Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                      --------->YAB1                                                                 --------->WOX13(1)           --------->TOE1(3)                 --------->YAB1    <---------ATHB12                     <          <---------At4g35610              ------>MYB83     <XXXXXXXXXXXXXXXXXXXXMIR864-5P  <--------  ---------->DOF2                          ------>MYB46(1)<------MYB83<---------YAB1    --------->ARR11(3) ----YAB1<---------TOE2(3)         ---------->DOF2       --------->MYB59         <------ZmHOX2a(1)  - --At4g35610      --------->AHL20(2)     <---------MYB59<--------P <---------ATHB12    <---------At4g35610 >GLK1(2)<---------TOE1(3)<----------DOF2--------->AtMYB61<------MYB46(1)      <---------TOE2(3)   <-   ataagaaagttaagcttagataaaatccctttagaaacaaagaccaaacataaaacaagttggtaatcaatcatacttgataaggatgcagatgttgata  5086200              <---------ICU4             --------->ICU4             <---------YAB1        <---------At4g35610        <-------GAMYB       --------->MYB55(2)     <------NtERF2     --------->At4g35610     <-------GAMYB     <---------At4g35610    <---------ERF1    <---------RAP2.3(1)    ------>NtERF2   <---------RAP2.3(2)   <---------DEAR3(1)   <---------RAP2.3(3)   <---------RAP2.6(2)  --------->ATERF1(1)                                                         --------->bZIP60(1)  <------NtERF2                                                               <---------bZIP60(2) <---------DEAR4(2)                                 ---------->DOF2           <---------bZIP60(1) <---------ATERF1(1)                         --------->ALFIN1              ----------->HVH21 <---------RAP2.3(1)                         ----------->HVH21        <---------MYB46(3) ---------DEAR3(1)                         --------->LBD16         <------MYB46(1) -YAB1 <---------MYB46(3)                <---------LBD16          <---------DEAR3(1) -------->ALFIN1        --------->ARR11(3)<---------ANAC46    <------ZmHOX2a(1) -----ZmHOX2a(1)       <------ZmHOX2a(1) <---------------------WRI1<------MYB83      <---------MYB46(3)   aggaggcggctgttgataattaagaggatgttgttgagcgacttgcggtgatggcaaagaaataggagtcggtgtttgtgacctcgctgggtactgagaa  5086300                                                                             <---------YAB1                                                                             ------>ZmHOX2a(1)                                                                  --------->At4g35610                                                        <------MYB46(1)   ===========================                                                        <------MYB83     <---------ARR14(2)                                                       --------->ALFIN1  <---------ARR11(3)                 <---------WOX13(1)              --------->MYB52(1) ----------->HVH21               --------->ATHB12               --------->YAB1<------NtERF2--------->ARR14(2)        <-              <---------YAB1         <---------ANAC46  <---------AtMYB61 --------->ARR11(3)       ---          --------->HSFB2a(2)        <---------ANAC58  --------->MYB111(2)<------ZmHOX2a(2)   <------          <---------HSFB2a(2)        <---------ANAC58 <--------P  <---------At4g35610      <---------ALFIN1   ggaagcgttgctctagatgattgagtcactgaattagtcgcgttcgaagaataagggttggaggcatgagatgacgatcctcattcggttctctcacctc  5086400                                                                             <-----------HVH21                                                                            --------->YAB1                                                                            ------->GAMYB                                                                          -------->P                                                                        <---------MYB111(2)                                                                        --------->MYB46(3)                                                                       <---------At4g35610                                                                      --------->ANAC46                                                                      --------->ANAC58         <---------ALFIN1                                             --------->ANAC58        --------->MYB46(3)                                           <---------HSFB2a(2)   <---------ARR14(2)                                                --------->HSFB2a(2)   --------->ARR14(2)                                            <----------DOF2  --------->LBD16  <---------MYB52(1)                   <---------ALFIN1         <---------DAG2  <---------LBD16 --------->LBD16                       --------->ANAC46        --------------->AGL15 ====HOX2a_HOX2a                 <---------ARR14(2)            <---------------AGL15 --------LBD16              ------>ZmHOX2a(1)                 ----------------->AGL2 --->ZmHOX2a(1)      <---------ALFIN1 --------->MYB46(3)    <-----------GT1 --------->AtMYB61    ---- ---ALFIN1      --------->ZAT14  --------->ARR14(2)       <---------GLK1(1)--------->MYB46(3) -------   ctccggttctcccaccagttctctcacctccttcggttctcccaccatggcctctacttgatttcccctttccagcaaccatcacggagaacaaaataat  5086500                                  ----------->GT1                                  <---------ANAC46                                  <---------ANAC58                          --------->CCA1(2)                          <------ZmHOX2a(2)                         --------->ARR11(3)                         <---------ARR11(3)                    <------ZmHOX2a(2)                         --------->ARR14(2)                    ==================HOX2a_HOX2a                         <---------ARR14(2)                   --------->ARR14(2)                <----                         --------->AGP1                       <---------ARR14(2)               ------                     ---------->DOF2                     --------->GLK1(2)                   -------- ----->YAB1 <------ZmHOX2a(1)     <---------ANAC58  ---------->DOF2       <------ZmHOX2a(1)  -------- -->YAB1    =====================HOX2a_HOX2a    <<<<<<<ZML2   --------->AGP1          --------->LBD16   caaattgagagagaggagattgagaaagatccaattgagtgaaaaccctagaacaaaagaatcagatcgagtttgaggagagaaaccccagagaaattct  5086600                                                        --------->AHL20(1)                                                        <---------AHL20(1)        --------->ARR14(2)                              --------->AHL20(2)    --------->HSFB2a(2)               <----------DOF2   <---------AHL20(2)   <---------ANAC46           ---------->DOF2        --------->YAB1                   --------->ANAC58 -----YAB1                   <------ZmHOX2a(1)    ----------->GT1                     --------->ANAC58 --->TOE2(3)     ----------->GT1     *TSS     <---------MYB46(3)                    ---------->DOF2 ->GLK1(2)  <---------HSFB2a(2) ----------->GT1 <--------P    ---------->DOF2  <-----------HVH21 ->ICU4 <---------ARR14(2) <---------TOE2(3)  --------->MYB55(2)         ---------->DOF2        -----   tagtgtcgagaattcgagatagagaaaatgaggaaagtgacttttcagtggttagtaataaaataaaaggagtcgcaaagtcgtcacaaagcaaaaaaca  5086700                                                                          ----------->GT1                                                                          <---------ANAC46                                                                        <---------ANAC46                                                                   --------->AHL20(1)                                                                   <---------ARR11(3)                                                                 --------->AHL20(1)                                                                 --------->ARR11(3)                                                                 <---------ARR11(3)                   --------->ANAC58                 --------->YAB1 <---------AHL20(1)                   ----------->GT1           ------>NtERF2--------->TOE1(3)                   --------->ANAC58       <---------At5g28300    <---------AHL20(1)              <--- <---------ZAT6  --------->MYB52(1)      <-----------GT1  --------->TOE2(3)                      <--- ---->TOE2(3)  <---------MYB52(2)----------->GT1   <---------ATHB12--------->ARR11(3)           -----   ttagtcttaacttagtcacaaacgaaaaaacacgagggataatttaccgcctaatcaaaaccctaaaaatattttcgcgtaaatacaatagtcgcaattt  5086800                                           --------->ANAC46                                           --------->ANAC58                                           --------->O2                                  <---------TOE2(3)                                           =================bZIP_DOF                    <-----------GT1                                           <---------TGA1a                             <-----------GT1                            --------->DAG2 --------->TGA1a                         <--------HAHB4                          <---------MYB52(1)                                       --------->ATHB51                         <---------SPL7    --------->ANAC58                       <---------ATHB51                    <-------TEIL           --------->bZIP60(2)               --------->ANAC58                  <---------ARR14(2)       <---------O2           --------->CCA1(2)-------->ATHB1                  --------->ARR14(2) <xxxxxxxxxxxxxxxxsmallRNA(i)--------->ARR14(2)<---------AHL20(2) ---MYB83        ------>MYB46(1)  <---------ZAT6               --------->DREB2C(2)--------->ICU4 ---MYB46(1)     ------>MYB83  --------->ALFIN1  <----------DOF2 <---------ARR14(2)--------->AHL20(2) ---->MYB59 <-----------GT1--------->SPL7<---------ALFIN1  --------->MYB46(3)--------->ANAC58      <-   ggtctcaatgtttgtcaccaaattcgtcgtaaggtagtggcaaacacgtcgctattttgtgaccaccgatatgagtcacaaacaattatttaacatttct  5086900                                                                                              <------                                                                                          --------->ATHB12                                                                                          <---------ICU4                                                                                          --------->YAB1                                                                                 <------ZmHOX2a(1)                                              ------->GAMYB                     ----------->GT1    <-                                             --------->MYB46(3)       <---------ANAC58    -------->ATHB1                                           --------->MYB52(1)         <---------ANAC58   <---------YAB1               <-------TEIL         --------->YAB1                    <---------ANAC46   --------->ICU4        ----------->GT1  <---------YAB1--------->ZAT6              --------->GLK1(2)     <---------ATHB12 --------TOE1(3) --------->TOE2(3) <---------YAB1                 <---------GLK1(2)    --------->YAB1   gaaggttaagatgtaaatacattagttataagtgtttatgatcactaacagaccatttctgaagtatagattccgttttaagaggaaaataatcattggt  5087000                                                       <---------ARR11(3)           --------->ARR11(3)                                                 --------->ANAC55(2)      <----------DOF2                                                 <---------ANAC55(2)     <---------ANAC58                                      <---------AHL20(2)          --------->ATHB12  <---------ARR11(3) ---MYB46(3)                      --------->AHL20(2)   --------->ARR11(3)<---------ANAC58 --------TOE2(3)                  <---------AHL20(2)<-----------GT1     ---------->ID1             --   taagtttgttttgaaacttacatagattagaaacatttattttaaaaacttatgtaacatcttctacatgatttggcttttacaaagatttagtctaaaa  5087100  Previous    Next  AGI:  At4g08110.1    Description:  transposable element gene. CACTA-like transposase family (Ptta/En/Spm), has a 4.2e-66 P-value blast match to At5g29026.1/8-244 CACTA-like transposase family (Ptta/En/Spm) (CACTA-element) (Arabidopsis thaliana) Range:  from: 5083923    to: 5086637    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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