Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                  --------------------->WRI1                           <-----------GT1                        <---------AHL20(2)                       --------->AHL20(2)                     <---------AHL20(2)            ---------                       <---------AHL20(2)                  ------->TEIL               ------>ZmHOX2a(2)                      <---------WOX13(1)               <-------MYC3                  --------->GLK1(1)                   <---------YAB1               <----------DOF2 >>>>>>>>>ARR2<---------MYB46(3)  ----             <---------AtMYB61  <---------MYB52(1)     ------->MYC3      <---------YAB1  <----------DOF2   atgttttgactggttttggttttgatttatttctgtttgtgcttctcgctctttacacatgtatttgattgtattctgatggttctgatctctttaaaat  4972300                                        --------->AHL20(2)              <----------DOF2                                        <---------AHL20(2)          <---------ARR14(2)                                   <---------MYB59--------->ARR14(2)<---------GLK1(2)        <-------          --------->HSFB2a(2)      <---------DAG2------>ZmHOX2a(1)  --------->ARR14(2)     <---------YAB1 --------->GLK1(2)                 --------->TOE2(3)         <---------YAB1              --------->ANAC55(2) >AHL20(2)<---------HSFB2a(2)      --------->TOE1(3)     <---------MYB52(1)    <----------DOF2   <--- ----->YAB1 ---------->DOF2     <-----------GT1  <---------CCA1(2)<---------ZAT18  <-----------GT1 <-   aagaatcgagttccaaaagccttactgtgtttgtttaccttattaattctcctatcttcgtttattagtggattctttatacttttaactcacatgattc  4972400                                                                         <----------DOF2                                                                         <---------DAG2                                                                      <-----------GT1                                                                 --------->AHL20(2)                                                                 <---------AHL20(2)    ------>MYB83               --------->ANAC58                 <---------AHL20(1)    -------->P       <------MYB46(1)                            --------->AHL20(2)    ------>MYB46(1)  <------MYB83                               <---------AHL20(2)                <--  <---------MYB59   <---------AtMYB61       <---------AtLEC2 <---------AHL20(2)                   <-- --GLK1(2)         <--------P  --------->ANAC58              --------->AHL20(2)     --------->ANAC58 -------DOF2 ---------->DOF2   <---------MYB52(2)           <---------AHL20(2)      --------->ANAC58 ----------GT1   --------->ALFIN1      --------->ARR14(2)   --------->AHL20(2)      --------->ANAC46   tttaccaacttgtatgaaagtgttggtagtgccacgaacaggttttgcaagtctttgaactattaatttaattcactttttttatcaaggaactaagagt  4972500                                                                                  <---------WOX13(1)                                                                               <---------AHL20(2)                                                                               <---------YAB1                                                                             <----------DOF2                                                                             --------->TOE2(3)                                                                        <------MYB83                                                                       <---------------AtSPL3                                                                       <---------------AtSPL8                                                         ---------->DOF2<------MYB46(1)                                                -------->HAHB4         --------------->AtSPL8                                                --------->YAB1         --------->MYB59                                                --------->ATHB12     --------->CCA1(2)                    ==================HOX2a_HOX2a <---------YAB1     --------->ARR14(1)                    ------>ZmHOX2a(2)          <---------YAB1       --------->ARR11(3)        --------->YAB1   <-------TEIL          --------->ICU4       --------->ARR11(1)  --------->YAB1  <---------ARR11(3)           <---------ATHB12     --------->ARR14(2)              - -------YAB1  --------->YAB1   ------>ZmHOX2a(1)<---------ICU4      <---------ARR14(2)         <----- -------AHL20(2)  --------->ARR11(3)          <---------TOE2(3)   ----------->ARR10           -------   tttattgtaatcagaaacatgatctggttcatcctcttatttgtttctaatgattagagcaaagaacaaagatttggtactttaattgaaaaactataaa  4972600                                                                               ------>NtERF2                          <---------MYB52(1)                                   <-----------HVH21                          <------NtERF2                                        <-----------TGA1                         ------>NtERF2                                        --------->bZIP60(1)                         <-----------TGA1                                 <--------P                         <---------RAP2.6(3)                             <-------GAMYB      <---------------AGL15                                             <---------MYB46(3)      -----      --------------->AGL15             <------MYB46(1)       --------->AHL20(2)<------NtERF2<-------     <-----------------AGL1             ----------->GT1      --------->AHL20(2)<---------RAP2.6(3)     <-----------------AGL2     ------->TEIL       <---------YAB1       <------MYB83         -------- -------->ATHB12         <-----------HVH21       --------->YAB1         <------MYB46(1)    <---------HSFB2a(2) ----AHL20(2)           --------->bZIP60(1)     <---------YAB1<---------AHL20(2)<---------MYB52(1) -->AHL20(2)      <-----------RAV1(1)   <------MYB83     ---------->ID1<---------AtMYB61   --------->HSFB2a(2)   attgattactccatttggacttgttgccgtcatggacttgttgggttactatcatttttgtcatttatttgggctggttgccgtcatgggcttctagcaa  4972700                                                                                ------->MYC4                                                                                <-------PIF5                                                                                ------->MYC3                                                                                <-------MYC2                                                                                ------->MYC2                                                                                ------->PIF5                                                                                <-------MYC3                                                                                <-------MYC4                                                                               --------->TGA1a                                                                   ======================bZIP_DOF      --------->AHL20(2)                                       --------->At4g35610      <---------AHL20(2)                                       <------NtERF2   --------->O2     <---------AHL20(2)                                       --------->ANAC58 <---------O2     --------->AHL20(2)            ------->TEIL               --------->ANAC46 <---------TGA1a     <---------AHL20(1)            *TSS                       --------->ANAC58 --------->ANAC55(2)     --------->AHL20(1) ----------->GT1----------->GT1       --------->ZAT18 <------------OsbHLH66 ------>GT1   ------------>CBF  <---------ATHB12        <---------At4g35610  <---------ALFIN1 --STY1(2) <-----------GT1   --------->ICU4             --------->At4g35610 <---------REM1(2) ->STY1(2)--------->AHL20(2)------------>CBF     --------->ARR11(3)---------->DOF2    <-----------GT1   gtgaaaatttaattaactcaatagattagtaacaatgaattttgtaacaaataacttgagatgcccgctaaaaggctctccacgtgtttttcattctgaa  4972800                                                    --------->YAB1                                                    <---------ICU4                                                    <--------HAHB4                                  <                                                    --------->ATHB12                              <--                                                   <---------YAB1                                ----                                                   <---------ATHB12                             -----            <---------ANAC46               --------->At5g28300                                  <----            <---------ANAC58              ----------->GT1     <-----------GT1                  ------            <---------ANAC58       --------->DAG2  --------->ICU4                              <-----          <---------At5g28300     ---------->DOF2--------->YAB1  <---------ALFIN1  <---------At4g35610        <---------SPL7        <----------ID1    <---------AHL20(2)          <-------TEIL       <-----   gttgcctcgtcttaccgtggtcatttcattatgcgaaaaagtcatggtaaataatcattacatttacccacatttcgattcatttatctgatagcaaatt  4972900            <---------AHL20(2)           --------->AHL20(2)       --------->AHL20(2)       <---------AHL20(2)  <---------AHL20(2) --------->AHL20(2)                                                  --------->YAB1 ---------AHL20(2)                                                  <------ZmHOX2a(2) -------YAB1--------->AHL20(2)                 <------ZmHOX2a(1)   --------->ARR11(3) ----->AHL20(1)                                ============================HOX2a_HOX2a ---->AHL20(2)                       <---------ANAC58      --------->MYB52(1) -----AHL20(2)                       <---------ANAC58======================HOX2a_HOX2a            <-- --->AHL20(2)                        --------->ANAC46<------ZmHOX2a(1)                           <--- ----AHL20(2)                        --------->ANAC55(2)  ---------->DOF2<----------DOF2         <--- ----AHL20(1)                  --------->AHL20(2)   ----------->GT1<---------ARR11(3)   --------->TOE2(3)   attttaaatttaaattaatcttggatgcctcattaatatgcgtaatagaggaagaggaaacaaagggacgatcatctttttttttgtaaaccctagtttg  4973000                                                                        --------->ANAC46                                                                    <-----------GT1                                                             --------->LBD16                                                            --------->ATERF1(2)                                                          --------->MYB52(1)                                                         --------->DEAR3(1)                 <--------                                                         <---------ALFIN1                 ------>ZmHOX2a(1) --------DOF2                                            --------->AtMYB61            --------->ARR14(2) ------ANAC58    <---------DAG2              <---------ICU4 --------->DEAR3(1)        <---------ARR14(2) ------ANAC58    <----------DOF2 <-----------HVH21      --------->MYB46(3)           --------->GLK1(1)   ctttcactggctactctaacttttctcttctcttgtgtcatttctcaatattgctctcaccaccggcgatttactcgcctctctcacaaatcctccatct  4973100                                                          --------->SPL7                                                          ------->TEIL                                                          <---------ARR14(2)                                                          --------->ARR14(2)                                                        <---------SPL7                                                       --------->DEAR3(1)          ------>ZmHOX2a(2)                                                      --------------->AtSPL8      <------ZmHOX2a(2)                                          --------->HSFB2a(2)                    <---------ARR11(3)                               ------>NtERF2        <---------ALFIN1             --------->ARR14(2)                              --------->DEAR3(1)   --------->MYB46(3)            --------->ARR11(3)                              ----------->HVH21 ----------->HVH21                <---------ARR14(2)                <---------GLK1(2)         <---------HSFB2a(2)                <-----------GT1 -ALFIN1     --------->YAB1   --------->ANAC46 --------->DEAR3(2)      ----------->GT1        <------   ctaaccttgtcttgatcatattctttccatctccgacgctctctctcgaactgaccaccgtaccctctcaatccagtttaaacgatctgtctctctcgtc  4973200  Previous    Next  AGI:  At4g08090.1    Description:  transposable element gene. CACTA-like transposase family (Ptta/En/Spm), has a 1.4e-12 P-value blast match to At1g15560.1/58-302 CACTA-like transposase family (Ptta/En/Spm) (CACTA-element) (Arabidopsis thaliana) Range:  from: 4972735    to: 4975932    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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