Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                        <---------YAB1            --------->LBD16                      <---------TOE2(3)        --------->ANAC46              ----------------->AGL3        --------->ARR14(2)        --------->TOE2(3)                   <---------ARR14(2)              ---------->DOF2       --------->REM1(1)                   <---------GLK1(1)         ---------->DOF2     ----------->RAV1(1)                   <---------CCA1(2)     <---------At4g35610 --------ANAC58 ------>ZmHOX2a(1)        --------->YAB1          --------->At4g35610 --------ANAC58--------->TOE1(3)        <---------YAB1          ----------->RAV1(1) --------AtLEC2--------->TOE2(3)      <-----------GT1         --------->At4g35610        <-----------GT1 ------YAB1--------->WOX13(1)     <----------DOF2            --------->ANAC46    --------->CCA1(2)<--   tgcttggcaacatcaatccttaataagatagatgagctttttatcatatccgaaatagcctctaagcagcagaaagatgaaagagatgatttagccattc  5512900                                                                        <---------ARR11(3)                                                                --------->GLK1(1)                            --------->GLK1(2)                   --------->CCA1(2)                           <---------ARR11(3)                  --------->ARR14(2)                       ---------->DOF2                         ---------->TaMYB80              <-----                    --------->YAB1 ---------->DOF2          --------->HSFB2a(2)     ----------->GT1                    --------->TOE1(3)                       <---------HSFB2a(2)    --------->DAG2   -        <------ZmHOX2a(2)  --------->ARR11(3)              <---------ANAC46       --------->DAG2    <       <---------ARR11(3)  <---------GLK1(2)     --------->YAB1<---------ARR14(2)---------->DOF2    - --------DOF2       --------->TOE2(3)   --------->CCA1(2)  <---------LBD16 --------->TOE1(2)   <-----   cttttgctagatcaattctcaaccataaagattctttgaaagagatgagactgataacatttcgggatatacaaaatccttggaaaaggtgaatgatgcg  5513000                                                                                                -----          --------->AHL20(2)                                                                    <----      <---------YAB1                                                                           ------    <-----------GT1                                            <------MYB83                    <-----   <---------YAB1                               ---------->ID1 <------MYB46(1)                 <----- <---------ICU4        ----------->GT1    <---------YAB1     <--------P                        ------ ----ANAC58  <---------YAB1           <---------ARR11(3)    <---------MYB52(1)                 ------ ----->ZmHOX2a(1)      <---------ZAT6 --------->ARR11(3)   <------MYB46(1)                    <------ ---------YAB1      <---------HSFB2a(2) --------->YAB1     <------MYB83  <---------ARR11(3)   ------- -------->ICU4      --------->HSFB2a(2)<---------YAB1     --------->MYB59--------->ARR11(3) <-------- ----ANAC58<---------AHL20(2)   --------->TOE2(3)         --------->MYB46(2)    --------->HSFB2a(2)   tccttattactatttattatttctagagttaaaacataaatatcatatttgtttttttgttcggtaggctcttgagatacttcaagaacaagttaagata  5513100          <---------MYB46(3)         <---------YAB1                       --------->YAB1 ---->ARR11(3)                             <------ZmHOX2a(1) -----ARR11(3)                           <---------TOE2(3) --->CCA1(1)                       --------->LBD16 ----GLK1(1)                      --------->HSFB2a(2)--------->ANAC58 ----RVE1(1)                      <---------HSFB2a(2)--------->ANAC58         --------->AHL20(2) --->RVE1(1)                      ----------------->AG<---------STY1(2)    ----------->GT1 --->GLK1(1)                      --------------->AGL15  --------->ANAC58 ----------->GT1 ---ARR11(3)                     ----------------->AGL1  --------->ANAC58--------->DAG2            <- -->ARR11(3)             <----------DOF2--------->YAB1--------->STY1(2) ---------->DOF2         <---- -TOE2(3)<---------TOE2(3)    <----------DOF2<---------YAB1      <-----------GT1     <----------DOF2   tctgagagactatggttgtgcaagagacttttctttcccgaatgaggatgataactagcaagcagtttaaccaaaaaagtttaaattctttagtacttga  5513200                          <---------YAB1                   <---------AHL20(2)                 <---------CCA1(1)                 <---------RVE1(1)                  ------------>CBF                <---------ARR11(3)               <------------CBF   --------->AHL20(2)  <---------AHL20(2)      <---------YAB1         <xxxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)   <---------AHL20(2)  <---------YAB1        <---------ZAT6         <---------At4g35610 --------RVE1(1)--------->ARR11(3)       <---------ZAT14         <-------TEIL                   ----- -----TOE2(3)   <---------GLK1(2)   <---------CCA1(2)         ----------->GT1                  ------   ggtattttattcatgtaagattttttttattatttctcatttcttcagtgttattgcaatagaatggttcatctgtttacaggtatgctcttaagtccta  5513300                                                                 <---------ARR11(1)                                                     <---------ZAT18      --------->WRKY38(1)                                                     --------->ZAT18    <-------GAMYB                                                     <---------ZAT14   <---------ANAC58                                                     ----------->ARR10 <---------ANAC46                                           --------->CCA1(2)     --------->ARR14(2)                                          --------->ARR14(3)     --------->ARR11(3)                                          <---------ARR14(2)     <---------ARR11(3)                                          <---------ARR14(3)     <---------ARR14(2)                                          <---------AHL20(1)     <-----------ARR10        --------->YAB1<---------TOE2(3)   --------->AHL20(1)     --------->GLK1(2)       <---------ATHB12                   --------->ARR14(2)    --------->GLK1(1)       ----------->HVH21                  --------->ARR11(3)    <---------CCA1(2)                 ---   ------------>CBF  --------->YAB1       <---------ARR11(3)--------->ANAC58                  ------- ---->MYB52(1)  ------->TEIL            ----------->ARR10   --------->ANAC58  <-----------RAV1(1) --- >ZmHOX2a(1)    <---------YAB1  <-----------RAV1(1)  --------->ZAT14   <---------ANAC58   <----------DOF2   acgaatgcaatgaccatgaacattgatgatgtccatgttgccaagatattgggagtagactctcgcaaatcttgcgttgtctgtggtatcgtctttaaaa  5513400        <------MYB46(1)        <------MYB83                                                                         <-------       --------->MYB59                                                                   ------->GAMYB      <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                        --------->YAB1        <------------AtMYB77    <---------REM1(1)                                       --------->ARR11(3)          <------------MYB.PH3(1) -------->TGA1                         --------->DAG2       --------->ARR14(2)        <-----------GT1 --->DOF2                            ---------->DOF2        <---------ARR14(2)   ------>ZmHOX2a(1) -------->HVH21          ------>ZmHOX2a(1)      <-----------RAV1(2)             --------->TOE2(3)   gtgacgatgtaggtaacattaggcatcctttgaaaaatgcaaaggtgagaccaggttgaacaaatcttgcataacatggcatcctttgtaactgtctttc  5513500                <---------YAB1                                     <---------MYB59              <----                <---------AHL20(2)                                --------->ANAC55(2)    --------->ANAC58      <-------GAMYB                                               <---------ANAC55(2)    --------->ANAC58     <------MYB46(1)                                         --------------->AtSPL8  xxxxxxxxxxxxxxxx     <---------MYB46(3)               <----------DOF2       --------->HSFB2a(2)    ---------->DOF2     <------MYB83        >>>>>>>>>WRKY6<---------MYB52(1)   <---------HSFB2a(2)   <---------WRKY12    <---------AtMYB61  --------->WRKY38(1)                 xxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)  <---- ---DOF2  <---------ANAC46      <-----------GT1     >>>>>>>ZML2  <-------TEIL---------->DOF2  <------   tcaaggatggttgtgtttttaattgttgactatttttctcctttattttgggttctagtcttctaggtacataactttggaaagtcaaaggaagccatgc  5513600                      <---------DAG2                     <---------ANAC58                                                               -               --------->AHL20(1)                                                                   <               --------->ARR11(3)                                                               -----       <---------MYB46(3)                          <------MYB46(1)                              -----    <----------DOF2  <---------ANAC58          --------->MYB52(2)                   <---------------- -----ANAC58   <---------ARR11(3)          <---------ZAT6                       --------->ARR14(2)  - xxxxxxx>smallRNA(si3)<----------DOF2     <---------YAB1                --------->ZAT6          ----- -----ANAC58<---------TOE2(3)          --------->ARR11(3)     ----------->GT1   <---------ARR14(2)  - ---YAB1   ---------->DOF2         ---------->DOF2 <------MYB83      ----------->HVH21      <--------   ttgagactttggttaaagatattgctttttccaatgtaaaagttattgttagtcggtcatcaatttgtgaaatgacactacgtttctgcaaaatttacaa  5513700                                <---------ICU4 -------->ANAC58                <--------HAHB4 ---------ANAC55(2)             --------->YAB1 ---->ANAC58             <----------DOF2 ---->ANAC46           ------>MYB46(1) -----WRI1             ------>MYB83           <---------DAG2 -------->ANAC58     <---------MYB111(1)    ------->TEIL                              <------ZmHOX2a(1) ---->ANAC58         <---------MYB59  <-----------GT1                                 --------->YAB1 -------->ANAC55(2)------->TEIL<---------ATHB12               --------->ALFIN1      <---------TOE2(3) ---GT1   <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)   <---------YAB1              <---------AHL20(2)   gtaagtaatctctaacatttgaacctactttgaatcattttttctgaaccttttgataaatacagtgttggcaataccattttttttaggataatggttc  5513800  Previous    Next  AGI:  At4g08640.1    Description:  ATP binding / protein binding. similar to chaperonin, putative [Arabidopsis thaliana] (TAIR:AT3G03960.1); similar to unknown [Picea sitchensis] (GB:ABK24472.1); contains InterPro domain Chaperonin Cpn60/TCP-1; (InterPro:IPR002423) Range:  from: 5513310    to: 5514171    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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