Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                           --------->ATHB12                                                                     --------->ALFIN1                                                                    <-------PIF5                                                                    <-------MYC2                                                                    ------->MYC3                                                                    <-------MYC3                                                                    ------->MYC2                                                                    ------->PIF5                                                                    ------->MYC4                                                                    <-------MYC4                                                                   <---------O2                                                                   --------->TGA1a                                                                   --------->PIF3(3)                x                                                                   <---------PIF3(3)                x                                                                   <---------TGA1a               xxxx                                            =================================bZIP_DOF          xxxxxx                                     xxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)<---------YAB1         <xxxxx                                <---------ARR11(3)                 --------->O2              <xxxxxxx                      <xxxxxxxxxxxxxxxxsmallRNA(i)               <---------ALFIN1           ---------               <---------ARR14(2)  ==========================================bZIP_DOF      --------->ARR14(2)               --------->ARR14(2)  <----------DOF2          <---------ICU4                 <---------GLK1(2)             <xxxxxxxxxxxxxxxxsmallRNA(s)   ---------->DOF2 --------->YAB1               ----------->ARR10          <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)             <---------ATHB12<---------WOX13(1)xxxxxxxx  xxxxxxxxxxxxxxxx>smallRNA(i)  --------->ARR11(3)         --------->ICU4<---------MYB46(3)<---------ARR14(2) >DOF2  xxxxxxxxxxxxxxxx>smallRNA(s) <---------YAB1 --------------------->WRI1       ----------->HVH21   catttctgagtcttgcagttctggcattggagaagaactttgatagaaaagccttcttgtaatcatcccacgtggtgattgagtcatgggacagattctt  4901200                   <------NtERF2                  ------>NtERF2                ---------->ID1               <-----------HVH21              <-----------RAV1(1)            <----------DOF2       xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)       <---------ANAC58       <---------ANAC58      xxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)      xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)      xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)     xxxxxxxxxxxxxxxx>smallRNA(i)    xxxxxxxxxxxxxxxx>smallRNA(i)    xxxxxxxxxxxxxxxx>smallRNA(s)   xxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)   xxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)   xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)  xxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)              --------->ARR14(2) <-----------RAV1(2)                              <---------ARR14(2)              >>>>>>>GRF7 --------->HSFB2a(2)     --------->YAB1          <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3) <---------HSFB2a(2)     xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)   --------->bZIP60(1)     <xxxxxxxxxxx xxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)             <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)  xxxxxxxxxxxxx =========================RAV               --------->ZAT2    ----------->HVH21<-----------HVH21 xxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)       <---------ZAT2    <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3) xxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)   --------->ANAC46    <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3) xxxxxxxxxxxxxxxxx>smallRNA(s2)     --------->MYB46(3)    <---------ZAT14   <----------DOF2 xxxxxxxxxxxxxxxx>smallRNA(si3)     <---------MYB52(2)    --------->ZAT14--------->ARR11(3) xxxxxxxxxxxsmallRNA(s) <xxxxxxxxxxxxxxxxsmallRNA(s) <xxxxxxxxxxxxxxxxsmallRNA(i)<-----------RAV1(2) xxxxxxxxxxxxxxxxsmallRNA(si3)    xxxxxxxxxxxxxxxxxxx>smallRNA(si3)      <---------ARR11(3) >GLK1(2)<xxxxxxxxxxxxxxxxsmallRNA(s) --------->MYB52(1)  <---------REM1(2)------>ZmHOX2a(2) xxxxxxxxxxxxxxx>smallRNA(si3) ----------->GT1<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)  <--------P   ctcccagatgtgtgctttgtcgcccaaggagaatggaaacaaacggagcttgaatccgtcttcactgacaccattgatctttgtcaggttgcagagccta  4901300                           ------>ZmHOX2a(1)                         ------>ZmHOX2a(2)                         xxxxxxxxxxxxxxxx>smallRNA(i)                        <------ZmHOX2a(2)                       <---------ARR14(2)                       --------->ARR14(2)                       <---------ARR11(3)                       --------->ARR11(3)                     ----------->ARR10                    xxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                    --------->ALFIN1  <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                  <xxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                  <---------ANAC46    <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)             <---------MYB46(3)     <xxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                       <------            --------->ALFIN1       xxxxxxxxxxxxxxxx>smallRNA(s)                        <---------HSFB2a(2)            <---------AtMYB61--------->ATHB12      ---------->ID1                      --------->HSFB2a(2) xxxxxxxxsmallRNA(se3) <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                        xxxxxxxxxxxxxxxxx xxx>smallRNA(s) <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)        --------->YAB1      xxxxxxxxxxxxxxxxxxx   tcgaattcatctaggtggtcgagtggatcctccattggcagaccatggaatttgttcccttgaatcatcgagatgagaccgctcttaatctcgaagttgt  4901400                                              --------->ALFIN1                                             ------->PIF5                                             <-------MYC2                                             ------->MYC3                                             <-------PIF5                                             ------->MYC2                                             <-------MYC3                                            --------->O2                                            <---------bZIP60(2)                                            <---------TGA1a                                            --------->TGA1a                                            <---------O2                                            <---------ANAC46                                            <---------ANAC55(2)                                       xxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                                       xxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                                       xxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                                      xxxxxxxxxxxxxxxx>smallRNA(s)                                      <xxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                                     --------->At5g28300                                ----------->HVH21      <xxxxxxxxxxxxxxxxxxxxsmallRNA(i2)                         =============================bZIP_DOF                         <----------DOF2    --------->ANAC55(2)               xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3) <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)             --------->ALFIN1   ----------->TGA1     xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)         <-----------RAV1(2)  ------>ZmHOX2a(1)      --------->At4g35610       xxxxxxxxxxxxxxxx>smallRNA(s) <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)     xxxxxxxxxxxxxxxx>smallRNA(s)  <---------DEAR3(1)<---------At4g35610    xxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)  <---------HSFB2a(2)   <---------ANAC58  xxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)  xxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)  --------->HSFB2a(2)   <---------ANAC58  xxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)xxxxxxxxxxxxxxxx>smallRNA(i) <---------LBD16       xxxxxxxxxxxxxxxxxxxxxx>smallRNA(s2)                <------NtERF2 ---MYB46(3)<------ZmHOX2a(1) --------->At4g35610   ------->TEIL  <xxxxxxxxxxxxxxxxsmallRNA(i) xxxxxx>smallRNA(si3) xxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)          <-----------RAV1(1) xx>smallRNA(i2) <-------TEIL <---------At4g35610 <-------TEIL   <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)   tgttctggatagcaggaggtgcaattcctttcctctgacggtgatcacgtggtgcatctccagcaccaatgttggcagggccattttgttgattctgttc  4901500                     <---------TOE2(3)                   xxxxxxxxxxxxxxxx>smallRNA(s)                  <---------ANAC46                 --------->At4g35610                 <---------At4g35610                <---------MYB46(3)                                                                  <                xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                                            ----               <--------P <---------TOE2(1)                                                      ----               xxxxxxxxxxxxxxxx>smallRNA(s)                                                      <---             <---------MYB46(3)                                                                <-----             --------->MYB55(2)  <---------WRKY18(1)                                           ------            <---------AtMYB61   --------->WRKY12                                               ------            --------->ALFIN1    --------->WRKY38(1)               --------->CCA1(2)        <xxxxxxxxx          xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)              <---------ANAC58              xxxxxxxxxx          <xxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)  <----------DOF2  <---------ZAT2            xxxxxxxxxxx        <---------ANAC58  <---------TOE1(1)<-----------GT1   <---------ANAC58            ---------->DOF2        <---------ANAC58 <-------TEIL    <xxxxxxxxxxxxxxxxsmallRNA(fl3)   <---------MYB46(3)   <-----   ttcagccatttcgagtggttgctgaggtacaaggttgactgtgtttctcctttctctgagtttgcgagctatgcggtcgatgtttttgttgaaaaggagg  4901600         <-------GAMYB       xxxxxxxxxxxxxxxxxxxx>smallRNA(si3)      <---------ANAC58      <---------ANAC46      <---------ANAC58   <---------WOX13(1)  xxxxxxxxxxxxxxxx>smallRNA(i) --------->ATHB12                             <------ZmHOX2a(2) ---------YAB1                           <---------LBD16 ----->ARR14(2)                          xxxxxxxxxxxxxxxxxxxxx>smallRNA(se3) ----->GLK1(2)                          ----------->RAV1(2) ------ARR14(2)                        ------->TEIL          xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3) ----HSFC1(2)                       --------->ALFIN1        --------->ANAC58 --->HSFC1(2)                       <---------REM1(1)  <----------ID1 --->HSFB2a(1)                     xxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                 ----------->GT1 xxxxxxxsmallRNA(s)          *TSS  xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)          ------->GAMYB xxxxxxxxxx>smallRNA(se3)   xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)         <---------MYB52(1)<-------- xxxxxxxxxxxx>smallRNA(se3) xxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)     --------->ANAC46---------->DOF2 ----HSFB2a(1) ------>ZmHOX2a(2)<xxxxxxxxxxxxxxxxsmallRNA(s)--------->ANAC58   --------->MYB52(1) ---   ttctgattgcctgttgatcgagttcgcatacagtagaggtgtacctggatcaagaagacaacaagaaaaacacacagttagtaaccgaaaagaaaattga  4901700                                                                        --------->YAB1                                                               --------->DEAR3(1)                                                              --------->RAP2.3(1)                                                             ------->GAMYB                                                             <---------RAP2.3(1)                                                             <---------ATERF1(1)                                                            <---------DEAR3(1)                                                       <xxxxxxxxxxxxxxxxsmallRNA(s)                                                 <xxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                                                --------->ANAC58       <---------AHL20(2)                                                --------->ANAC58 <------NtERF2                                                <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                                       <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                                      --------->MYB46(3)    <xxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                      <---------MYB52(2)  --------->MYB52(1)                                      <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                                     <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)  --------->YAB1                 <xxxxxxxxxxxxxxxxsmallRNA(i)  <xxxxxxxxxxxxxxxxxxxsmallRNA(le3)                <xxxxxxxxxxxxxxxxsmallRNA(i) <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)             --------->ANAC46        <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)  -------->HAHB4             --------->ANAC58        <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3) <---------YAB1          ------>ZmHOX2a(2)      ----------->GT1--------->ANAC46------>NtERF2                --------  --------->ARR11(3)    --------->GLK1(1)  <xxxxxxxxxxxxxxxxsmallRNA(i)--------->AHL20(2)    --------  <---------ARR11(3)    <---------GLK1(1)xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)            --------->WOX13(1) ----CBF<---------ARR11(3) --------->TOE2(3) xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)  <---------YAB1  - ------->DOF2--------->ANAC58  <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)  --------->AHL20(2) <---------AHL20(2)   aaaagagcttgatctaagcaagtctgaaatctcaaatgtaacaaacaaacacccaattggcaacggcgccaaattaataataggtttttattcaattaaa  4901800                                                     xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                                                     xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)                                                   xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                                                   xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)                                                   --------->ALFIN1                                                  xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                                                  xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)                                               <---------ANAC58                                               <---------ANAC58                                               xxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                                               xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                                               xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                                              xxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                                             xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                                             xxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                                             xxxxxxxxxxxxxxxxxxxx>smallRNA(se3)                                            xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                                           xxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                                      <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                      xxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                        xxx                                     --------->WOX13(1)                                           xxx                                   xxxxxxxxxxxxxxxx>smallRNA(i) --------->YAB1                    <--                                  xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)                           <xxx                                 xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                            ----                                 xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                           ----                               xxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)   <---------ARR11(3)           ----                       xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3) --------->WOX13(1)                  ----                      xxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)  --------->MYB46(3)                  xxxxx                   xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)   <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)<xxxx                 xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)   xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3) <xxxxx          --------->YAB1  xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)<---------ATHB12                xxxxxx    <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3) xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)               <xxxxxx   <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)  xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)                 xxxxxxx   <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3) xxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                ---------  <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3) xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)             --------->WRKY18(1) ->AHL20(2)      xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)  --------- ->YAB1 <xxxxxxxxxxxxxxxxxxxxsmallRNA(se3)xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)         <xxxxxxxxxxxx --------->DOF2 <-------GAMYB<---------TOE1(3)xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)     <xxxxxxxxxxxx   actaaagcactatcatgtcgttgtagtactgaaggttgtcaatccaaatgggtgtgatgctaacaatcaagatgtgatcagaagttactaagtcaagcca  4901900            <---------AtMYB61       xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)       xxxxxxxxxxxxxxxx>smallRNA(i)      xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                                                         x     xxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                                                        xxxx     xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                                             ------>MYB83  x     xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)                                            ------>MYB46(1)   xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)                                             <xxxxxxxxxxxxxxx   <xxxxxxxxxxxxxxxxsmallRNA(i)                                                      ----------->RAV1(1) <xxxxxxxxxxxxxxxxsmallRNA(i)                                                      --------->MYB46(3) xxxxxxxxxxxxx>smallRNA(i)                                                        <xxxxxxxxxxxxxxxxxx xxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                                               xxxxxxxxxxxxxxxx>smallRNA(s) -------ATHB12        <---------HSFB2a(2)                                         <xxxxxxxxxxxxxxxxxx xxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                                               <xxxxxxxxxxxxxxxxsmallRNA(s) ----->AtLEC2  <---------ANAC58                                                  xxxxxxxxxxxxxxxx>smallRNA(s) ----->ANAC58  <---------ANAC46                                               <<<<<<<<<TAC1<---------At4g35610 ----->ANAC46  <---------ANAC58                                            <xxxxxxxxxxxxxxxxxxxsmallRNA(si3) ----->ANAC58 xxxxxxxxxxxxxxxx>smallRNA(i)                                 <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3) xxxxxxxxxxxxxxxxxx>smallRNA(se3)                                        <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3) xxxxxxxxxxxxxxxxxxxsmallRNA(se3)                                       ---------->DOF2<---------ALFIN1 xxxxxxxxxxxsmallRNA(i)                                                <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3) xxxxxxxxxx>smallRNA(s)   --------->WOX13(1)                           <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(s2) xxxxxxxxxxsmallRNA(i)>>>>>>>ZML2                                     <xxxxxxxxxxxxxxxxxxxxxsmallRNA(le3) xxxxxxxxxxxxxx>smallRNA(se3)                      ----------->GT1    --------->At5g28300 <xxxxxxxxxx >ANAC58 xxxxxxxxxxxxxxxx>smallRNA(s)            --------->At4g35610 ----------->GT1--------->AtMYB61 >ANAC58xxxxxxxxxxxxxxxx>smallRNA(s)          ---------->DOF2      <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3) xxxxsmallRNA(s)      --------->HSFB2a(2)--------->AtLEC2 <---------AHL20(2)  --------->ANAC46 <----- xxxxsmallRNA(i)   xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)  --------->AHL20(2)xxxxxxxxxxxxxxxx>smallRNA(s)   agcaataacaggttttggtgtgttctagcaatcccaagtgaacatgcagaaagcagaaaattaaacagaaacagtaaaacactcgaccaacacagctctt  4902000                                                                                             --------                                                                                           <xxxxxxxxx                                                                                          xxxxxxxxxxx                                                                                          xxxxxxxxxxx                                                                                         <xxxxxxxxxxx                                                                                         xxxxxxxxxxxx                                                                                        <xxxxxxxxxxxx                                                                                        xxxxxxxxxxxxx                                                                                       xxxxxxxxxxxxxx                                                                                       xxxxxxxxxxxxxx                                                                                       <---------ZAT2                                                                                      <xxxxxxxxxxxxxx                                                                                     <xxxxxxxxxxxxxxx                                                                                    xxxxxxxxxxxxxxxxx                                                                                    xxxxxxxxxxxxxxxxx                                                                                   <xxxxxxxxxxxxxxxxx                                                                                 xxxxxxxxxxxxxxxxxxxx                                                                                 <xxxxxxxxxxxxxxxxxxx                                                                                 xxxxxxxxxxxxxxxxxxxx                                                                                 <xxxxxxxxxxxxxxxxxxx                                                                                 xxxxxxxxxxxxxxxxxxxx                                                                                xxxxxxxxxxxxxxxxxxxxx                                                                               xxxxxxxxxxxxxxxxxxxxxx                                                                              xxxxxxxxxxxxxxxxxxxxxxx                                                                             xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                                                                             <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                                                            <-------GAMYBxxxxxxxxxxxx                                                                       <xxxxxxxxxxxxxxxxsmallRNA(i)                                                                       <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                                                      <xxxxxxxxxxxxxxxxsmallRNA(s)                                                                      xxxxxxxxxxxxxxxx>smallRNA(i)                                                                      xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                                                                      <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                                                      xxxxxxxxxxxxxxxx>smallRNA(s)                                                                     --------->ZAT14xxxxxxxxxxxxxxxxx                                                                     <xxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                                                     <xxxxxxxxxxxxxxxxsmallRNA(s)                                                                     <xxxxxxxxxxxxxxxxsmallRNA(i)                                                                    <xxxxxxxxxxxxxxxxsmallRNA(i)                                                                    <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                                                                   <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                                                   xxxxxxxxxxxxxxxxxxx>smallRNA(si3)                                                                   <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                                                                   --------->ZAT18 <xxxxxxxxxxxxxxxxx                                                                   <---------ZAT14xxxxxxxxxxxxxxxxxxx                                                                   --------->ZAT14xxxxxxxxxxxxxxxxxxx                                                                  xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                                                                  xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)                                                                  xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)                                                                  <xxxxxxxxxxxxxxxxsmallRNA(i)                                                                  xxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                                                                  xxxxxxxxxxxxxxxx>smallRNA(i)<------             <---------AtMYB61                                    xxxxxxxxxxxxxxxx>smallRNA(s)<------MYB83           xxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                  xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)          xxxxxxxxxxxxxxxx>smallRNA(i)                           xxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)          <xxxxxxxxxxxxxxxxsmallRNA(i)                           xxxxxxxxxxxxxxxxxxx>smallRNA(fl3)       xxxxxxxxxxxxxxxx>smallRNA(i)                             xxxxxxxxxxxxxxxx>smallRNA(i)xxxxxxxxx      xxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                       xxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)    xxxxxxxxxxxxxxxx>smallRNA(i)                                <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)   <---------ZAT18                                              <xxxxxxxxxxxxxxxxsmallRNA(s)<xxxxxxxx   <---------ZAT14                   ------->GAMYB             xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)   --------->ZAT14                   xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)  <---------At4g35610   --------->ZAT18               <xxxxxxxxxxxxxxxxsmallRNA(i) xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)  xxxxxxxxxxxxxxxx>smallRNA(s)  <xxxxxxxxxxxxxxxxsmallRNA(s)  <xxxxxxxxxxxxxxxxsmallRNA(s)<xxxxxxxxxx xxxxxxxxxxxxxxx>smallRNA(s)   <xxxxxxxxxxxxxxxxsmallRNA(s)   xxxxxxxxxxxxxxxx>smallRNA(s)<xxxxxxxxxx xxxxxxxxxxxxxxxxxxx>smallRNA(si3)--------->MYB52(1)     <---------GLK1(2)  --------->At4g35610     < xxxxxxxxxxxxxxx>smallRNA(i)  <xxxxxxxxxxxxxxxxsmallRNA(i)   xxxxxxxxxxxxxxxx>smallRNA(i)<xxxxxxxxxxx xxxxxsmallRNA(fl3)    ---------->DOF2          --------->AHL20(2)xxxxxxxxxxxxxxxxxxxxx>smallRNA(se3) xxxxxsmallRNA(fl3)  ----------->HVH21   ----------->GT1 <---------ARR14(2)<---------MYB46(3)<------- xxxxsmallRNA(si3) <---------ANAC46 --------->MYB46(3) ----------->ARR10   <-----------RAV1(1)<------MYB46(1) xxxxxxxxxxxxxsmallRNA(fl3)  <xxxxxxxxxxxxxxxxsmallRNA(s)<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)<xxxxxx -----DOF2<-----------HVH21  <xxxxxxxxxxxxxxxxsmallRNA(i)--------->ARR14(2)xxxxxxxxxxxxxxxx>smallRNA(i)   tgcagagcactgggtgaggtcgagtgaaaggtcgagtaacagacagaaaataaaacacagatactcgactgcacagtctgttgccagacaactgggtggt  4902100  Previous    Next  AGI:  At4g08050.1    Description:  transposable element gene. gypsy-like retrotransposon family (Athila), has a 0. P-value blast match to GB:CAA57397 Athila ORF 1 (Arabidopsis thaliana) Range:  from: 4895656    to: 4901629    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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