Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                            ------>ZmHOX2a(2)                                                                         <------ZmHOX2a(2)                                                           --------->AHL20(2)                                                           --------->AHL20(1)                                                     --------->ANAC46   --------->AGP1                                                     <----------ID1     <---------ARR14(2)                                                     ----------->GT1    <-----------ARR10                                                     --------->ANAC58   --------->ARR14(2)                                              --------->ANAC58          <---------ARR11(3)                                              ----------->GT1           --------->ARR11(3)                                              <---------ANAC55(2)       <---------AGP1              <                          <---------ZAT18     --------->ANAC55(2) <-----------GT1                   <                          --------->ZAT14     --------->ANAC58 --------->AHL20(2)                  <-                          <---------ZAT14   <--------P     <---------AHL20(2)                  ------                   --------->ZAT14        ----------->GT1 --------->AHL20(2)                   ------ ------ICU4        <---------ZAT14   <-----------GT1 --------->ANAC58  <---------CCA1(2) ------>ZmHOX2a(2)   cattagtattttagtaacaagtatacagtgctcaacaattaacaaggtaagtaatacgaaaaaaattatatccagatctaattgttagtgatcccacaag  5229900                                                                      ----------->HVH21                                                                     <---------MYB52(2)                                                                    --------->ANAC58                                                                    --------->ANAC58                                                               --------->ANAC58                                                               --------->ANAC58                                                           <-----------GT1       <xxxxxxxxxxxxxxxxxxx                                                         <---------MYB52(2)     --------->ANAC58                                                   <---------TOE2(3)--------->ANAC55(2)         <---------MYB52(2)        <------ZmHOX2a(1)    --------->ANAC58        --------->ANAC58  <-- --------------->AtSPL8    --------->ANAC58        --------->DAG2   --------->ANAC46             <--- <---------------AtSPL8    --------->ANAC58    <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)              ---- ---------ANAC46       --------->ANAC58--------->ANAC58 --------->ANAC58 <---------ANAC46        ---- ---------ANAC55(1)    --------->ANAC58--------->ANAC58 ----------->GT1--------->MYB52(1)        ---- ------TEIL          ---------->DOF2 <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)    <--------P         ---- --->ANAC58    ----------->GT1<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)  --------->ANAC55(1)          ---- --->ANAC58--------->MYB52(1) <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)   <---------ANAC55(2)          ----   ttacatgtacaaataacgagtaacaaagcaagtaataggataagcatcaaaataaggcaagtaacaagacaagtaacggggtaagcatcaaatcgagaca  5230000         --------->ANAC58                                                   <---------ANAC58         --------->ANAC58                                               <---------ANAC58    --------->ANAC58                                                 <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)    --------->ANAC58                                             <-----------GT1 xxxxsmallRNA(i2)                                             ----------->GT1 -------MYB52(2)                                <---------AHL20(1) <---------ANAC58 ------ANAC55(2)                                --------->AHL20(1) <---------ANAC55(2) ----->ANAC46                                   --------->AHL20(2) <---------ANAC58 ------->GT1                       <---------ARR14(2)    <----------ID1 <---------ANAC58--------->ARR14(2) ----->ANAC58                      --------->ARR14(2)   --------->DEAR3(2)  <---------ANAC58 ----->ANAC55(2)          <---------YAB1        <---------AHL20(2) --------->ANAC55(2)  <---------ARR14(2) ----->ANAC58         --------->AHL20(2)     --------->YAB1   --------->ANAC58     <---------ANAC46 ----->ANAC55(1)      <---------AHL20(2)    --------->AHL20(2)--------->ANAC58  ----------->HVH21   agtaacaaggcaagtatcaaacatttttatgactgagtatttgcaaataataaaataaaccgacaagttacttgacttgcctatgacgagtatttgaatt  5230100                                  ------>NtERF2                                 <---------ANAC46                              ------->GAMYB                             <------------AtMYB77                             --------->MYB46(3)                            xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                           --------->MYB52(1)                             <---------ZAT2                           --------->ARR14(2)                             --------->ZAT2       <-----                           <---------ARR14(2)                             --------->At4g35610  ------                      <---------ANAC46                         <----------DOF2                -------                  --------->REM1(2)----------->GT1             <---------DAG2         <----------DOF2   ttcaagatgaatacgagccgagtagcgaataactgccgagtaacaaatacttgagcccaggcctactttttataagagctgggatgccctttaagagtgc  5230200                   <---------YAB1                 --------->YAB1              --------->YAB1             --------->ICU4--------->AHL20(2)             <---------ATHB51             <---------AHL20(2)             --------->AHL20(2)                 <---------At4g35610          --------->AHL20(2)                    --------->At4g35610       ----------->GT1     <---------AHL20(2)<---------ATHB12       --------->YAB1   --------->TOE2(3)<------NtERF2      <---------YAB1  ------->TEIL      --------->RAP2.6(2)                                 <--------  --------->YAB1<---------YAB1   --------->CCA1(2)                                        --------->ANAC58 ----At4g35610-------->ATHB1    --------->ARR11(3)                               <---------TOE2(3) --->At4g35610<---------ICU4    --------->AHL20(1)           ---------->DOF2    --------->YAB1 -->ALFIN1<---------AHL20(2)   --------->AHL20(2)     ---------->DOF2 ---------->DOF2     --------->ANAC58   tgaatcatatgataaattattatgaacattaaaatatatgggccgaaatcatctgataaagaataaaggcccaaaagcccattaagaataccaagaaatt  5230300                                                   <---------GLK1(1)                                            <---------ZAT2        ----------->GT1                     --------->At4g35610        --------->At4g35610          <       <---------HSFB2a(2)                  --------->ZAT2         --------->ARR14(2)               <      ----------->GT1                       <------NtERF2    <----------DOF2                  ------- -ARR11(3)             *TSS ---------->DOF2 <---------At4g35610    <---------ARR14(2) <-------TEIL <-   ttggaaaatcgagaaaaatggtggaagacacaaagacacaaatggcagcagcgatatcagcgactttggtattcgctgcaagacgacgtccattgttctg  5230400                                                                     <---------ANAC58                                                                 <-------GAMYB        <---------ICU4                                          <-----------RAV1(1)       <---------YAB1                                           --------->MYB111(2)     --------->YAB1                                             --------->MYB55(2)                 --    <---------YAB1                      <---------ANAC58        --------->MYB52(2)                 -- ---------ANAC58                    ---------->DOF2             <---------MYB46(3)           -------- ---------ANAC58                --------->ANAC46   --------->ANAC46  <---------ANAC58        <------- -------->AtSPL8            ------>MYB46(1)     --------->ZAT14 --------->MYB111(1)  ---------->DOF2 --------At4g35610          ------>MYB83<---------ANAC58       <--------P     <---------AtMYB61    --   tagcttatcatcatcgtcttcttcgaaaccaaacacgagaaagcttgttctatactccaaacctggttgttgcctctgcgatggtcttaaagagaagctt  5230500                                                                                <---------YAB1                                                                              -------->HAHB4                                       ------->GAMYB                          --------->YAB1                                    --------->MYB52(1)                        <---------ICU4   ------>NtERF2                 --------->ANAC46                            --------->ICU4 ------->ANAC58                  --------->ANAC58                          <--------HAHB4 ------->ANAC46           ------>ZmHOX2a(1)                                <---------ICU4 ->HSFC1(2)               <---------YAB1                                  <---------YAB1         <--- --HSFC1(2)               --------->ICU4   <---------MYB52(1)             --------->ICU4   <--------- ------->ANAC58  <---------ALFIN1--------->ANAC58<-----------HVH21      --------->YAB1---------->DOF2   cacgctgccttcactctctccaccggtcctgattcactcaacgacgttactcttcaggtctcactaatctaatctcataattatgattcaaagcttttta  5230600                                     <------MYB46(1)                                     <------MYB83                                   <--------P                                  <-------GAMYB                                 <---------MYB46(3)                                <---------YAB1                                <---------TOE2(3)                            --------->ARR14(2)                            --------->ARR11(3) ------YAB1                 <---------ARR14(2)                                            ---------->ID1 -DOF2                     <------ZmHOX2a(1)      <-------TEIL  ------->TEIL            <-----------RAV1(1)   aaattgtattagagacttgttggaatggaggattttggttggattaagtagatgcaattgaacatgaaccctcaaaattggagttgaattttgtggcatt  5230700                  <------MYB83           <---------ARR14(2)                 --------->MYB59         --------->ARR14(2)             <---------ZAT6       --------->ALFIN1          <---------ANAC58            <---------YAB1        <-------GAMYB<-----------HVH21<---------ANAC46            ---------         <---------AHL20(2)     <---------ANAC58            <---------ANAC58--------->ARR14(2)       <---------YAB1           <---------ANAC58      <----------DOF2   <---------LBD16     <--------    --------->ICU4<------MYB46(1)xxxxxxxxxxxxxxxx>smallRNA(s)  <-------TEIL <---------ARR14(2) <---------YAB1<---------MYB52(1)<----------DOF2 <---------ANAC46  <---------MYB52(1)      --------->ARR11(3)   gttgtgattatgttattgttaggtttaggcctgggcgtttgggtattcgggtcgggttttttgggttcgggtatttcggatttagaaatctaagacctgt  5230800  Previous    Next  AGI:  At4g08280.1    Description:  similar to unnamed protein product [Vitis vinifera] (GB:CAO61844.1); contains InterPro domain Glutaredoxin 2 (InterPro:IPR008554); contains InterPro domain Thioredoxin-like fold (InterPro:IPR012336); contains InterPro domain Thioredoxin fold (InterPro:IPR012335) Range:  from: 5230323    to: 5232193    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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