Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                     <-----------GT1                                <---------ICU4                               <---------ARR11(3)                               <---------AHL20(1)                               --------->ARR11(3)                    --------->ANAC58                               --------->ICU4                        ------------------------>ANAC81                               --------->AHL20(1)                    --------->ANAC58 ---------->RAV1(2)         --------->AHL20(2)                       ----------->GT1 ---SPL7             --------->ANAC58               --------->AHL20(2) --ANAC46            --------->ANAC58 <----------DOF2              ---------->DOF2         <---------YAB1 --ANAC58  --------->YAB1 ----------->GT1     --------->TOE1(3)  ------------------------>ANAC81 --ANAC58 <---------YAB1---------->DOF2       --------->TOE2(3)---------->DOF2         --------->TOE2(3)   gcgcctgaagttattatacctgcaaggaaagaaaatattactttcaaaccctaaaaatataaggcaaaagaaagcaaaaaaaaaaaaaaacttaatattg  5537800                                        <------ZmHOX2a(1)                                      --------->ALFIN1              <---------REM1(1)           --------->AHL20(2)        <------ZmHOX2a(1)              --------->ALFIN1           <---------AHL20(2)     --------->YAB1           --------->ANAC58    --------->ARR11(3)      --------->YAB1        --------------->AGL15          --------->ANAC58  <---------ARR11(3)   agacacaatagaaataaatataaaaaatcaccacaatgaggaggagcaatggagagtttgcaagccttaggtgttgcaagagctcttgtgctattcagtt  5537900                        ------>MYB46(1)                        ------>MYB83                      <---------MYB59                      --------->AtMYB61                     --------->MYB46(3)                    -------->P              <------NtERF2                   <---------ANAC46             ------>NtERF2                    <-------GAMYB             --------->ANAC58              <---------ANAC46                                   <------             --------->ANAC58--------->At4g35610                                              <------            <---------ATERF1(2)      <-------TEIL    ----------->GT1    <---------HSFB2a(2)   <------   caattcccatttcgccagcactaaccaaaccagcacaaatacattgtgggttatattgtaaaacagtttctattccagtacaacacgatttctctggctt  5538000                                               <---------AHL20(1)                                ----               ------>NtERF2                   --------->AHL20(1)                                ----           ----------->HVH21           --------->YAB1                                            ----  <---------ANAC46                    <---------ATHB12                                          -----  <---------ANAC58                  --------->WOX13(1)                           ------>ZmHOX2a(1)<--  <---------ANAC58        --------->ANAC46     --------->AHL20(2)   <---------ARR14(2)         ------ ---ANAC58 --------->ANAC46      --------->ANAC58              --------->MYB52(1)==================== ---ANAC46 <---------ETT(1)      --------->ANAC58  <-----------GT1  --------->ARR14(2)         ------ ---ANAC58------>ZmHOX2a(2)--------->LBD16     <---------ARR11(3)--------->YAB1  <-----------RAV1(1)   agtttcgtttgatccgacaccaaggtacccgagacaatccatcatgctatatattactgtagaacaatcggaacttgatggtcctggtgctggagcacca  5538100                                         --------->bZIP60(1)                                       <------MYB83                                       <------MYB46(1)--------->YAB1      <----------DOF2          <---------AtLEC2      <---------YAB1      ==================================================bZIP_DOF <------ZmHOX2a(1)            <-------TEIL<-----------HVH21 -->MYB83                  <---------ANAC58          --------->ICU4 -->MYB46(1)               <---------ANAC55(1)<---------TGA1a ---->P   <---------LBD16  <---------ANAC55(2)<---------O2 ------>RAV1(1)            <---------ANAC58   --------->TGA1a               --------->ANAC58 ---------RAV1(2)          <---------ANAC46----------->HVH21    <---------ZAT14  <------ZmHOX2a(1) --->AtMYB61--------->LBD16--------->ANAC55(2)--------->O2 <---------YAB1   --------->ANAC58 =========RAV --------->ARR14(2)      <---------AtMYB61 --------->ICU4      --------->ANAC46      <-- --->MYB46(3) <---------ARR14(2)     <---------WOX13(1) <---------YAB1    --------->ZAT6          <--   acaggagactttgccggatttgatttgttacgtgcatggattggtgtcacgagtgatgatgatgagagtagtagtaacacgaaggatagaagaagagatt  5538200                                                                                           <---------YAB1         <---------TOE2(3)                               --------->TOE2(3)              --------->ICU4    <---------ICU4                                      <---------ZAT6                <---------At4g35610    --------->ATHB12                                    ----------->GT1         --------->ATHB12    --------->ATHB51                                   <---------YAB1          <---------YAB1   --------->ICU4                <-------GAMYB        <------------CBF       <---------ANAC58   <---------YAB1      <----------DOF2              <---------YAB1           <---------ANAC58 -------ANAC58        <---------ANAC58     <------------CBF        <---------DAG2<------------CBF -------ANAC58        <---------ANAC58    --------->ATHB12         <----------DOF2<---------WOX13(1)   gcttcattattgatgtttttttttgctttgaagagcgttagagtttattggtttcttattgttaattagctttatgttttcttgattgagatgatgatag  5538300                                                         <---------ANAC46                                                      <---------MYB52(1)                                                    <---------ANAC58                                                    <---------ANAC46                                                    <---------ANAC58           ----------->TBP            ---------->DOF2<-------GAMYB         <-----------TBP         ---------->DOF2<------------CBF                                <----     <---------ANAC46         <------ZmHOX2a(1)<---------ICU4                               ---------     ----------->GT1        --------->MYB59--------->CCA1(2)        <----------DOF2 ------>ZmHOX2a(1)   aagaatggggtttatatatggaagtgaagttaggaaaaagaaaagataagaattgcgttgtttgttttttctttgattttgaagtcctattcttgttcct  5538400                                                                               --------->ARR14(2)                                                                      --------->ATHB12                              ----------->GT1          <---------AHL20(2)      <---------ARR14(2)                    <---------YAB1         ---------->ID1 <---------TOE2(3)<-----------GT1                   <------------CBF       <-------GAMYB--------->AHL20(2)  >>>>>>>>>>WRKY63  <------- ------DOF2      --------->ICU4          <---------MYB46(3)          --------->ICU4         <-------- ->ID1           <---------YAB1          --------->MYB52(2)          <---------YAB1 <---------MYB52(1)   ttaatcttggagattagagattattgttgaataggttattagtttgttgtcatcgattttaatgttttgtgatcatttgactatctgtttttttttttat  5538500                            <---------GLK1(1)                          <---------ICU4                          --------->ATHB12                         <---------YAB1                       <---------ICU4                       <---------ANAC46                       --------->YAB1                       <---------ANAC55(2)                      <---------YAB1                        --------->ANAC55(2)                      --------->ICU4                        <---------ANAC58      <---------AHL20(2) --------->ICU4                     <---------ANAC55(1)           <----------  --------->AHL20(2)--------->YAB1                          ----------->GT1    <---------AHL20(2)  <---------AHL20(2)<---------ICU4                 ----------->GT1 <---------ICU4   <-------TEIL --YAB1            --------->ICU4           --------->YAB1  <---------ANAC58   --------->AHL20(2) ---TBP            <---------YAB1    ----------->GT1       <-------TEIL      --------->YAB1   agaattaattcattatctgttatcatgatgatttctgtttggataatcagatttagtaaaatacgtgaaacattactaaaaataaatacatttgacttct  5538600                                 --------->YAB1                                ----------->GT1              <----------DOF2                       ------->GAMYB                         <---------DAG2              --------->ANAC55(2)        <---------AHL20(2)      <---------YAB1              <----------DOF2              <---------ANAC58       <---------AHL20(2)     --------->YAB1           <---------ANAC58                <-----------GT1  <-------TEIL      --------->MYB52(1)  --------->ATHB12    <---------DAG2 <<<<<<<<<<<<<<<<<LFY -GT1  --------->AHL20(2)    --------->ICU4            <---------ANAC58<---------TOE2(3) <---------ANAC58   catattcattttaattttgaaataacggaaaatgatgataaatcgttggagctagtagggtgcctttttgtttaagaaaacaatgggttttacttgacaa  5538700  Previous    Next  AGI:  At4g08670.1    Description:  protease inhibitor/seed storage/lipid transfer protein (LTP) family protein. similar to protease inhibitor/seed storage/lipid transfer protein (LTP) family protein [Arabidopsis thaliana] (TAIR:AT1G36150.1); similar to xylogen protein 1 [Zinnia elegans] (GB:BAD24657.1); contains InterPro domain Plant lipid transfer protein/seed storage/trypsin-alpha amylase inhibitor (InterPro:IPR003612); contains InterPro domain Plant lipid transfer protein/Par allergen; (InterPro:IPR000528); contains InterPro domain Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140); contains InterPro domain Plant lipid transfer protein and Range:  from: 5536696    to: 5538207    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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