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AGI
% Restriction to highly conserved TF binding sites (0-100)
 
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                                                                                                   <
                                                                                            <-------
                                                                                            --------
                                                                                            <-------
                                                                                            --------
                                                                                            <-------
                                                                                            --------
         --------->ANAC58                                                                   --------
         --------->ANAC58                                                                   --------
         --------->DEAR3(1)                                                                 <-------
        --------->SPL7                                                                      --------
        <------NtERF2                                                                       --------
        --------->ATERF1(1)                                                                 --------
       <---------ATERF1(1)                                                                  --------
       ------>NtERF2                                                                 <-----------ARR10
      ----------->HVH21                                                              <---------ARR11(1)
      --------->DEAR3(1)                                                             ------->TEIL  -
     --------->DEAR3(2)                                                              --------->GLK1(2)
------->PCF5                                                                         <---------ARR14(2)
------->SPL7                                                                --------->AHL20(1)   <--
--------ARR14(2)                           --------->ANAC58                 <---------AHL20(1)   ---
------->ARR14(2)                           --------->ANAC46                 --------->ARR11(3)------
--->NtERF2------>NtERF2                    --------->ANAC58                --------->AHL20(2)<------
------ZAT18                      ----------->GT1                  <------ZmHOX2a(1)  --------->ARR14(2)
-----ANAC58                   <---------REM1(1)                  ----------->GT1    <---------CCA1(2)
-----ANAC58                  --------->ARR11(3)  --------->AHL20(2)    --------->AHL20(2)xxxxxxxxxxx
--->At4g35610    <------ZmHOX2a(1)   --------->AHL20(2)         <---------TOE2(3)   <---------ARR14(1)
 
ggaccctagccgacgccctaggaaaaccctaagatgtagtttatataagcaaaaaaatgaaacaaataaggaaactaaatatatagcgaatcttcacgtc  3997400
   ------>ZmHOX2a(1)
  --------->TOE2(2)
  --------->TOE1(2)
 ------>ZmHOX2a(2)
 <xxxxxxxxxxxxxxxxsmallRNA(s)
<xxxxxxxxxxxxxxxxsmallRNA(s)
---------ARR11(3)
--TGA1a
->bZIP60(2)
--bZIP60(1)
->TGA1a                                                                                     <-------
--O2                                                                                       xxxxxxxxx
->ANAC58                       <---------ANAC46                                            <--------
->ANAC58                       <---------ANAC58                                            xxxxxxxxx
->ANAC46xxxxxxxxxxxxxxxx>smallRNA(i)                                                      xxxxxxxxxx
--ANAC55(2)                    <---------ANAC58                                      <-----------RAV1(2)
->O2 ----------->HVH21       --------->MYB52(1)          <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)<------NtERF2
->ANAC55(2)                 xxxxxxxxxxxxxxxxxxxx>smallRNA(s2)                       xxxxxxxxxxxxxxxx
->bZIP60(1)                 ----------->HVH21            ------>ZmHOX2a(2)         <-----------HVH21
->ANAC55(1)               <---------At4g35610        <---------ZAT6                <----------DOF2
-------->ARR11(3)         --------->At4g35610     ==============HOX2a_HOX2a   xxxxxxxxxxxxxxxx>smallRNA(i)
-------YAB1               xxxxxxxxxxxxxxxxxxxx>smallRNA(se3)                  xxxxxxxxxxxxxxxx>smallRNA(s)
------>ICU4               ----------->RAV1(2)     ------>ZmHOX2a(1)       <xxxxxxxxxxxxxxxxxxxsmallRNA(fl3)
--->TGA2(2)     <-----------HVH21                <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)    <---------GLK1(1)
-----TGA1  <xxxxxxxxxxxxxxxxsmallRNA(s)     --------->At4g35610 <xxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)
xxxxx>smallRNA(s) --------->ATHB12          <---------At4g35610xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)
 
atgatcctgcgaccgaatgtgtcattggcatctgacgggctgaaatgagcttcctagtgatcgagtatgtcattgatcaaactgggcttcaggggctccg  3997500
                         xxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)
                        xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)
       ----------->GT1  xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(s2)
      <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)
    <------ZmHOX2a(2)<xxxxxxxxxxxxxxxxsmallRNA(s)
 <---------ANAC58    <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)
 <---------ANAC58    xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)  <---------ZAT18
--ATERF1(1)         <---------ZAT14           <xxxxxxxxxxxxxxxxsmallRNA(s)                     <----
xxxxxxx>smallRNA(s) --------->ZAT14        ----------->HVH21--------->ZAT18               ==========
-ARR14(2)        <---------ANAC46          --------->DEAR3(1)        --------->ALFIN1     ------>ZmHOX2a(2)
xxxxxxxxxxxxxx>smallRNA(se3)    --------->ATHB12       ------>ZmHOX2a(2)      --------->ICU4  <-----
xxxxxx>smallRNA(s)<xxxxxxxxxxxxxxxxxxxsmallRNA(fl3)<---------YAB1  <---------ANAC46   ----------->HVH21
xxxxx>smallRNA(se3) <---------ZAT18       <---------At4g35610   <------ZmHOX2a(2)   --------->ALFIN1
 
tcttgcgatcgagtgaaatgcagtgaagtcgagattgaatggtccagcgaccttgtgatcgagtgcgatcgagtggatgtcatgagggtgtgatcgagtg  3997600
                    <---------ARR14(2)
                    --------->ARR14(2)
                  <xxxxxxxxxxxxxxxxxxxxsmallRNA(si3)         <--------P                       <xxxxx
                  ------>NtERF2                              xxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)
                  --------->LBD16                           <-------GAMYB                     ------
          xxxxxxxxxxxxxxxx>smallRNA(s)                   --------->LBD16                     <xxxxxx
         <---------MYB46(3)               <---------ZAT2<---------LBD16            <-----------HVH21
      <---------ANAC46         <---------ANAC58        <---------LBD16            ----------->HVH21
      ----------->GT1          <---------ANAC58    <----------DOF2               xxxxxxxxxxxxxxxx>smallRNA(s)
      xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)       <---------ANAC58           <xxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)
      <---------ANAC58         <---------ANAC46   <---------ANAC58        ----------------------->TaNAC69(2)
      <---------ANAC58  --------->HSFB2a(2)  xxxxxxxxxxxxxxxx>smallRNA(i)--------->ATHB12   <------NtERF2
-----MYB46(3)   <---------LBD16----------->GT1<---------MYB52(1)      ----------->GT1  <------NtERF2
======================HOX2a_HOX2a         --------->At4g35610xxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)  <
----AtMYB61    ------>ZmHOX2a(1)          <---------At4g35610xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)<-
 
gtttcgatggggtgattcctccggcttcgcgattgagtgaaactgagctgtttgcttctccggggttgcgatagagtgatttgccctggcagggctccga  3997700
                          <------NtERF2
                    xxxxxxxxxxxxxxxxxxx>smallRNA(le3)
                 xxxxxxxxxxxxxxxx>smallRNA(s)
        <---------ZAT18  <-----------HVH21                                                --------->MYB52(1)
<------NtERF2   <---------At4g35610                                                       ------->TEIL
xxxxxxxxxxxsmallRNA(s)  <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                        xxxxxxxxxxxxxxx
--->LBD16   <----------DOF2--------->ATHB12        *TSS  <-----------GT1    ---------->DOF2
xxxxxxxxxxxxxxxxxsmallRNA(le3)                    <XXXXXXXXXXXXXXXXXXXXMIR415 --------->ANAC58     -
xxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)         <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)    ---------->DOF2
--------DEAR3(1)--------->At4g35610       --------->bZIP60(1)------>ZmHOX2a(1)--------->ANAC58   xxx
 
ggctgcgatagagtacttttgctgaaggcgtcattgggcattctgacttcatgttctgtttttcctctgtttgaactccaaaagcatccaaagtacctga  3997800
                     ------------>CBF
                    --------->ANAC58
                    --------->ANAC46
                   ------->MYC3
                   <-------PIF4
                   ------->PIF4
                   <-------MYC3
                   ------->PIF5
                   <-------MYC4
                   <-------MYC2
                   <xxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)
               <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)
              --------->AtLEC2
      <---------ARR14(2)
      --------->ARR14(2)    ------>ZmHOX2a(1)
      xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)
     ------>MYB46(1)--------->ANAC58
     <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)
     ------>MYB83  ------->MYC2
   ------->GAMYB   <-------PIF5
   xxxxxxxxxxxxxxxxxxx>smallRNA(se3)
 --------->ANAC58 <xxxxxxxxxxxxxxxxxxxxsmallRNA(si3)
 --------->ANAC58xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)                          --------->At4g35610
xxxxxxxx>smallRNA(le3)    --------->YAB1                 <xxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)
-------->MYB46(3)------->TEIL                           <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)     xxx
xxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                ----------->GT1         ------>ZmHOX2a(1)  <xxxxxx
 
aaacaaccaaatatgccatgcacatgcaatcctaatgcaaaatcgtccaaagtatgtaaaacacactaaaacgactcctaatgagatgaaatgtggatga  3997900
           xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)
          ----------->GT1
         --------->ALFIN1
      xxxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)
      xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)
     ---------->DOF2              --------->ANAC58                     --------->ZAT6             --
  --------->YAB1      ------->TEIL--------->AtLEC2        xxxxxxxxxxxxxxxxx>smallRNA(se3)   <-------
 xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                   <---------ARR14(2)                 <-------
xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                    --------->ARR14(2)  <---------ATHB12<------
xxxxxxxxxxxxxxxxxxxx>smallRNA(se3)--------->ANAC58    <---------ANAC55(2) <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)
xxxxxxxxxxxxxxxxsmallRNA(l2)   <---------ATHB12       --------->ANAC55(2) <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)
 
aacaatgacaaagtggtgaagaatgaatgcctaaatcatgcaaattatagacatatcacatattcgactccaaaacactaatcaagcttcttcttgcttt  3998000
                                                                                             <xxxxxx
                                                                                             <xxxxxx
                                                                                             <------
                                                                                            <xxxxxxx
                                                                                            <xxxxxxx
                                                                                           <xxxxxxxx
                                                                                          <---------ANAC46
                                                                                          <xxxxxxxxx
                                                                                          <xxxxxxxxx
                                                                                          <---------ANAC58
                                                                                          <---------RAP2.6(2)
                                                                                          <---------ANAC58
                                                                                         xxxxxxxxxxx
                                                                                         xxxxxxxxxxx
                                                                                         xxxxxxxxxxx
                                                                                         xxxxxxxxxxx
                                                                                        xxxxxxxxxxxx
                                                                                        xxxxxxxxxxxx
                                                                                        xxxxxxxxxxxx
                                                                                    <---------TOE1(3)
                                                                                    <---------TOE2(3)
                                                                                  xxxxxxxxxxxxxxxxxx
                                                                                  xxxxxxxxxxxxxxxxxx
                                                                                  xxxxxxxxxxxxxxxxxx
                                                                                <------ZmHOX2a(1)  -
                                                                              <---------TOE2(3) <xxx
                                                                          xxxxxxxxxxxxxxxxxxxx>smallRNA(si3)
       <---------MYB52(1)                      <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)--------->DAG2 <
   <----------DOF2                           ------->TEIL                 xxxxxxxxxxxxxxxxxxxx>smallRNA(le3)
   --------------------->WRI1                --------->ARR14(2)        xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)
-------->DOF2                                <---------ARR14(2)  <---------ALFIN1 xxxxxxxxxxxxxxxxxx
--ANAC58               <-------TEIL     <----------DOF2 --------->ANAC58  xxxxxxxxxxxxxxxxxxxx>smallRNA(se3)
--ANAC58       xxxxxxxxxxxxxxxx>smallRNA(i) <---------CCA1(2)  <xxxxxxxxxxxxxxxxsmallRNA(s)<xxxxxxxx
----DOF2 --------->MYB52(2)           <---------YAB1    --------->ANAC58  <----------DOF2<xxxxxxxxxx
 
tcaaagctttgttagtttagccgaagtccatatgagtatttatctttgtatcttctaacaaggaaacaccacttaggcttttaggataaggttgcggttt  3998100
                                          <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)
                                          <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)
                                         <xxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)
                                    xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)
               <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)
       --------->ANAC46             xxxxxxxxxxxxxxxxx>smallRNA(se3)
  <---------YAB1                   --------->ARR14(2)      --------->HSFC1(2)
xxxxxxxxxxsmallRNA(i)             <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)
xxxxxxxxxxsmallRNA(s)             <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)
----DOF2     --------->YAB1  --------->ANAC58             ------>MYB46(1)
xxxxxxxxxsmallRNA(i)         --------->ANAC58   <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)
xxxxxxxxxsmallRNA(s)        <xxxxxxxxxxxxxxxxxxxxsmallRNA(se3)
xxxxxxxxsmallRNA(s)       <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)
xxxxxxxsmallRNA(i)       xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)
xxxxxxxsmallRNA(s)<xxxxxxxxxxxxxxxxxxxsmallRNA(si3) <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)
xxxxxxxxxxxx>smallRNA(si3)<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)
xxxxxxxxxxx>smallRNA(se3)xxxxxxxxxxxxxxxx>smallRNA(i)     ------>MYB83
xxxxx>smallRNA(i) xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3) xxxxxxxxxxxxxxxx>smallRNA(i)
xxxxx>smallRNA(s)xxxxxxxxxxxxxxxxx>smallRNA(si3)<xxxxxxxxxxxxxxxxsmallRNA(i)
xxxxxxxxxxx>smallRNA(se3)xxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)<---------HSFC1(2)
xxxxxxxxxxx>smallRNA(i2) <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                   <----------DOF2
xxxxxxxxxxx>smallRNA(fl3)<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)              ---------->DOF2
xxxxx>smallRNA(si3)     --------->bZIP60(1)    xxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)     <------MYB46(1)
xxxx>smallRNA(se3)<xxxxxxxxxxxxxxxxxsmallRNA(si3)--------->ZAT6       <---------ANAC58 <---------MYB46(3)
xxxxx>smallRNA(fl3)  ----------->HVH21  <xxxxxxxxxxxxxxxxxxxxsmallRNA(si3)<---------HSFB2a(2)
-------->ARR11(3)<xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)  --------->MYB46(3) --------->HSFB2a(2)xxxxxxx
xxxxxxxxxxxxxxxxxxxxsmallRNA(i2)<xxxxxxxxxxxxxxxxsmallRNA(s)          <---------ANAC58 <------MYB83
---------ARR11(3)xxxxxxxxxxxxxxxxxxxx>smallRNA(si3) <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3) xxxxxxxxxx
xxxxx>smallRNA(se3) <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3) <xxxxxxxxxxxxxxxxsmallRNA(fl3)  <xxxxxxxxx
xxxxxxxxsmallRNA(i)--------->ANAC46<---------ARR14(2) -------->P  xxxxxxxxxxxxxxxx>smallRNA(s)
xxxxxxxxxxsmallRNA(fl3) <---------bZIP60(1)  <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3) <-----------RAV1(1)
 
aagttcttatactccatcatacacatgacatcaagtcatattcgactccaaaacactaaccaagcttcttcttgcttctcaaagctttgttggtttagcc  3998200
                                                            --------->CCA1(2)
                                                           --------->ARR11(3)
                                                           --------->ARR14(2)
                                                           <---------ARR14(2)
                                                    xxxxxxxxxxxxxxxx>smallRNA(s)
                                                 xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)
                                                 xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)
                                                xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)
                                              xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)
                                           xxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)
                                          xxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)
                                        <xxxxxxxxxxxxxxxxsmallRNA(i)
                                        xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)
                                        --------->ZAT6    <------ZmHOX2a(1)
                                       <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)
                                       xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)
                                       <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)
                                      xxxxxxxxxxxxxxxxx>smallRNA(si3)
                                      <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)
                                      xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)
                                      xxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)
                                     xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)
                                     <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)
                                    xxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)
                                    <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)
                                    <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)
                                    <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)
                                    <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)
                                   <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)
                                   xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)
                                   xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)
                                   xxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)
                                   xxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)
                                  <xxxxxxxxxxxxxxxxxxxsmallRNA(fl3)
                                  <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)
                                  --------->ANAC58  <----------DOF2
                                  <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)
                                  xxxxxxxxxxxxxxxxxxx>smallRNA(se3)
                                  xxxxxxxxxxxxxxxxxxxx>smallRNA(le3)
                                  <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)
                                  --------->ANAC58  xxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)
                                  xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)
                                  xxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)
                                 xxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)
                                 <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(s2)
                                <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(s2)
                                <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)
                                xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)
                                xxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)
                                <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)
                                xxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)
                                <xxxxxxxxxxxxxxxxxxxxsmallRNA(le3)
                                xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)
                                xxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)
                                xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)
                               <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)
                              <xxxxxxxxxxxxxxxxxxxxxsmallRNA(l2)
                             <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)
                             <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                         ---------
                             xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                         <---------ATHB12
                             <xxxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                  --------->ANAC46
                          <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                      xxxxxxxxxxxxxxxx
                         <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3) <---------YAB1       xxxxxxxxxxxxxxxxx
                       --------->ARR14(2)<xxxxxxxxxxxxxxxxsmallRNA(s)             <xxxxxxxxxxxxxxxxx
                       ------->TEILxxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)          <xxxxxxxxxxxxxxxxx
                       <---------ARR14(2)<xxxxxxxxxxxxxxxxsmallRNA(i)             <xxxxxxxxxxxxxxxxx
            <----------DOF2 <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(l2)                  <xxxxxxxxxxxxxxxxx
   <xxxxxxxxxxxxxxxxsmallRNA(s)xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)             <xxxxxxxxxxxxxxxxxx
   xxxxxxxxxxxxxxxx>smallRNA(s)xxxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)            <xxxxxxxxxxxxxxxxxx
   <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)    <xxxxxxxxxxxxxxxxxx
   <xxxxxxxxxxxxxxxxsmallRNA(i)xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)            <---------YAB1
  <xxxxxxxxxxxxxxxxsmallRNA(s)xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)             xxxxxxxxxxxxxxxxxxxx
  xxxxxxxxxxxxxxxx>smallRNA(i)<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)             <xxxxxxxxxxxxxxxxxxxsmallRNA(s2)
 <-------TEIL     <----------DOF2xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)       <---------ARR11(3)
<xxxxxxxxxxxxxxxxsmallRNA(s)<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)  <---------At4g35610  --------->WOX13(1)
xxxxxxxxx>smallRNA(i) <---------CCA1(2)<xxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)   --------->ARR11(3)  ---
xxxxxxxxxxxxx>smallRNA(le3) <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)<--------P xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)
xxxxxxxsmallRNA(s)xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)  <---------TOE2(3) <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)
 
gaagtccatatgagtctttgtctttgtatcttctaacaaggaaacactacttaggcttttaggatatggttgctgtttaagttcttatactcaatcatac  3998300
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AGI:  At4g06716.1   
Description:  transposable element gene. similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G37015.1)
Range:  from: 3997489    to: 3997752    Orientation: Reverse
Links:  TAIR  MIPS 
 
 
Please cite the corresponding publications when using AthaMap.

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