->ATERF1(1)   <---------ANAC55(2)         ------------>CBF                           --------->ANAC58           <---------ANAC58     <---------DAG2                          --------->At4g35610            --------->ARR14(2)     <----------DOF2                        <---------ARR14(2)           --------->ANAC55(2)<--------    <---------DAG2--------->YAB1            --------->ARR14(2)<----------DOF2  --------->ANAC55(2)--- --->LBD16<---------------AGL15             --------->GLK1(2)<----------DOF2--------->GLK1(2)   ----- ---HSFC1(1)  -------->ATHB1               --------->RVE1(1) <---------DAG2 <---------ARR14(2)<------ -->HSFC1(1) <---------ATHB12           --------->DAG2   <------NtERF2   <---------ANAC55(2)--------- ---HSFB2a(2)<---------YAB1            ---------->DOF2  <---------ATERF1(1) ------->TEIL    <-------- -->HSFB2a(2)--------->ICU4        <---------MYB59---------->DOF2 <-----------GT1      <-----------GT1 -----------GT1<------------CBF <---------WRKY18(1) --------->ANAC58  <---------MYB52(1)   ------>NtERF2   aaatacccttttccaatcattgaaaattcaaacttgacctaaaaagtatctgaaaagccagcgccttttttcgttacgaatccgtgtttttgccagcttt  5775200                                   --------->YAB1                                   <---------ICU4                                  <---------YAB1     --------->MYB46(3)           --------->ICU4                                     ----------->GT1   --------->MYB52(1)             <---------ATHB12                                  ----------->GT1 >ZAT2                        --------->LBD16                                      <------NtERF2 -ZAT2 *TSS                  <---------ANAC55(2)                                  ------>NtERF2 ------>WOX13(1)             --------->ANAC55(2)        --------->YAB1            <---------At4g35610 ------->CBF                 --------->ANAC46          <---------YAB1            <---------ARR14(2) ----DOF2--------->GLK1(1)--------->ARR14(2)         --------->YAB1              --------->ARR14(2) >At4g35610               --------->GLK1(2)  <---------ALFIN1                 --------->ANAC46 -At4g35610   <----------DOF2--------->TOE2(3)  <---------ATHB12             <---------LBD16   caatccaacggctctcctttcttctcacaatccgtaatcatcgctccccactcattcattataaacaaaaacaaaaatccacggagccgataaaaaaaaa  5775300                                                                                               <-----                                                                                               ------                                                                                               ------                                                                                               ------                      --------->YAB1                                                           <-----                      <---------ICU4                                                           ------                      <--------HAHB4                                                           <-----                      --------->ATHB12                                                       <------ZmHOX2a(1)                    --------->GLK1(2)                                                      xxxxxxxxxx              ==================================HOX2a_HOX2a                               <----------              ------>ZmHOX2a(2)                                                         ------>NtERF2             <------ZmHOX2a(2)                                                       ------>NtERF2             --------->CCA1(2)                                                       <---------ATERF1(1)             ===================================HOX2a_HOX2a                         <---------bZIP60(1)            <---------ARR11(3)                                                      --------->bZIP60(1)            --------->ARR11(3)                                                      <---------ETT(2)            --------->ARR14(2)           ------>ZmHOX2a(1)                          --------->ETT(2)            <---------AGP1               ===================================HOX2a_HOX2a--------->REM1(1)            --------->AGP1         <<<<<<<<<TBF1                            <<<<<<<<<<<<<<<<<LFY            <---------ARR14(2)  <<<<<<<<<TBF1                        ===============================HOX2a_HOX2a           <---------CCA1(2) <<<<<<<<<TBF1   <----------DOF2         <------ZmHOX2a(2)<------NtERF2 -   aaaaaactctctcagatctgagaatcatttcttcttcttcttcctcactttgttcatcatcttcttctccgatctaaacaacaatggcgacaccaggagc  5775400 ------>ZmHOX2a(1) ----HSFB2a(1) --->At4g35610 --->HSFB2a(1) --->HSFC1(2) ----At4g35610 --->ZAT2                                            <-------GAMYB ----HSFC1(2)                                --------->ANAC58                                      <- xxxxxxxxxxx>smallRNA(si3)                   --------->ANAC58                                 <------ -RAV1(2) --------->CCA1(2)                ---------->DOF2        --------->ATHB12         ---------- -------->TOE2(3)                      --------->DEAR3(1)         ----------->GT1 ---------->DOF2----   ttcctcagcaagagatgaattcgtatacatggcgaaactcgccgaacaagcagagcgttacgaagaaatggttgaattcatggagaaagtcgcgaaagct  5775500                                                                  <---------At4g35610                                                                  <---------ZAT2                                                                  --------->GLK1(1)                                                                  --------->ZAT2                                                          --------->TGA2(2)                                                         <-----------HVH21                           --------->ANAC58             --------->ANAC58                 --------->ATHB12                           <---------ANAC55(2)          --------->ANAC46                 <---------ICU4   ---------->DOF2         --------->ANAC58<---------MYB52(1)<---------At4g35610         --------->YAB1 --------ETT(2)            --------->ANAC55(2)          --------->ANAC58                 <--------HAHB4 ---At4g35610     <-----------HVH21       <-----------HVH21  --------->At4g35610       --------->GLK1(2) >DOF2         <---------At5g28300       --------->ANAC46<-----------TGA1      <---------ANAC46 ----->At4g35610 --------->DEAR3(1)  ------>ZmHOX2a(1) <-----------STF1      <----------DOF2   gttgacaaagacgaactcaccgtcgaagaacgtaatctcctctccgtcgcttacaaaaacgtcatcggagctcgtcgtgcttcgtggagaatcatttcat  5775600                                                                                                 ----                                                                                                 <---                                                                                                 <---                                                                                                 ----                                                                                         --------->ARR11(3)                                                                                         <---------ARR11(3)                                          <---------ANAC58                              <---------GLK1(1)                                          <---------ANAC58                              <---------CCA1(2)                                      <-------MYC3<---------ANAC58                      --------->GLK1(1)                                      ------->MYC3<---------ANAC55(2)            <----------DOF2 ----                                   <---------ALFIN1--------->LBD16              --------->HSFC1(2)                               --------->WRKY38(1)<---------ANAC55(1)           --------->HSFB2a(1)                            --------->ICU4<---------ANAC46    --------->ANAC58  <---------HSFC1(2)                          <---------DOF5.7(2)     <---------ANAC58         --------->ANAC58     <----                        --------->At5g28300  --------->WRKY12 --------->ANAC58  <---------HSFB2a(1)                     <---------LBD16 --------->O2 --------->ANAC55(2)      --------->ANAC46   -------              <------ZmHOX2a(1)--------->WRKY12  ------>ZmHOX2a(2)         --------->ANAC58   -------       ---------->DOF2  --------->DOF5.7(2)<-------GAMYB <---------ZAT14 --------->MYB52(1)  <-------   cgatcgaacaaaaggaggagtctcgcggtaacgatgaccacgtttcgttgatccgtgactacagaagcaaaatcgaaacggaactttctgatatctgtga  5775700  Previous    Next  AGI:  At4g09000.1    Description:  GRF1 (GENERAL REGULATORY FACTOR 1); protein phosphorylated amino acid binding. Identical to 14-3-3-like protein GF14 chi (GRF1) [Arabidopsis Thaliana] (GB:P42643;GB:Q945M2;GB:Q9M0S7); similar to GRF4 (GENERAL REGULATORY FACTOR 4), protein phosphorylated amino acid binding [Arabidopsis thaliana] (TAIR:AT1G35160.1); similar to 14-3-3-like protein [Thellungiella halophila] (GB:AAM19701.1); contains InterPro domain 14-3-3 protein; (InterPro:IPR000308) Range:  from: 5775207    to: 5777478    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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