Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                <---------MYB46(3)                                             <---------DEAR3(1)                                             <---------At1g77200                                             <---------DREB2C(2)                                             --------->ETT(1)                                           <-----------HVH21                                          --------->ALFIN1                                         <-------MYC2                                         ------->MYC2                                         ------->MYC4                                         <-------MYC4                                         ------->MYC3                                         -------->ABF1                                        ======================bZIP_DOF                                        --------->TGA1a              --------->ZAT6            <---------TGA1a             <---------ZAT14            <---------O2             <---------ZAT18            <---------ANAC55(2)             --------->ZAT18            --------->ANAC55(2)           --------->REM1(2)            ============================MYC_MYB         ------->MYC4                   --------->O2         ------->MYC3                   <--------ABF1         <-------MYC4                 <---------ALFIN1         <-------MYC3               <-----------HVH21         <-------MYC2              ----------->HVH21         ------->MYC2              --------->DEAR3(1)        --------->ANAC55(2)        --------->DREB2C(2)        <---------ANAC55(2)        <---------ETT(1)        --------->TGA1a            --------->At1g77200        --------->ANAC58        <---------ANAC46           --------->ANAC46           --------->ANAC58             ----------        ==============================bZIP_DOF<---------DEAR3(2)                         <---------ICU4        <---------O2               --------->DEAR4(1)         ----------->GT1            --------->YAB1        --------->O2              --------->DEAR3(2)          --------->ANAC46          <---------ATHB51        <--------ABF1      <----------DOF2----------->HVH21------>MYB46(1)              <---------ATHB12        <---------TGA1a    <---------DAG2<-------MYC3      ------>MYB83         --------->ARR11(3) --------REM1(2)           =======================bZIP_DOF -------->P           <---------ARR11(3) ----ARR11(3)--------->ZAT14    <-----------GT1    <----------DOF2            <---------MYB52(1)   ctacacagacacgtgtacactatctctcactttttcaccgacacgtgtcggttctttcacctacaagtaaaactctctccattatcttcaataatgtcaa  5758000                                            ------>NtERF2                                        --------->ANAC58                                        --------->O2                                        --------->bZIP60(2)                                        --------->ANAC46                                        --------->ANAC58                              <---------MYB59                                                       <         <---------ALFIN1    --------->ANAC58                               <----------DOF2   <------         --------->ANAC58    --------->ANAC58                        --------->YAB1           ------- <-----------HVH21 --------->YAB1      <---------LBD16               --------->AHL20(2)       <------ ->GT1   --------->ANAC58    --------->ANAC46                --------->MYB46(3)         <-----------GT1   aaatgtcacacacacacttagtcatagtaatacccaatttccacggcacctatttgccatcgaacaaacaataaaaaactttattagttttcacaattaa  5758100              --------->LBD16                            <-------GAMYB                   --------->GLK1(2)    <-----------GT1  ----------->GT1               <----------DOF2                      <---------GLK1(2) ----------DOF2--------->LBD16                   ---------->ID1                         --------->ARR14(2) ---ICU4 <----------DOF2      ----------->GT1   <-----------GT1             ---------->DOF2       --- -->AHL20(2) --------->HSFB2a(2)            <----------DOF2           <-----------GT1   <---------ARR14(2) ---AHL20(2) <---------HSFB2a(2)            <---------DAG2         <---------ICU4  <---------ANAC46   tacttttaactctttcccgagagtcgtaagaagagaaaaaacaaaacttttttctttttcgttgaagaatttttacataaaagttttgtagattctctga  5758200                                                               --------->ATHB12                                                            <------------CBF                                                           -------->HAHB4                                                           --------->ATHB51                                                           <---------ICU4                                                           --------->ATHB12                                                           <--------ATHB1                                                          <---------AHL20(2)                                 --------------->AGL15    --------->AHL20(2)                <--------              --------->ARR11(3) <---------------AGL15    <---------ATHB51               ---------->ID1          ---------->DOF2       <---------ANAC58      --------->AHL20(2)            <----------DOF2      <---------ANAC46        <-----------GT1  <---------TOE2(3)       <------------CBF<-----------RAV1(1)    ----------->GT1   <----------DOF2         ---------->DOF2<---------WOX13(1)<---------PCF2 ------>YAB1  <---------ARR11(3)<---------ANAC58    ----------->GT1  <---------YAB1<---------DAG2   tcagaattgtgtaaaaggtattctctttttttttacttgttgaagaattaaagtaagtaaataattgatttcttattggagggacccttttgttgtcata  5758300                                                                                                 ====                                                                                                =====                                                                                                <----                                                                                                <<<<<                                                                                                <<<<<                                                                                                <<<<<                                                                                                <----                                                                                                <<<<<                                                                                               <-----                                                                                               <-----                                                                                               ------                                                                                               <-----                                                                                               ------                                                                                              <------                                                                                          <---------ANAC46                                                                                     <---------ANAC55(2)                                                                                     <------MYB46(1)                                                                                     --------->At4g35610                                                                                     <------MYB83----                         <-----------RAV1(1)                                         <---------ANAC46            <---------ANAC58                                                        --------->MYB111(1)            <---------ANAC58      <----------DOF2           *TSS                    --------->MYB111(2)            <---------ANAC46     <---------ANAC58         <------------CBF          --------->MYB46(2)        <---------At4g35610      <---------ANAC58  <-------GAMYB                    <---------MYB46(3)        --------->At4g35610 <-----------RAV1(1)   <------MYB46(1)                   --------->MYB59        <---------ZAT2 <---------At5g28300        <------MYB83                      --------->MYB52(2)        --------->ZAT2<-----------GT1             <---------MYB46(3)                --------->MYB55(2)  <-----------GT1 <------------------------ANAC81--------->MYB59                   <---------MYB55(1) -YAB1 <-----------RAV1(1)  <---------MYB46(3)   <---------AtMYB61                <---------MYB52(1)   gaatttactctgctgcgtttttttttactgttgttgctttgttcttgttgtttggttgtatattgttgatgctctctctctctcgttaggtgaagtagat  5758400      <------------------------ANAC81  <----------DOF2 ============================HOX2a_HOX2a ============================HOX2a_HOX2a --ZmHOX2a(2) <<<<GATA-1 <<<<GATA-4 <<<<GATA-2 -----GLK1(1) <<<<GATA-3 ----ARR11(3) ----AGP1<----------DOF2 --->ARR14(2)                                 <----------DOF2 ----ARR14(2)                        ------>ZmHOX2a(1) --->ARR11(3)                       --------->TOE2(3)    <---------YAB1                            <- ---CCA1(2)           ------>ZmHOX2a(1)     <---------At4g35610                                 <---- -->ZmHOX2a(2) <----------DOF2  <----------DOF2     ----------->GT1          ----------->GT1 --------   ctctcttttctctttctctttctcctctctctctctttccttactcagcttttgtggtgaatattgaagaaagtttctctggtgaataagagtttgttct  5758500                                                                                                 <---                                                                                             <-------                                                                                      ---------------                                                                                      ---------------                                                                     <----------DOF2  <--------------                                                                  <---------------AGL15--------------                                                                  --------------->AGL15<-------------     <---------YAB1                                               =================================== <---------AHL20(2)                                        <----------DOF2            --------------- --------YAB1                                          <-----------GT1                <-------------- -----YAB1            <---------ANAC58          --------->DAG2    =================================== -->ID1 ------->TEIL  <---------ANAC58         ---------->DOF2 <-----------GT1        ---------------   tatttttatgaatttgttctgttttcttgttgatagtttttgggtttgataaagttgtttcctttttacttcttttagtatctatctttccaattctagt  5758600 --------->ZAT14 <---------ZAT14                       <---------GLK1(1) --------GT1                           <------ZmHOX2a(2) --HSFB2a(2)                           --------->GLK1(1)                    <---------HSFC1(2) -->AGL2                              <---------ARR11(3)                    --------->HSFC1(2) -->AGL3                              --------->ARR11(3)                    <---------At4g35610 ---AGL2                              --------->AGP1                      <--------P ->AGL15                              <---------AGP1                    <---------MYB46(3)  --------- --AGL15                              <---------ARR14(2)          >>>>>>>>>>>>>>>>>LFY      <-------- ===MADS_MADS                         --------->ARR14(2)      <----------DOF2               <-------- -->AG                    <---------DAG2------>ZmHOX2a(2)    ------>ZmHOX2a(2) --------->At4g35610<-- ---AGL3                  <----------DOF2                  --------->ARR11(3)<---------ANAC58     <-- ==MADS_MADS       <----------DOF2   <---------At4g35610   <---------ARR11(3)<---------ANAC58  <----- -->AGL1       <---------At4g35610   <---------CCA1(2)<-----------GT1  <---------ZAT6     --------->ATHB12   aacttcactggttcttgagctctttcaactttttgtttcagatctctctgtgtttttttctgatctttctccagtggtagcttctgagttagtgattgta  5758700 ------>AtSPL8                                <---------ANAC46 -------AtSPL8                          <---------AtMYB61            <---------WOX13(1) -------AtSPL3                      --------->At4g35610            --------->ATHB12 --------DOF2                       <---------At4g35610   --------->At4g35610           ------>ZmHOX2a(1) -------DAG2                  --------->ARR11(3)          <---------At4g35610          --------->TOE1(3) ------GT1                    <---------ARR11(3)        <-----------GT1                --------->TOE2(3)   ctttacttccatacttcttgttcttgctcatagattttagctgtggttttgtggagttttagctctcagtgattgttttagttttagttccttaaacatg  5758800                       <----------DOF2                      ------>ZmHOX2a(2)                     <------ZmHOX2a(2)                       ------>ZmHOX2a(2)                    <---------AGP1                         --------->ARR11(3)                    <---------ARR11(3)                     <---------ARR14(2)                    --------->AGP1                         --------->ARR14(2)           <---------WOX13(1)                    --------->ARR11(3)                     <---------AGP1         <----------DOF2                   <---------CCA1(2)                       <---------ARR11(3)  ------->TEIL<---------ANAC58              --------->MYB52(2)                <-----------GT1       ---------->DOF2 <<<<<<<<<RAP2.2              <---------MYB46(3)          <----------DOF2 <---------CCA1(2) <---------YAB1 <---------ANAC58   ttttgttcatatgggtttgttagatctttgagttttcttcatttctttattatctctcttggatcttgatacaaaagtatgaatctttagattgcttcaa  5758900  Previous    Next  AGI:  At4g08980.1    Description:  F-box family protein (FBW2). Identical to F-box protein FBW2 (FBW2) [Arabidopsis Thaliana] (GB:Q9ZPE4); similar to F-box family protein (FBL20) [Arabidopsis thaliana] (TAIR:AT4G05460.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO67853.1); contains InterPro domain Cyclin-like F-box (InterPro:IPR001810) Range:  from: 5758360    to: 5760555    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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