Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                  ------>MYB46(1)                                                ------>MYB83                                           ------>MYB83                                   --------->YAB1                           --------->ZAT6  ------>MYB46(1)            --------->YAB1                     --------->ARR14(2)  <---------MYB46(2)         --------->AtLEC2                     --------->GLK1(2)   --------->MYB46(3)         --------->ANAC58 ----->TOE2(3)      <---------GLK1(2)    --------->AtMYB61     ------>MYB83        --------->ZAT6 ----->TOE1(3)   --------->ANAC46  <---------ICU4              ------>MYB46(1) <---------ATHB12<----- -->ANAC46     ----------->RAV1(1)<---------ATHB12--------->TOE2(3) --------->ANAC58           ------   cataaaacctagttttcccacagaatccaactctaaatcatcaccaaaccaatcttatacaaacctagccaagcataaacaatgaatactactcaaacat  5251700                                                          --------->ANAC46                    <---------ICU4                       ------->GAMYB                   <---------YAB1                       --------->MYB46(3)           --------->TOE1(2)                     ------>MYB83           --------->TOE2(2)                     ------>MYB46(1) ----ARR11(3)<---------TOE2(2)              <-----------GT1  ----------->RAV1(1)          --------->ANAC46 --->ARR11(3)<---------TOE1(2)       --------->YAB1     <---------MYB52(2)      ----------->GT1   ctcaattcgcaaacctaggttatcatttcttcgtttcaacaatatttcaccaaattcaacaaacaacacagaccataaaacctagttaatccacaaaatc  5251800                   ------>MYB46(1)            --------->TOE2(3)                 <-----------GT1                   ------>MYB83               --------->YAB1              <---------ATHB12                 --------->MYB46(3)          --------->MYB46(3)          --------->ANAC58                 <---------MYB46(2)          <---------ATHB12            --------->ANAC58         <--           <---------ICU4                   ------>MYB46(1)           --------->MYB46(3)         <---           --------->YAB1                   -------->P            --------->TOE1(1)             <----          <---------YAB1                    ------>MYB83         --------->HSFB2a(2)           ------        <---------ICU4                 ------>MYB46(1)           ------>ZmHOX2a(1)      <---------HSFB2a(2)        --------->YAB1                 ------>MYB83    <---------ATHB12  --------->ANAC46     -------       <---------ATHB12    <---------YAB1--------->MYB46(3)      <---------HSFB2a(2) --------->AGP1   aaactcttaatcatcatcaccaaacaattcttatacaaacctagccaaccatagacaatgaatactcctcgaaccactcaatttacagacctagaaatta  5251900                                                                                                   --                                                                                                   <-                                          --------->MYB52(1)                                      <--                                         --------->ZAT18                                    <------MYB46(1)                                  <---------------------WRI1                                ---------                            --------->LBD16                      --------->GLK1(2)         --------->MYB59 -------ICU4               <---------ANAC46                     <---------GLK1(2)         <---------MYB55(1) ------YAB1                <---------ANAC58                 <-----------GT1               <--------P -------GT1                <---------ANAC58                 --------->MYB52(1)         <---------TOE2(3) --->YAB1                  <---------ANAC55(2)            <---------MYB52(2) <---------DAG2--------->MYB46(2) -->ICU4                   <---------ANAC55(1)         ---------->DOF2       <----------DOF2<------MYB83   tcatttcttcgtttcgccaaattcaacttccgtgaaatcgaagcgaacagagatgaagaaagtaacgattcttactctgctttatctctgaggtaggtta  5252000                                                                                             --------                                                                                             <-------                                                                                             <------ZmHOX2a(2)                                                                                            <--------                                                                                            <--------                                                                                            ---------                                                                                            ---------                                                                                            ---------                                                                                            <--------                                                                                           <---------GLK1(1)                                                                                         <------NtERF2                                                                                        --------->LBD16                                                                                       --------->DEAR3(1)                                                                                      --------->ATERF1(1)                                                                    =================================HOX2a_HOX2a                                  --------->ARR14(2)                ------>ZmHOX2a(1) <------NtERF2                         ----------->HVH21               <---------ANAC58             <---------LBD16                        <-----------HVH21        <---------ANAC46   ================================HOX2a_HOX2a                    <---------ARR14(2)        <---------AtMYB61 --------->ORA47(1)   <---------RAP2.3(1)                    --------->ARR14(2)     <-----------RAV1(1) --------->DEAR3(1)    ------>NtERF2                    --------->GLK1(2)      <---------AtMYB61 <---------At5g28300    <---------DEAR3(1)          --------->ARR14(2)      --------->ARR11(3)     <---------ANAC58           --------->ETT(2) ------->ANAC46    <---------GLK1(2)<-----------------AGL2<----------DOF2         <-----------HVH21 --------LBD16--------->LBD16     <---------ARR14(2)<-----------RAV1(1)          <-----------RAV1(1) -------LBD16 ------>NtERF2       <---------ARR11(3)<---------MYB46(3)      --------->WOX13(1)------>ZmHOX2a(2) -->GT1   <---------ARR14(2)     <---------GLK1(1)  <---------REM1(1)     <---------ATHB12 --------->GLK1(1)   ctcgggactgcatagccgcgagaatctgtgactcgatatctgtttttggtggtgttgttgcttcaccgtccttcaaatcaatcttgtcgccggagatctc  5252100                         <------NtERF2                         <---------MYB52(1)                        <---------RAP2.6(3)                        ------>NtERF2                       --------->ATERF1(2)                       --------->RAP2.3(3)                       --------->DEAR3(1)                       <---------ATERF1(2)                      <------NtERF2                      --------->ATERF1(1) ->GLK1(1)            --------->RAP2.3(1) --GLK1(1)           <---------ATERF1(1)                   <---------ZAT6             --------->MYB52(2) -ARR14(2)           <---------RAP2.3(1)               <---------ZAT14             <-----------TGA1 -ARR11(3)          <---------DEAR3(1)                 --------->ZAT18             <-----------HVH21 >ARR14(2)         --------->ATERF1(1)                 --------->ZAT14            --------->TGA1a >ARR14(3)    <------NtERF2                         --------->ANAC58              --------->O2 >ARR11(3)  <---------DEAR3(1)                 *TSS --------->ANAC58              =================== -ARR14(3) <------NtERF2<-----------HVH21--------->At4g35610                      ===================   catagccgaagtcgtcgtcgagtcgccgtcagacatttctctcagaagaagggcaagtccagtggtaatctctgtgatatacactcgtcagtgggatggg  5252200                      <-------GAMYB                     <------MYB83                 <---------ANAC46                     <------MYB46(1)              <---------LBD16              <---------ANAC46                   <---------LBD16            --------->ARR14(2)              <---------ARR11(3)            <---------ARR14(2)              <---------GLK1(2)            <-----------HVH21               --------->ARR11(3)         xxxxxxxxxxxxxxxx>smallRNA(i)<-----------HVH21                      ----------->GT1      <xxxxxxxxxxxxxxxxsmallRNA(i)<------ZmHOX2a(2)                        --------->ALFIN1   <------     ---------->DOF2--------->MYB59------>ZmHOX2a(2)      ---------->DOF2<---------ZAT2    --------->MYB52(1)     <--------P    <-------TEIL  <---------ARR14(2)--------->HSFB2a(2)   --------->ZAT2xxxxxxxxxxxxxx ===============bZIP_DOF         --------->ARR14(2)<---------HSFB2a(2) <-----------RAV1(2)--------->RVE1(1) =============MYC_MYB----------->GT1<---------MYB46(3)<--------P     xxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)   cattcgggtaagcgggtcgggttcggttaaaacccgatcggttacagatttttcgggtagaaaagtttagaacccaggtggataaatctaaaatatcggt  5252300                                                                                    <---------GLK1(2)                                                                                  --------->LBD16                                                                                <---------LBD16                                                      ----------------->AGL1  <---------ARR14(2)                                                      <-----------------AGL1  --------->ARR11(3)                                                      <-----------------AGL3  --------->ARR14(2)                                                      ----------------->AGL2 --------->CCA1(1)                                                    --------->ZAT18    ----------->GT1                                                    <---------ZAT18   --------->HSFB2a(2)                                            --------->ARR11(3)        <---------HSFB2a(2)                                            <---------GLK1(2)        <---------ANAC46      ----------                                            <---------ARR11(3)      <---------LBD16 <---------ARR14(2)                                         xxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)--------->RVE1(1) ---MYB46(3)                         <---------ANAC46 ----------------->AGL3 <---------GLK1(1) xx>smallRNA(s)         <-------TEILxxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2) <--------P --------->ARR14(2)   tcgatttcggttcgcatctaatcgggttcggattagtttgggtatagatttttgggccctattttggaacttcgggtaaatatccggatttttgagtaaa  5252400                                   <---------AHL20(1)                                   --------->AHL20(1)                                   --------->ARR11(3)                                   <---------ARR11(3)                                <---------AHL20(2)                      <---------ARR11(3)                      --------->ARR11(3)          ----------->GT1       --------->AHL20(2)         <---------TOE1(3)     --------->AHL20(2)         <---------TOE2(3)     --------->YAB1  <---------TOE1(3)   <---------GLK1(2)    <---------MYB52(1)<-------TEIL                         ---  <---------TOE2(3) <---------TOE2(3)  <---------LBD16    <---------ANAC58  <---------ANAC46      --- ->GT1   --------->MYB59    --------->WOX13(1)            <---------ANAC58 <---------LBD16      <----   atttcaggttttaggtaaaatttagattttcaattaaaatattcgggtatttttagttttgggttcgggtttgatttttcggatagaagaatttaagacc  5252500                                                                           <---------ANAC58                                                                           <---------ANAC46                                                                      <------MYB46(1)                                                                      <------MYB83                                                                      <---------MYB46(3)                        <-------TEIL                               <-------GAMYB                       --------->ARR14(1)                         --------->MYB111(2)                       --------->GLK1(2)                          <---------AtMYB61                      <---------GLK1(2)      <---------ANAC58     --------->MYB52(2)        --------->ARR11(3)         <------ZmHOX2a(2)              --------->MYB55(2)        <---------ARR11(3)        --------->AGP1                  --------->MYB111(1)             <-- --->MYB83            --------->ARR11(1)     <---------ANAC58     <---------MYB46(3) <-----------GT1 --->MYB46(1)         <---------ARR14(2) <----------DOF2         <--------P<---------ANAC58       --- -----MYB59           --------->ARR14(2) <---------DAG2         <---------MYB52(1)  <-----------GT1   taatagaataaatcttcgaattcagattcggttttagatccaacttttcgggccaatttcgattcgggttgttggtttcgggtttttttcccagccctac  5252600  Previous    Next  AGI:  At4g08310.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G44780.2); similar to unnamed protein product [Vitis vinifera] (GB:CAO61850.1) Range:  from: 5248861    to: 5252147    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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