Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                     --------->YAB1                            ------>ZmHOX2a(2)                               <---------MYB111(2)                 <---------AHL20(2)                               <---------MYB46(2)              <---------AHL20(2)                               <---------MYB52(2)             <---------AHL20(2)                               <---------MYB111(1)            --------->ARR11(3)                               --------->MYB46(3)             --------->AHL20(1)   --------->ZAT18             <---------MYB55(2)             <---------ARR11(3)   <-------TEIL     ------->GAMYB--------->MYB52(1)           --------->AHL20(2)         <----------DOF2 -------->At4g35610 --------->TOE2(3)                         <---------AHL20(1)  --------->TOE2(3) --DOF2             --------->ANAC46                         --------->AHL20(2)------>ZmHOX2a(1)   -- ------>AGL15       --------->TOE1(3)                    <---------YAB1     <------ZmHOX2a(2)      <- -------AGL15     <---------At5g28300                  --------->YAB1      <---------ARR14(2)      -- --------AGL3    <-----------GT1------->GAMYB         <---------YAB1       --------->ARR14(2)    ----   ttagatgcactatacattttaaccgtaatcccaactaacatactaagaaaacacatattataaatatatttgattcggatccttcattaatcttttgcta  5200400                                                                                          <xxxxxxxxxx                                                                                          <----------DOF2                                                                                          <---------DAG2                                                                                        ------->TEIL                                                 <---------ANAC58                     <xxxxxxxxxxxxxx                                                 <---------ANAC58                     <xxxxxxxxxxxxxx                                              <xxxxxxxxxxxxxxxxsmallRNA(i)           --------->ANAC55(2)                                             --------->CCA1(2)                       --------->ANAC46                                  <---------AHL20(1)                              --------->ARR14(2)                                  --------->ARR11(3)                              <---------ARR14(2)                                  --------->AHL20(1)                      ----------->HVH21                         <---------AHL20(2) <---------GLK1(2)            xxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)           <---------MYB52(2)     <---------ARR11(3)       <---------ARR11(3)    --------->DOF5.7(2)     xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)  --------->ARR14(2)    <---------TOE2(3)  --------->ANAC58 ------->ANAC58       <---------AHL20(2)    <---------ARR14(2)    <---------TOE1(3)  --------->ANAC58 ---------ID1--------->MYB52(1)   --------->AHL20(2)       --------->AHL20(1)   <-------MYC3 ------->ANAC58      --------->AHL20(2)  --------->LBD16   <---------AHL20(1)   ------->MYC3       -- ------>DOF2 <-----------GT1      <---------AHL20(2) --------->TOE2(3)xxxxxxxxxxxxxxxx>smallRNA(s) <-   aaagccaaaaacaaataacgacattaaataatccaatatattccgagatttgcttcgtcaatatttttaagggaatgtgacacgtttacgcacttttaga  5200500                                                                                  <xxxxxxxxxxxxxxxxsmallRNA(s)                                                                                  <xxxxxxxxxxxxxxxxxx                                                                                  <xxxxxxxxxxxxxxxxxx                                                                                 <xxxxxxxxxxxxxxxxxxx                                                                                 xxxxxxxxxxxxxxxxxxxx                                                                                 xxxxxxxxxxxxxxxxxxxx                                                                                <xxxxxxxxxxxxxxxxxxxx                                                                                <xxxxxxxxxxxxxxxxxxxx                                                        <xxxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                                                        xxxxxxxxxxxxxxxx>smallRNA(i)                                                       xxxxxxxxxxxxxxxx>smallRNA(i)                                                      <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                                                     <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(l2)                                                     <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                                     <---------ANAC58           <xxxxxxxxxxxxxxxxxxxx                                                    <-----------------AGL1      <xxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                                                    <---------TOE2(3)           <xxxxxxxxxxxxxxxxxxxx                                                   <-----------GT1           <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                                                   <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                                   xxxxxxxxxxxxxxxx>smallRNA(i) <xxxxxxxxxxxxxxxxxxxx                                                  <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                                               <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)             -----                                           xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)<xxxxxxxxxxxxxxxxxxxx                                      --------->HSFB2a(2)                    <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                   <---------DAG2<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)          <----                                   <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)     <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                                  <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)     <-----------RAV1(2) -----                                <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)       <-------TEIL   xxxxxxxxxxx                               <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)       <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                             <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)      <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                             --------->MYB59   <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3) <xxxxxxxxxxxxxxxx                            <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)       <xxxxxxxxxxxxxxxxsmallRNA(i)                            <xxxxxxxxxxxxxxxxxxxxsmallRNA(le3)         <---------TOE1(2)<---------ANAC58                            <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)      <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                         <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)         <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                       <---------------AGL15<---------ARR11(3)        <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                       <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)          xxxxxxxxxxxxxxxx>smallRNA(i)                      <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)         <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                      <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)      <----------DOF2<xxxxxxxxxxxxxxxxxxxx                      --------->ZAT6  <---------HSFB2a(2) <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3) <----                      <-----------------AGL1--------->GLK1(2)   --------->HSFB2a(1) <xxxxxxxxxxxxxxxxsmallRNA(s)         <----------DOF2<xxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)    <---------HSFB2a(1)<----------DOF2 --------->YAB1 xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)<---------ANAC58<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3) --------->TOE2(3)  <-----------GT1<----------DOF2<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3) <---------ANAC58 xxxxxxxxxxxxxsmallRNA(le3)<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3) xxxxxxxxxsmallRNA(le3)<xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)  <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3) xxxxxxxxxsmallRNA(si3)--------------->AGL15--------->ARR11(3) xxxxxxxxxxxxxxxx>smallRNA(s)    <----- ------->ARR11(3) <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)xxxxxxxxxxxxxxxx>smallRNA(s)<---------DAG2 --------ARR11(3)----------->GT1<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)   ctatcttattcctttgggaatgttacactattaggcacttttagaaaatctttttacgtttgaggcactttccaaggttcaggcacttttccttgtttct  5200600      ---------->DOF2 ----------->GT1 xxxxxsmallRNA(i2) xxxxxsmallRNA(si3) xxxxsmallRNA(le3) xx>smallRNA(si3) xx>smallRNA(le3)                                                                                 xxx xxsmallRNA(l2)                                                                                <----- xxsmallRNA(fl3)                                                                               ------ xxxsmallRNA(le3)                                                                              <----- xxxsmallRNA(fl3)                                                                              <----- xxsmallRNA(si3)                                                                               ------ ---->HSFC1(1)                                                                                 ------ xxxxsmallRNA(le3)                                                                            ======= -----HSFB2a(2)   <-----------GT1          ----------->GT1                                    <------ ---->HSFB2a(2)--------->AHL20(2)        <------------CBF                                     <------ xxxxxxxxxxxx>smallRNA(si3)         --------->TOE2(3)        <------MYB46(1)                  ------- xxxxxxxsmallRNA(fl3) ------>ZmHOX2a(1)--------->AHL20(2)    <------MYB83                     ------- xxsmallRNA(le3) <---------CCA1(2)  --------->TOE1(3)     <------------CBF            --------->AHL20(2) -----HSFC1(1) --------->YAB1    <-----------GT1<-----------GT1 <XXXXXXXXXXXXXXXXXXXXMIR2939  <------ ----LBD16------------>CBF     --------->AHL20(2)        --------->ATHB12             <---------AHL20(2)   ggaagataaaaagacaattatatcctttccaaattaaaccataaattgtttaaccagttcgattggttttgttttctgtgttatctaataaaacacacgt  5200700                                  ------>ZmHOX2a(2)                                --------->ARR11(3)                                <---------ARR11(3)                                --------->ARR14(2)                                --------->ARR14(3)                                <---------ARR14(2)                                --------->AGP1                                <---------ARR14(3)                              ----------->ARR10                          <-------GAMYB                         <---------DEAR3(2)                         <---------MYB46(3)                        <---------DEAR4(1) xxxxxxxxxxxxxxxxxx>smallRNA(se3)<------ZmHOX2a(2) --MYC3                 <---------DREB2C(2) ->MYC3                 <---------At1g77200 --MYC2                 <---------ANAC46 --MYC4                 <---------DEAR3(1) ->MYC4               <-----------HVH21 ->MYC2            <---------ANAC55(1)                                            <---------RVE1(1) =================================MYC_MYB                                  <---------AHL20(2)       - ---ANAC55(2)      --------->ANAC55(2)                                    <---------AHL20(2)    ----- ---TGA1a          <---------ANAC46                                       --------->AHL20(2)   <----- -->TGA1a          <---------ANAC58          ---------->DOF2      <---------At5g28300          xxxxxx -->O2             <---------ANAC58    --------->At4g35610    <---------ICU4      <---------CCA1(1)<- ---O2             <---------ANAC55(2) <---------At4g35610  ------------>CBF   ----------->GT1 ------   gtaatacatgttccttctatttcgtgtcggttgagatcttgagatgagaaagagagttatctcacaattacagcaaataaatggatatttttaaaaaata  5200800                                                          --------->At4g35610         <-----------RAV1(1)                              <---------At4g35610   --------->AHL20(1)                                    --------->ANAC46   --------->ARR11(3)                                   <---------LBD16           --------->YAB1   <---------AHL20(1)                               <-----------ARR10            <------ZmHOX2a(2)   <---------AHL20(2)                          --------->ARR14(2)               <---------ARR11(3) -------->AHL20(2)                             <---------ARR14(2)              <---------GLK1(1) ---->AHL20(2)                                 --------->GLK1(2)     <---------ATHB12 ----AHL20(2)                         <---------YAB1--------->ARR14(2)   <---------AtLEC2 --------->ANAC55(2) xxxxxxxxxxxxxxxxx>smallRNA(se3)  <---------GLK1(2) <---------ARR14(2)--------->YAB1      <---------ANAC55(2) --------AHL20(2)                ------>MYB46(1) ------>ZmHOX2a(2)  ------>MYB46(1)       ----------- --->AHL20(2)                    ------>MYB83 <------ZmHOX2a(1)     ------>MYB83--------->ARR11(3)   aataatatatagtgtcgctcttcatctctaaaaccaaattcttatggaggatcggttctccgctatcaccaatcttcatggagatcataaacaggtaatt  5200900                                                                --------->ATHB12                                                      <---------YAB1          <---------At4g35610                        --------->MYB59              xxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)                        <---------TOE1(3)          --------->GLK1(2)          --------->At4g35610                <-----------GT1                   --------->ARR11(3)       <---------At5g28300 >GT1     <-------TEIL  <---------TOE2(3)         <---------ARR11(3)   --------->WOX13(1)<------ZmHOX2a(1)   tcaaacttcaaattcatttttcaatttaggtttagaattgaatcgaattggagattttgattcaattgattagcaattacagctcaaattaggatttagg  5201000                           --------->ARR14(2)                 --------------->AGL15                 <---------------AGL15                ----------------->AGL3                <-----------------AGL3                                                    <--------HAHB4          --------->ANAC58 <---------GLK1(2)                                              --------->ATHB12          --------->ANAC58<------ZmHOX2a(1)   <---------LBD16                           --------->GLK1(2)      --------->YAB1     <---------YAB1    <---------ANAC46 --------->GLK1(2)     <-----------GT1   gattggattaataagctatctaaaattaggattcttcatgatgttgtttggggaaaattgaaattctaaatagaattagaagttttacagaatcatttga  5201100                                                               <---------YAB1                                                               --------->ICU4                                                             --------->YAB1                     -----                                                            <---------YAB1   --------->ICU4   <------MYB83                    ------->TEIL                        <----------DOF2 --------->ANAC46      <------MYB46(1)           --------->ATHB12       <---------ANAC46     <---------ANAC58 --------->ANAC58  <----------          <---------YAB1        <---------ANAC46       <---------ANAC58 --------->ANAC58xxxxxxxxxxxxx   tacaattgtatagttattgatgaatctctatgtattgtgtattctaaacgttgttttgctttgtgataatttgcaggcaatatttggagtctatgttggt  5201200               <---------At4g35610               --------->ZAT2             <---------RAP2.6(2) <---------ARR11(3)                   ---------->DOF2               -          --------->DAG2         --------->ARR11(3)               <------MYB83                   ----     ----------->GT1       <---------ZAT2                         ----------->GT1                <---    <------ZmHOX2a(1)      <---------At4g35610                    <------MYB46(1)            -------- ---->WRKY18(1)--------->At4g35610                            --------->MYB111(2)         --------->At4g35610 -RAV1(1)---------->DOF2   --------->At4g35610                --------->MYB111(1)         <---------At4g35610 xxxxxxxxx>smallRNA(le3)   --------->ZAT2           <---------HSFB2a(2)    --------->CCA1(2)---------   catggaggagttaaagcggctgagtttgcagctaagaacttagataagaacattgtagaagaagtagttggtaaaagacacgagttggagatagctgaag  5201300  Previous    Next  AGI:  At4g08260.1    Description:  protein phosphatase 2C, putative / PP2C, putative. similar to protein phosphatase 2C, putative / PP2C, putative [Arabidopsis thaliana] (TAIR:AT2G30020.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO21431.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN71723.1); contains InterPro domain Protein phosphatase 2C-related; (InterPro:IPR001932); contains InterPro domain Protein phosphatase 2C; (InterPro:IPR015655); contains InterPro domain Protein phosphatase 2C, N-terminal (InterPro:IPR014045) Range:  from: 5200844    to: 5201862    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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