Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                    ------>ZmHOX2a(1)                                             --------->At4g35610                                             <---------At4g35610                   <---------AtLEC2                                             --------->ZAT2                        <---------ANAC46                                             <---------ZAT2                        <---------ANAC58                                          <---------At4g35610          <---------YAB1                                     <---------LBD16                  <---------ARR11(3)                                     --------->HSFB2a(2)              --------->AHL20(1)         --------->AtMYB61           <---------HSFB2a(2)              <---------AHL20(1)    ---------     <---------ETT(1)    --------->REM1(2)<---------ZAT2   ----------->ARR10       <---------ANAC58   ttagtttccgacctccaaacgttgctgtgaagaacccatctcggagcagctccttagggcttagttttgcaatatttttgtagttgcttggcccaaaaga  5590700                                          <---------At4g35610                                          <-------GAMYB                                          --------->At4g35610                    <---------ARR11(3)                                         --------->MYB52(2)                   ------->GAMYB                                         <---------MYB46(3)      <---------AHL20(2)                                       <---------MYB52(1)        --------->AHL20(2)     <---------CCA1(2)                <-----------HVH21         --------->AHL20(2)       <---------ICU4   --------->YAB1             <---------AHL20(2)     <---------YAB1  <---------ICU4      --------->YAB1 ->DOF2          --------->YAB1       <-----------TGA1--------->ATHB12       --------->ANAC46   aacactcataacttctcagtcataaacccgatttaaacttcgtcagttgctatggattattgacaaattaatcttttcaacgacatcttactcattatct  5590800                  <---------GLK1(2)                  <---------ARR14(2)                  --------->ARR14(2)              <---------ANAC46              <---------ANAC55(2)                             <---------ARR11(3)              --------->ANAC55(2)                           <---------MYB52(1)             --------->RAP2.6(3)                    <----------DOF2           ----------->TGA1                     <---------ZAT14                            <---------           ----------->HVH21                    --------->ZAT14                           <---------ANAC58       <-----------HVH21          --------->AtMYB61 <---------DAG2         <----------DOF2<---------ANAC58   gatactccttgtcatgacgggattctccctcgtaaaccacaacttgaaactacacttttcccgttatcttcttccttctttgattctgttttgctttgcc  5590900                 ------>ZmHOX2a(2)                     <---------ARR11(3)               <---------ARR11(3)                      --------->ARR11(3)                <---------YAB1               --------->ARR11(3)                      <---------ARR11(1)                --------->ICU4             ----------->ARR10                         <-----------ARR10            --------->LBD16           <----------DOF2                             --------->ARR14(2)         <---------LBD16      ==================HOX2a_HOX2a                    <---------ARR14(2)      ======================    <---------TOE2(2)                                 <---------CCA1(2)        <----------DOF2      <  --------->TOE1(2)                          <---------ANAC46               <-----------GT1     -----  --------->TOE2(2)                  <----------DOF2--------->YAB1          ---------->ID1  <-------- -DOF2<------ZmHOX2a(1) <----------DOF2   <-----------RAV1(1)              <-----------GT1--------->YAB1   ctaacctaggatgctttgatcttcttctttgtcaattgcctttactgttgtgaatcatatcttcccctctcaatgtttttcctttccggtgatgatgatc  5591000           <---------TGA1a           --------->TGA1a           --------->ANAC58           ====================bZIP_DOF           ====================bZIP_DOF           <---------bZIP60(1)           --------->O2           <---------O2           --------->bZIP60(2)           --------->bZIP60(1)           --------->ANAC55(2)           <---------ANAC55(2)           --------->ANAC58        ----------->HVH21        <---------MYB52(1)       <-----------HVH21                                                                           <-       <-----------TGA1                <<<<<<<<<TBF1                                        <-------- ====================bZIP_DOF <---------MYB52(1)                                          <---------- ---------CCA1(2)            --------->LBD16              ------>ZmHOX2a(1)             <-----------HVH21 ->ZmHOX2a(2)       <----------DOF2 <<<<<<<<<TBF1  <---------MYB52(2)                  --------->bZIP60(2) -YAB1--------->ANAC46     <---------LBD16  <----------DOF2          ------>ZmHOX2a(1) <---------CCA1(2)   ccatctctccgtcacgtctcgcctttgtctccggtttcttcttcttctttgcaactaatcctcttcgcatccttctcttctccttggccatatcacaccc  5591100       <---------ANAC58                                                    <---------YAB1       <---------ANAC58                                                  --------->YAB1       <-------GAMYB                                                     <---------ICU4       <------NtERF2      <---------ANAC58                                                  --------->ICU4       <-------      <------MYB83                   --------->At4g35610                <---------YAB1       ------>NtERF2      <---------ANAC58               --------->ZAT2                   --------->YAB1        ---------      <------MYB46(1)                <---------At4g35610              <---------ICU4        <-------- <-----------RAV1(1)           <---------MYB46(3)                <---------WOX13(1)    --------->MYB52(1) ---------DOF2             <---------AtMYB61                    <------------CBF    --------->ANAC46 -ALFIN1<--------P    >>>>>>>>>>>>>>>>>LFY                     --------->ATHB12   --------->TOE2(3) -GT1<---------MYB46(3) --------->ATHB12                      <---------YAB1     <----------ID1   tctttgttgggttgccttatatttctccattggtggttcagctctctctcacatctctccatagatgattgatcatcatgaaaaccacaaaacggtggct  5591200      <----------DOF2                                                              ------->MYC3   ------>ZmHOX2a(2)          <----------DOF2                                    <---------TOE2(2)  <------ZmHOX2a(2)     <---------ANAC46                               <---------ARR11(3) <---------ARR11(3)     <---------ANAC58             ----------->GT1  ----------->TBP    <---------ARR11(3) --------->ARR11(3)     <---------ANAC58    --------->YAB1        ------------>CBF <-------MYC3 --MYB46(3)     <---------TOE2(3)        <----------DOF2        --------->ANAC46 <---------TOE1(2) >ALFIN1        <---------TOE1(3)       <---------ANAC58       <-------TEIL     <---------ALFIN1 -DEAR3(1)      --------->MYB59         <---------ANAC58   <-------TEIL<---------AHL20(1)--------->ARR11(3)   cacgatctctttcaagtttaggttttgcgtttctttttgatggctttcatgaagaaggtgatacatacaccaatatatactcccacgtttagattttaag  5591300                                                                           --------->ARR11(3)                                                   --------->MYB46(3)      --------->AHL20(1)                                               ------------>CBF            <---------AHL20(1)                                         <------MYB83            <---------YAB1                        ----------->GT1  <------MYB46(1)         --------->ICU4  <---------TOE2(3)---                <----------DOF2          <---------ANAC58      <---------At4g35610 <------ZmHOX2a(1)             ------->TEIL                <---------ANAC58xxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)   -------        --------->At4g35610             --------->MYB59xxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)  <---------ANAC46   ttattagggaagatgaacctttgatgggctaaaatatggagttgggtctcacaatcaccgatgtctgatgatggaaatattttgaggaaacttgtgtatg  5591400          --------->MYB111(1)                                          <---------ICU4          --------->MYB111(2)                                          --------->ATHB12          --------->MYB46(2)                                          <---------YAB1          <---------MYB46(3)                                          --------->ICU4         <--------P      --------->DAG2                             --------->YAB1    <---------TOE2(1)   ---------->DOF2                            --------->ICU4                ----    <---------TOE1(1) <------ZmHOX2a(1)                    <------ZmHOX2a(1)               --------->ANAC46 ------>REM1(2)      <----------ID1                  <----------DOF2<---------ICU4    <-------------- >TEIL ------------>MYB.PH3(2)                --------->CCA1(2)    <---------ATHB12  <---------ANAC46   tgtagaacgaggtagttagtaagaggaaaagcatgggctaagtattagagatgggcttagaggaaaacaatgatgattagaatattggtttgtacgaagc  5591500                                                                                    <---------AHL20(1)                                                                                    <---------AHL20(2)                                                                                    --------->AHL20(1)                                                                                    --------->ARR11(3)                                                                                    <---------ARR11(3)                                                        ------>NtERF2          ------->GAMYB                <------MYB83                           --------->DEAR3(1)    --------->At4g35610                <------MYB46(1)            <---------AHL20(2)               --------->MYB52(1)                ----------->GT1           <---------AHL20(1)      <---------YAB1    --------->AHL20(2) ----->TOE2(3) <---------TOE2(3)          --------->AHL20(1)<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2) -AtSPL8       --------->MYB59--------------->AtSPL8   <---------ALFIN1  --------->ZAT6          <---   cttattagtttgtgtattaggtttaaaatcgatatgtacacatatatatttgtatcgccaccttcaatatgaataacacaactgaatatattcagagcaa  5591600  Previous    Next  AGI:  At4g08760.1    Description:  similar to ATNUC-L1/PARL1 (PARALLEL 1), nucleic acid binding [Arabidopsis thaliana] (TAIR:AT1G48920.1) Range:  from: 5584736    to: 5591130    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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