Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                   --------->AHL20(2)           --------->YAB1                                                               --------->AHL20(2)    --------->ZAT14               --------->ARR14(2)                                   --------->AHL20(2)    <---------ZAT14               <---------ARR14(2)   --------->ARR14(2)              <---------AHL20(2)    <---------ZAT18 ---------->DOF2   <------ZmHOX2a(1)<---------ARR14(2)     <---------ICU4--------- -->ZmHOX2a(1) --------->YAB1 <-------TEIL      <-------TEIL ---------->DOF2 --------->AHL20(2)<-----   ttgctgtccactatcaaaaataaaaaggaacatacagataggataacaaatacatcggaaactcaaaggaaatgagagaataaatacaaataaataatac  4886700                                                      ----------->GT1                                                  --------->TOE1(2)          <---------AHL20(2)                                                  --------->TOE2(2)--------->YAB1                                                 --------->YAB1   <---------YAB1                   --                         ----------->GT1        <---------YAB1   --------->AHL20(2)              <---                        --------->ANAC58      --------->YAB1     --------->AHL20(1)       --------->DAG2     ----------->GT1    --------->ANAC58   <---------ICU4--------->AHL20(2) --------->AHL20(2)   <--- >YAB1            --------->AHL20(2)   --------->HSFB2a(2)     --------->AHL20(1)        ---------->DOF2 ----ICU4         <---------AHL20(2)   <---------HSFB2a(2)     <---------AHL20(1)----------->GT1-----   ttccaaattgtaaactctaatttaacaaggaaaaacattttctaaaaattatcatacgattaaaaaatattataagcattaaatagaaaaaaaaagtgta  4886800                  --------->YAB1                  --------->ATHB51       --------->ALFIN1   --------->AHL20(2)     --------->ALFIN1    <---------AHL20(2)   <---------ANAC58   <---------AHL20(2)   <---------ANAC58  <---------AHL20(2)                                                            --  <---------MYB46(3) --------->AHL20(2)--------->ALFIN1                                          <--- --------->ALFIN1 <--------HAHB4     --------->ALFIN1                                     --------->YAB1 ------->ALFIN1   <---------ICU4   <---------ANAC58                          --------->ZAT6    ------ ------ANAC58    --------->ICU4   ------->TEIL                            <----------DOF2 <---------ICU4 ------ANAC58    --------->AHL20(2)<---------ANAC58                --------->DEAR3(1)    <---------ATHB12 -->TEIL  <---------PCF2 --------->AHL20(2)                     <---------ALFIN1         --------->ICU4   cgtgtgggtgtgggtcagaataattaaataattttgtacgtgtgggttttttagtcaaaagaatcaacaccgtctactttcactatagctaataatgtcg  4886900                             --------->At4g35610                          <---------MYB52(1)                       ------>MYB83                       ------>MYB46(1)                     --------->DEAR3(1)                    --------->At4g35610                 <------ZmHOX2a(2)           --------->ARR11(3)                 =========================HOX2a_HOX2a          ------>ZmHOX2a(1)  <---------At4g35610  <-----------GT1        ------>ZmHOX2a(1) ---------->CBF --------->ARR11(3)           <---------AHL20(1)         --------->TOE2(3)           - ---NtERF2==============HOX2a_HOX2a       --------->AHL20(2)     <----------DOF2       <---------GLK1(2) --->ETT(1)     <---------ARR11(3) ------>ZmHOX2a(1)         <----------DOF2     <---------ZAT18-----   ggacaatgtctcctaatagatcacctcccttagcttcctctacattatatattcaccattcttctttctttgttcctcaacagggctcacattctctatc  4887000                                                                          <------------CBF                                                             <----------DOF2                                                       <---------------AtSPL8                                                       <---------------AtSPL3                                           <---------At4g35610            --------->YAB1                               <---------ARR11(3)      --------------->AtSPL3                              <---------CCA1(2) ---------->DOF2   <---------ANAC58      <----------DOF2       ----------->TBP--------->At4g35610    <---------ANAC58 -------->AtMYB61<----------DOF2   <------------CBF    --------------->AtSPL8                    ---- ---->MYB46(3)   <---------DAG2--------->ARR11(3)     ---------->DOF2  <----------DOF2           <---   caccaaaacttttcttctacttttctatctatatatctattgttgagctacaaagtgaaagtacttttacttgctatattgatcaccaagttatagcatt  4887100                             ------>NtERF2                           <------NtERF2              --------->AtLEC2                                                                -------              --------->ANAC58                                        --------->ANAC58        -------              --------->ANAC58                                 <---------AtLEC2     --------->ARR14(2)             --------->WOX13(1)                            <---------ANAC46         <---------ARR14(2)  --------->AHL20(2)  --------->MYB111(2)            ------>ZmHOX2a(1)--------->ANAC58  ------>ZmHOX2a(1) ----->AHL20(2)       <---------MYB46(3)   --------->ANAC58<---------ANAC58         --------->GLK1(2) ------AHL20(2)  ---------->DOF2           --------->ANAC58<---------ANAC58  <---------HSFB2a(2)   --   taaaaaaaatgttgtcaagcaaagttgttggcgactctcatggacaagactcatcctacttccttggatggcaagaatacgagaagaatcctttccacga  4887200    <-----------GT1            <---------ANAC58                             <-----------GT1 -->O2--------->ZAT6           <---------ANAC58             ------->TEIL   <-----------GT1 -->ANAC46        ----------->GT1                        <---------ATHB12 <---------AHL20(2)       <- --------->GT1   <---------KAN4(2)                     --------->WOX13(1)--------->YAB1            --   gtcgtttaacactagtgggattgttcaaatgggtcttgctgaaaaccaggtttgtatcaatgaatctactaactattttaactcatagagaacaaaacta  4887300                                                                     ------>MYB46(1)                                                                     ------>MYB83                                                                   <---------------AGL15                                           <---------MYB52(1)      <---------MYB59                                         <---------ANAC58          --------------->AGL15                                         <---------ANAC58         ----------------->AG                                      <-----------GT1             ----------------->AGL2                                <---------MYB46(3)                ----------------->AGL1        -----                                --------->MYB111(2)         <----------DOF2                    <-----    --------->ANAC46            --------->MYB52(2)      <----------DOF2                        ------   --------->ZAT18<----------DOF2<-------GAMYB<----------DOF2   <-----------GT1   <---------ANAC46 --------------AtSPL8           --------->MYB55(2)    <---------At4g35610         <---------ANAC58 ------------->AtSPL8        <---------MYB46(3)       --------->At4g35610         <---------ANAC58   gtatgtacacaatttccaaacttttgtttatcggttgttgtttccgttctttttgcagctttcttttgacctaatagagaaatggcttgaagagcatcca  4887400                                                                                  <---------TOE2(3)                                                                           <---------ZAT2                                <---------MYB46(3)                         --------->ZAT2                             <------MYB83                                  --------->At4g35610                             <------MYB46(1)                               <---------At4g35610                            <---------DEAR3(1)                            ------>NtERF2     <---------TOE1(2) <---------YAB1                               <---------ANAC58            ----- ---->LBD16          --------->YAB1                                 <---------ANAC58      --------->ANAC58 ----HSFB2a(2)      --------->ICU4                                  <---------ANAC46      --------->ANAC58 --->HSFB2a(2)XXXXXXXXXXXXXXXXXXXX>MIR3933                    <---------YAB1 <----------DOF2  >>>>>>>   gaagtcttgggtttgaagaaaaatgatgagtcggtgtttagacaattagctctgttccaagattaccatggcttgccagctttcaaggatgtaagtaaca  4887500                                                                                                    -                                                                                                  <--                                                                                                  <--                                                                                             <-------                                        <---------LBD16                                      --------                                       <---------DOF5.7(2)                                  <--------                                       --------->MYB52(1)                                   ---------                                     --------->DOF5.7(2)                                    <--------                                    <----------DOF2                                         ---------                                    --------->TOE1(3)                                   ----------->GT1      ----------->GT1               --------->TOE2(3)                                  <------ZmHOX2a(2)      <---------ZAT6              <-----------------AGL1                              --------->ARR11(3) ---->ARR11(3)            --------->ZAT14 ------->GAMYB                               <---------ARR11(3) >>MYB98       ---------->DOF2   <-----------GT1   <---------AHL20(2)             ---------->DOF2 <--   tattgggagtgtttaaacaaagtttcagtttagtttaactttaacggaaacaaataatcgatagggttttgatatttcgaattcaaaagatcgaaaattc  4887600  Previous    Next  AGI:  At4g08040.1    Description:  ACS11 (1-Amino-cyclopropane-1-carboxylate synthase 11); 1-aminocyclopropane-1-carboxylate synthase. Identical to 1-aminocyclopropane-1-carboxylate synthase 11 (ACS11) [Arabidopsis Thaliana] (GB:Q9S9U6); similar to ACS8 (1-Amino-cyclopropane-1-carboxylate synthase 8) [Arabidopsis thaliana] (TAIR:AT4G37770.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN74730.1); similar to 1-aminocyclopropane-1-carboxylate synthase [Malus x domestica] (GB:BAA35057.1); similar to 1-aminocyclopropane-1-carboxylate synthase (ACC synthase) (S-adenosyl-L-methionine methylthioadenosine-lyase) (GB:P37821); contains InterPro domain Aminotransferases, clas Range:  from: 4887109    to: 4888936    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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