Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                <---------ANAC46                                              <---------ANAC58              <---------MYB52(2) --------->YAB1     --------->YAB1            <---------ANAC58              --------->MYB46(3) ---ARR11(3)        <---------ICU4        <----------DOF2                 <-----------GT1 -----ARR10        --------->ICU4        --------->TOE2(3)      <------ZmHOX2a(1)                   < --CCA1(2)       --------->YAB1       <-----------GT1 <<<<<<<<<TBF1  ----------->GT1<---------MYB52(1)   ttatcagaacataaatctaaaataatgaacaaagtttaagttacctttgcttgttcttcttcagtaggaacaggtttaacaaacccattagtcactggat  5552700                                                  --------->ZAT6                                                 <---------TOE2(3)                                                <-----------GT1                                              --------->AHL20(2)                                       <------MYB46(1)                                       <------MYB83--------->TOE2(3)        <---------ICU4             <----------DOF2           ----------->GT1                  <---------WRKY12    --------->YAB1                    --------->MYB59                --------->ANAC58           ----- ---------ZAT6   <-----------GT1      --------->MYB46(2)             --------->ANAC58      --------->YAB1   tagtgttcataacttctttaaaccctacaaaaattttagtttggtaaatttaacattagtttcaaaaacccaagtcaactattacagagacaagagtaat  5552800                     --------->TOE2(3)                    --------->YAB1                    <--------HAHB4                    --------->ATHB12                    <---------ICU4                   <---------ATHB12                   <---------YAB1                   --------->ICU4             <-----------ARR10                                                                  -----             --------->GLK1(2)                              --------->YAB1                      -----            <---------GLK1(2)                               ------>ZmHOX2a(2)               ---------    <---------AHL20(1)                          <---------ANAC46                            ---------    --------->AHL20(1)                     --------->MYB55(2)                               ---------    --------->AHL20(2)  ---------->DOF2    <---------MYB46(3)                               ---------    <---------AHL20(2)<---------YAB1   --------->ATHB12   <---------ARR11(3)                --------- ---->ICU4<---------TOE2(3)           <---------ATHB12    --------->ARR11(3)               <---------LBD16   gactaattaattaagaatctaatcattaaagctaagacaaatcagtggttgtgtaatgtcgatcttaatcttacagagaccacaatcgtttttcacggaa  5552900                   <------ZmHOX2a(2)                  --------->GLK1(2)                  <---------ARR14(2)                  --------->ARR11(3)                  --------->ARR14(2)                  <---------ARR11(3)                  <-----------ARR10                  --------->ARR14(3)       <---------AtMYB61       --------->MYB59       <---------MYB46(3)    --------->ATHB12 <----------DOF2 ---->ANAC58      <---------ARR14(3)  <---------------AtSPL8              <---------At4g35610 ---->ANAC58     <------ZmHOX2a(1)    --------->DAG2                      --------->At4g35610 >ANAC55(1)  <------NtERF2            <---------------AtSPL3        ---------->DOF2 >ANAC58   <---------LBD16<---------ETT(2) --------->ANAC58     --------->ANAC58 >ANAC58<------MYB46(1)   --------->ETT(2) --------->ANAC58     <----------ID1      <---------AHL20(2) >ANAC55(2)--------->ETT(1)          ---------->DOF2            --------->ANAC58   --------->AHL20(2) >ANAC46<------MYB83------>ZmHOX2a(2)<------------------SPL14 ---------->DOF2  <---------YAB1   gcaaaatgtttggtcgggaggatctttgtctacaatccaaaaagtacggactcaaaaaaaaaaaaaaagccaaaggagatgactattaaatcacgaagat  5553000                                     <---------HSFB2a(2)                                     --------->HSFB2a(2)                                  <----------DOF2                                 <---------DAG2                           --------->ARR11(3)                      --------->AHL20(2)                                  <---------ARR11(3)      <--            <---------ARR14(2) -------->P                        ---------->DOF2         <------ZmHOX2a(1)            --------->ARR14(2)<-----------GT1                 --------->ANAC58       --------->TOE1(2)           <------ZmHOX2a(1)<---------MYB52(2)                --------->ANAC58       --------->TOE2(2)   ggacattgaagaaggatttgaagattaaaaactaaccttttggaaatagtcgttttgggaatcgaagcaaagagaagagcttagaaacgtaggagttttt  5553100                                                                                                    -                                                                                                   <-                                                                                                   --                                                                                                   <-                                                                                                  ---                                                                                                  <--                                                                   <---------AHL20(2)             <--                                                       <-----------RAV1(1)     --------->YAB1     ---                                                    <---------ARR11(3)     <---------AHL20(2)     ---                                                    --------->ARR11(3)    <---------AHL20(2)      <--                                                    --------->GLK1(2)     --------->AHL20(2)     <---                               ---------->DOF2      <---------ARR14(2)----------->TBP       <-------- --------->WRKY18(1)----------->GT1             *TSS--------->ARR14(2)<---------YAB1      <---------YAB1 -------TOE2(3)--------->AHL20(2)           ----------->TGA1      --------->AHL20(2)  <---------MYB52(1)   gaggtcaaacaaacaaaaaaaatggtgactatgtaaagctagagaaatgacgaaaatctgttggactattttataaataaatgatactgtttgtcattga  5553200               <------MYB83               <------MYB46(1)               --------->At4g35610               ----------->GT1               <---------At4g35610              <---------AtMYB61              --------->MYB59              --------->MYB111(2)              <---------MYB46(3)              --------->MYB46(2)     ------>ZmHOX2a(2) ----->ZmHOX2a(2)                                                  --------------->AGL15 --------At4g35610                                                 <---------------AGL15 ------->CCA1(2)                                                <-----------GT1 -----ZmHOX2a(2)                                             <---------ICU4 ------>ARR14(2)                                            <---------ATHB12 -------ARR14(2)                                        <---------YAB1 -------ARR11(3)                                      <-----------GT1 ------>ARR11(3) ----------->HVH21                <---------AHL20(1)                    ----------->GT1 ------>AGP1  --------->MYB111(1)                 --------->AHL20(2)                  --------->MYB52(1) -------AGP1 <---------MYB55(1)                   --------->AHL20(1)             ---------->DOF2 ------GLK1(1)--------->MYB55(2)        <----------DOF2>>>>>>>>>>>>>>>>>LFY  ----------->GT1      <-- ----CBF     <--------P       <---------ANAC46    <---------AHL20(2)        <---------ZAT6   --------   gatctgatctaatgggtaggtgacaaaatatggagtattcaacttttgttattttattaccaatgtttacaatttttagtggtaaaagtaacgaaaaaaa  5553300                                 <---------AHL20(2)                                         <--------                                <---------AHL20(2)                                          <--------                                --------->AHL20(2)                                          <--------                              --------->TOE2(3)                                   <---------AHL20(1)                            --------->AHL20(1)                                    --------->AHL20(1)                            <---------AHL20(1)                    <---------TOE2(3)         <--------      <----------DOF2    --------->AHL20(2)                       <---------TOE1(3)         ---------    ------->TEIL    --------->ANAC58                    --------->TOE2(3)   <-----------GT1 <-------- -----TEIL          ----------->GT1                  <---------GLK1(1)<-------TEIL--------->AHL20(2) ->AHL20(2)         --------->ANAC58          <---------YAB1      --------->MYB59 <---------AHL20(2)   ttcatgaactttgaaatttgagacgaaaaaaatattaattttcgaaatgttattgaaatctcaaaatttaggttgattttacaataaaatggttacgttt  5553400                                                                                               <xxxxx                                                                                         <xxxxxxxxxxx      <xxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                                            --------->ANAC58     --------->MYB59                                                                 --------->ANAC58     <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                                           --------->ANAC46    xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                                           --------->RAP2.6(3) -ANAC55(1)                   <---------DAG2                                       --------->MYB52(1) -ANAC58                      <----------DOF2             <----------DOF2        xxxxxxxxxxxxxxxxxxxx -ANAC55(2)               <---------MYB52(1)          --------->AHL20(2)         ---------->DOF2 -ANAC46  <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)--------->HSFB2a(2)      <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3) >ANAC55(2)       xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)<-----------GT1--------->AHL20(2)xxxxxxxxxxxxx -ANAC58<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3) <---------HSFB2a(2)  <----------DOF2 xxxxxxxxxxxxxxxxxx   tgttgattcggtcattttaggcattgtcgttactttttgttagatgttatagaaaattaactttgttatcttttaaataacaaaaaaacggcatgcctaa  5553500           --------->ANAC46        --------->YAB1       <---------ATHB12                    --------->AHL20(2)     --------->WOX13(1)   <---------AHL20(2)    <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)  <---------AHL20(2)      <-----------HVH21      ---------->ID1 xxxxxxxxxxxxxxxxxxsmallRNA(si3) ---------->DOF2             ----------->HVH21          <---------ANAC58 xxxxxxxxxxxxsmallRNA(le3)<---------AHL20(1)             <---------AHL20(2)             <---------ANAC58 xx>smallRNA(le3)         --------->AHL20(2)             --------->AHL20(2) xxxxxxxxxxxxxxxx>smallRNA(i) xxxxxxxxxx>smallRNA(le3) --------->AHL20(1)    <----------DOF2 <---------bZIP60(2)   <-----------GT1 xxxx>smallRNA(fl3)<-----------GT1 ----------->GT1  <---------TOE2(3)    xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)   aatgactcaatcaacacaacttaaccattttattgtaaagtcaaattaaactttgagatttaaatgacatgtcaaaacttcatggttttttcgtcccaaa  5553600  Previous    Next  AGI:  At4g08690.1    Description:  SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein. similar to SEC14 cytosolic factor family protein / phosphoglyceride transfer family protein [Arabidopsis thaliana] (TAIR:AT1G22180.2); similar to unnamed protein product [Vitis vinifera] (GB:CAO61745.1); contains InterPro domain Cellular retinaldehyde-binding/triple function, C-terminal (InterPro:IPR001251); contains InterPro domain Cellular retinaldehyde binding/alpha-tocopherol transport; (InterPro:IPR001071); contains InterPro domain Cellular retinaldehyde-binding/triple function, N-terminal (InterPro:IPR008273); contains InterPro domain Phosphatidylinositol Range:  from: 5551312    to: 5553148    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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