Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                           --------->YAB1<-------PIF5                        <---------ATHB12<---------AtMYB61                      --------->WOX13(1)--------->ALFIN1                    --------->At4g35610------->PIF5                 <---------ZAT2   --------->ANAC46                               <---------ICU4------                 --------->ZAT2--------->WRKY12                                 <---------MYB52(1)          <---------MYB46(3)   ----------->HVH21                          --------->At4g35610  ------          <-----------RAV1(1)<---------At4g35610                          <---------ZAT2       <-----        <---------At4g35610  --------->At4g35610                   <---------ATHB12 <-----------GT1       ------->TEIL--------->RAP2.6(2)<---------ZAT2            <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2) ------TEIL      <---------At4g35610  --------->ZAT2      --------->YAB1  <---------At4g35610 <------ -->RAV1(1)      --------->At4g35610<-----------RAV1(2)--------->YAB1     --------->ZAT2   --------->YAB1   tttcatttgcatctgttgcagcagcaatcacagttgacgcaggtggtctgaaactactcatcatattcaaacattcagctccattagtaccattcagaat  5755000         <---------WOX13(1)       --------->ATHB12                                                                <---------MYB52(1)      <---------YAB1                                --------->At4g35610    <----------DOF2 --->GLK1(2)                            <---------ZAT18                    <---------DAG2          -- --->ARR14(2)               ------>ZmHOX2a(1)       <---------At4g35610   <---------ANAC58    <------ ----ARR14(2)    --------->AHL20(1)    ---------->ID1                     <---------ANAC58    <------ ---GLK1(2)----------->GT1 --------->TOE2(3)<----------DOF2   <-----------GT1    <----------DOF2 <---   ccccaatgctgattggaaatatgttatctccttagaacattgtcccctttcttcatcagccttctcaccatctatagcttttcctttcccttagcacttt  5755100                                                                                                 ----                                                                                             <-------                                                                                             --------                                         <---------HSFB2a(2)                                <--------                                         --------->HSFB2a(2) <---------ZAT2                 ---------                                      --------->GLK1(2)      --------->At4g35610            <--------             --------->ANAC46        <---------GLK1(2)       ----------->RAV1(2)            ---------     <---------ALFIN1  <---------------AGL15                 --------->ZAT2                ---------- ------->MYB46(3)      --------------->AGL15        ---------->DOF2                        <---------HSFB2a(1) ----DOF2    --------->ANAC58<---------TOE2(3)  --------->ANAC58                         <------ZmHOX2a(1) ---DAG2   <---------ALFIN1  --------->DAG2     --------->ANAC58                       <---------TOE2(3) --------GT1 --------->ANAC58<---------TOE1(3)---------->DOF2<---------At4g35610 -------->P--------->HSFB2a(1)   aacaactccaccctcacaccatcaactagataaggtagagattctagagaaagcaaaagattaagctgaggctcactctcccttaccctaaggaagttcc  5755200                                                                                       <---------At4g35610                                                                     --------->ANAC58 <---------RAP2.3(1)                                                                     --------->ANAC58 ------>NtERF2      --------->O2                                                 --------->MYB46(3)<---------RAP2.6(2)      <---------O2      <-----------RAV1(2)                     --------->ANAC58    <---------LBD16      --------->bZIP60(2)  <------ZmHOX2a(1)                    <---------ETT(1)   <-----------RAV1(1) -->ZmHOX2a(1)          <xxxxxxxxxxxxxxxxsmallRNA(i)      <---------MYB52(1)       ------->GAMYB --ARR14(2)            --------->MYB52(1)                --------->At4g35610     <---------ZAT2 ->ARR14(2)       --------->MYB46(3)                     <-------GAMYB           --------->At4g35610 -HSFC1(2)       ------>MYB46(1)    <---------ANAC46     <---------At4g35610     <---------At4g35610 >HSFC1(2)       ------>MYB83     <xxxxxxxxxxxxxxxxsmallRNA(i)  ----------->HVH21--------->ZAT2 -HSFB2a(1)     --------->ANAC46<---------ANAC58         >>>>>>>>>TAC1--------->MYB46(3) >HSFB2a(1)    <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)  ------------>AtMYB77 <---------ATHB12 ->ARR10      --------->MYB46(3)<---------ANAC58<---------ZAT14 --------->ANAC58 ----------->RAV1(2)   tcacagccatgtcgctaccaacaactacaggaggccttgtgtttacagagaacacagacagttggcccgacaaccaataactcaactgcggcttccagtt  5755300                                                                                                   --                                                                                                  ---                                                                                                  ---                                                                                         <xxxxxxxxxxx                                                                         <---------SPL7--------->GLK1(2)                                                               <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                                                               --------->YAB1       ------------>CBF                                                         ----------->RAV1(1)    <xxxxxxxxxxxxxxxxsmallRNA(i)                               <---------YAB1            *TSS <-------TEIL      ----------->GT1 -----                         <-------TEIL             <---------YAB1         <-----------HVH21<----------DOF2                   ------>ZmHOX2a(1)             <-----------HVH21   xxxxxxxxxxxxxxxxxxxx>smallRNA(le3)   ttctgcatcaagttcaaactcctcacatacattgttattcagcgtttgaaatgtcattgccacattcatacatacggtccgagcgtaacaatctttagca  5755400                                     --------->AtMYB61                                     ------->GAMYB                                    --------->MYB46(3)                                    <---------MYB55(2)           <---------ALFIN1        ------>MYB46(1)                    ----------->RAV1(2)      <-----------GT1              -------->P                <---------ANAC55(2) --------->RAV1(1)                 ------>MYB83              --------->ANAC55(2) ------>MYB46(3)                  <---------ALFIN1           --------->REM1(1)                  ----- ------>REM1(1)         --------->ZAT14                      --------->O2                    -------- xxxxxxxxxxxxsmallRNA(le3)--------->ZAT14                    <---------O2                   --------- ------>RAV1(1)         <---------ZAT14                   <---------MYB52(1)         <-----------GT1   acaacaaatttccacactcccttctctgaacagtcccaacctccagctataacacagaccgctacgtctcccccctgttcaattgtttcacaaactgtaa  5755500                                                                          --------->ANAC58                                                                          --------->ANAC46    ------>MYB46(1)                                                                        <---------ANAC58      ------>MYB83                                                                        <---------ANAC58     --------                                                        <---------HSFB2a(2)                  --------                                                        --------->HSFB2a(2)  ----------->RAV1(1)-----   <------ZmHOX2a(2)                        --------->RAP2.6(2)       <-----------GT1        -------- <---------At4g35610                        ----------->RAV1(1)    ------>MYB46(1)   <---------ZAT14 --------->At4g35610  --------->ANAC58   --------->ANAC58       --------->ANAC58     --------->ZAT14 ---->WOX13(1)        --------->ANAC58   --------->ANAC46       --------->ANAC58 --------->ANAC46 ->At5g28300          --------->ANAC46   --------->ANAC58 ---------->DOF2 --------->ANAC58  --------- -->GT1       ---------->DOF2    --------->ZAT14    --------->ZAT14------>MYB83<---------ALFIN1 -----   atcagatcacttgtaccaaagtacaagtcacaaactatactacaagccacaaactatactagaagcaccaaattacatgccacacactatactaccagcc  5755600                          --------->ANAC46                                                   <-------                          --------->ANAC58                                                  ---------    --------->ZAT14       --------->ANAC58                                                <---------ANAC55(2) ->ANAC46             <-----------GT1                      <---------------AtSPL8   --------->AHL20(2) ->ANAC58   --------->ANAC58                              ---------->DOF2     --------->ANAC46 ------>RAV1(1)--------->RAP2.6(2)           --------->ANAC58           --------->YAB1    --------->ANAC55(2) ->ANAC58   --------->ANAC58                 --------->ANAC58          <---------YAB1   <-----------GT1 >MYB46(3)  --------->ANAC46                ---------->DOF2--------->ANAC46   --------->ANAC58     -- ---->RAP2.6(2)----------->RAV1(1)       xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)--------->ANAC58   <---   acaaactatactacaagccacaaattacaagtcacaaactagtcagtaaggcacaaactataaggcacaaactataatagaagccataaattacatgtca  5755700                                                                   <---------DEAR3(1)                                                                   <---------MYB46(3)                                                                <------MYB83                                                                <------MYB46(1)                                                               --------->MYB55(2)                                                               --------->MYB59                                                       --------->ZAT2    <---------GLK1(2)                                                       --------->At4g35610   <----------DOF2                                             <---------PCF2    <---------MYB46(3)                                           <---------RAP2.3(3) <---------AtMYB61   <---------ZAT14                         --------->ZAT18    <---------MYB55(1) <---------YAB1   --------->ZAT14   <---------YAB1        <---------ZAT18   <---------MYB52(1)<-----------GT1   xxxx ----HVH21        <---------ARR14(2)      --------->ALFIN1 <---------ANAC46 <---------ICU4       xxxx >ANAC46          --------->GLK1(2)      <-------MYC3  <---------At4g35610--------->GLK1(2)   ------- ------->ANAC46   --------->ARR14(2)     ------->MYC3  <---------ZAT2<------NtERF2            <------ ------ALFIN1--------->YAB1     --------->AHL20(2)<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3) ---------->ID1   cacactatactacaatgacaaatctgattccaaattacttacatgtgggctcatagcagcagcgtttggtcgtcggaatctttactattcgtcgtctact  5755800                           <---------ETT(2)                           --------->DEAR3(1)                                         --------->TOE1(3)                           <---------DEAR3(1)                                      -------->P                          <------NtERF2                                           ------->GAMYB                          --------->ATERF1(1)                                    <---------MYB55(2)                         <-----------HVH21                                  --------->ANAC46                        <---------ATERF1(2)                                 --------->ANAC58                        --------->DEAR3(1)                                  --------->ANAC58                 <---------DAG2                                         --------->ANAC46           --           --------->WOX13(1)                                    <---------------AtSPL8      --------         --------->ZAT14--------->ATERF1(2)                      --------------->AtSPL8      --------         <---------ZAT18<---------ANAC46                        --------->YAB1   --------->MYB46(3)-- xxxxxxxxxxxxxxxxxxx>smallRNA(se3)                        --------->YAB1--------->ANAC58     <------- xxxxxxxxxxxx>smallRNA(i)------>NtERF2                 --------->YAB1   --------->ANAC58    --------- -->At4g35610<---------ATHB12                          <---------ICU4<---------REM1(2)--------->TOE2(3) ---At4g35610--------->MYB46(3)                ----------->GT1 <---------ATHB51  <---------MYB111(2)   gacttcttctgtgcaatcaccttctgccgtcgacgatttctctagggtttggaaaaatcatcacaataatgtacacgcacacaacaacccttaaatatat  5755900  Previous    Next  AGI:  At4g08970.1    Description:  transposable element gene. Mutator-like transposase family, has a 8.1e-28 P-value blast match to Q9SL18 /349-510 Pfam PF03108 MuDR family transposase (MuDr-element domain) Range:  from: 5753158    to: 5755357    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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