Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100    --------->ZAT14  --------->ZAT18  <---------ZAT18                                                                                <---  <---------ZAT14                                                             <---------WRKY18(1)---- ---------RAV1(1)         <---------ANAC46                                   --------->WRKY12    ---- ------>RAV1(2)           <---------ANAC58                                   ----------->HVH21   <--- ->TEIL       ------>MYB46(1)                                 ------>ZmHOX2a(1) ----------->RAV1(2) >ANAC55(2)   ------>MYB83<---------ANAC58             <-----------GT1     <---------ANAC58     ----- -ANAC55(2)  ----------->RAV1(1)            ------->TEIL  --------->AtMYB61<---------ANAC58   -------   ctggtgcagtagtaccaacatcaagttggcttgttccaaactcatgtactctagaatacacctcctctcgattttttccttgacctgaaacacatgaatt  4466700 ------YAB1 ----------->GT1 ----->AHL20(2)                  --------->TOE2(3)                                          <-------- ----->AHL20(1)      --------->ANAC58  <---------------AGL15          --------->YAB1        --------- ------AHL20(2)      --------->ANAC58  --------->AHL20(2)             --------->ANAC55(2) <---------KAN4(2) ---->AHL20(2)       --------->ANAC46  <---------AHL20(2)---------->DOF2  --------->GLK1(2) --------- >TEIL    ---------->DOF2--------->MYB52(1)       ---------->DOF2    <-------TEIL         ---------->TaMYB80   ttattgtttctgaaaagtcaaacacacaaacgaattcttaaatatttatgggaaaagaataaagtctaacatacataatctattgttctcagaatatact  4466800                                                                               -------->HAHB4                                                                               --------->YAB1                                                                               <---------ICU4                                                                              <---------YAB1         <---------CCA1(2)                                                    --------->ICU4       --------->YAB1                                                       --------->YAB1    <---------At4g35610                                              <---------At4g35610      <------    --------->At4g35610                                    <----------DOF2  <---------ICU4    <------ -ARR14(2)                                            <---------At4g35610  --------->ICU4    <------- >ARR14(2)                                         <------ZmHOX2a(1) --------->At4g35610 <---------ARR11(3) >ARR11(3)        ---------->DOF2            ---------->DOF2       <-----------RAV1(2)   --------->ARR11(3)   ggtgtctgctcataactcaacaaagagagattgttttcacaaaaaaaaaaagaggaagcagcttttggttcagatgaataatgatgaacaaggtctcagg  4466900                      <---------ANAC46                                          --------->GLK1(2)         --------->DAG2                                                        <---------ARR14(2)        ---------->DOF2                                                        --------->ARR14(2)     --------->AHL20(2)--------->LBD16                                         <---------GLK1(2)   --------->TOE2(3)  <---------ANAC58             <-------GAMYB    <--------P --------->ARR11(3) ---TOE2(2)           <---------ANAC58            <-----------RAV1(1)<-------TEIL       --------->GLK1(2) ---TOE1(2)      --------->HSFB2a(1)       <---------MYB52(2)    <---------TOE2(3)     <---------GLK1(2) ----RAV1(2)     <---------HSFB2a(1) ---------->DOF2<---------MYB52(1)         <---------ARR11(3)   <   tttttcattaaaaagcggaagattgcgcgaatgagagagaaaagaactaactctgttgtttaatattcaggtagattaaaagattctcagaatctaaatg  4467000                                                                                       ---------->DOF2                                                                                   <----------DOF2                                                                                   --------->TOE2(3)                                                                                <---------ARR11(3)                                                                                <---------ARR11(1)                            ------->GAMYB                                       --------->ARR11(3)                           --------->MYB46(3)                                <---------ANAC55(2)                         <-----------GT1                                     --------->ANAC55(2)                      --------->TOE2(3)                                --------->AHL20(1)                <----------DOF2          <---------TOE2(3)             --------->AHL20(2)             <---------ARR11(3)         ---------->DOF2                <---------AHL20(2)       -----             <---------ARR14(2)       <---------AHL20(2)--------->AHL20(2) --------->AHL20(2)  ------             --------->ARR11(3)   <---------AHL20(2)    <---------AHL20(2) <-----------GT1     ------            --------->RVE1(1)     --------->AHL20(2)   --------->YAB1 --------->AHL20(2)   --------->AHL20(2) ---------AHL20(2)  <-----------GT1 --------------------->WRI1 <---------ETT(2)<---------CCA1(2)<----   atttttttttgtgaatatcttttttcttaaccacatttattttaaagtatcgaactattaaaatgtctacaaattaattacatatctttaaaagaaaata  4467100                                                                                         <---------AHL20(2)                                                <---------AHL20(2)                      --------->YAB1       <---------ARR11(3)                       --------->AHL20(2)           --------->AHL20(2)       --------->ARR11(3)                    <----------DOF2                 <---------AHL20(1)     -       <---------GLK1(2)                <---------At4g35610                  <---------AHL20(2)     < ---->ARR11(3)                       <---------MYB52(1)                     --------->AHL20(2)      = --->CCA1(1)                        <-----------TGA1                     <---------ZAT6--------->AHL20(2) --->RVE1(1)                        <-----------HVH21        <---------AHL20(2)    --------->AHL20(2) -----ARR11(3)                     --------->ANAC46         --------->AHL20(2)     <---------AHL20(2)   tctgtgtaagatttttgagagaaaaaaccaaaaaaacccgtcatctacttttaatttgaatatttaatacctgtagtattaaattttaaataaaaatgct  4467200                                             <---------AHL20(2)               <----------DOF2               --------->ICU4              <---------ANAC58               <---------ATHB51              <---------ANAC58      <---------AHL20(2)              <---------ANAC46     --------->YAB1           <---------WOX13(1)      --------->AHL20(2) <---------TOE2(3)           <---------HSFB2a(2)          <------------CBF     --------->AHL20(2)     <---------YAB1              ------>ZmHOX2a(1) --------------->AGL15         <---------AHL20(2)     <xxxxxxxxxxxxxxxxxxxxxsmallRNA(se3) <---------------AGL15        --------->AHL20(2)--------->ICU4                    --------->HSFB2a(2) -------->TOE2(3)       --------->TOE1(3)    --------->AHL20(2)                  --------------->AGL15 -----------------AGL3  --------->TOE2(3)--------->AHL20(2)                  --------->KAN4(2)    <-- ================================================================================================MADS_MADS   taacttaatttggattgcttttaaaaccttcatttaataaaaatgaaataattcttaagatagaacacatttgtatgtttattcctagaatagaacacat  4467300                                                                                <---------AHL20(2)                                                                                --------->AHL20(2)                                                                           <---------YAB1                                                                        --------->ICU4                                                                        <---------YAB1                                                                      --------->ATHB51                                                                      -------->HAHB4                                                                      <---------AHL20(2)                                                                      <---------ICU4                                                                      --------->YAB1                                                                     <---------ATHB51                                                                     --------->ICU4                                                  --------->ANAC46   <---------YAB1                                               ------->GAMYB      <---------AHL20(2)                                       <---------YAB1             <---------AHL20(1)                                      ------------>CBF            --------->AHL20(1)                                     --------->YAB1               --------->AHL20(2)                                     <-----------GT1        --------->TOE2(3)  --------->AHL20(2)                                    <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)--------->YAB1                                   <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)-------->ATHB1    <---------AHL20(2)         ----------->GT1<---------ALFIN1--------->ICU4--------->AHL20(2)    <---------YAB1         <------------CBF <-----------GT1<---------ZAT6<---------ICU4 --------DOF2 <---------At4g35610  <xxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)<--------HAHB4        <--------   cttttttttattactcagatgttttcagtaattgtgtaattacaattaacacccctaactagtcttaattaattattattatttaatttgtttttaacta  4467400                                                                    --------->YAB1                                                          --------->ANAC58                                                          --------->ANAC46                                                          <---------O2                                                          --------->ANAC58                                                          --------->TGA1a                                                          --------->O2                                 <---------ICU4           --------->bZIP60(2)                                --------->ICU4   --------->TOE2(3)  <---------ICU4                                <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3) --------->At4g35610                 <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)    <-----------STF1   <---------AHL20(2)      --------->ANAC46      --------->YAB1    <---------ATHB12 --------->MYB52(1)  <---------AHL20(2)   <-----------GT1  --------->bZIP60(2)<-----------TGA1   <xxxxxxxxxxxxxxxxsmallRNA(i)  --------->AHL20(2)<---------YAB1    <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)  --------->ANAC46 ---GT1        ----------->GT1  <---------YAB1  <---------YAB1   --------->YAB1 --------->LBD16   aaaattaaatgaaaaaacagtgattatacatgtcatcattccatgtcattaccataatccacgtcattaatcatctccaaaccgcataacgtttgggttt  4467500               <---------ZAT6              <xxxxxxxxxxxxxxxxsmallRNA(i)           <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                                   <---------ARR11(3)           xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                                   --------->ARR11(3)          <----------DOF2                                           --------->ANAC58         <---------ANAC58                                           --------->ANAC58         <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                      --------->ANAC46         <---------ANAC58                                        --------->ETT(2) <---------GLK1(1)        ---------->ID1  <---------At4g35610                      <---------ETT(2) <---------CCA1(2)     <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)                xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)    <---------ANAC58    --------->At4g35610             <----------DOF2  --------->ANAC58    <---------ANAC58  <---------ICU4                  ------>ZmHOX2a(1)  --------->ANAC58     <------   cttatttcttggcgttactgttcatcatctcccaaaaaaaaactgtcgatttcttcctctttctctctcgacggaacgaaatcgatatctttcgccgttt  4467600  Previous    Next  AGI:  At4g07675.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G49700.1) Range:  from: 4466010    to: 4467144    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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