Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                      ----------->GT1               <-----------GT1                                 ------>ZmHOX2a(1)              --------->AHL20(2)                             <---------ARR14(2)        <---------YAB1                        ---------->DOF2                <---------ATHB12           <----------DOF2   --------->ARR14(2) ----------->RAV1(1)     <----------DOF2<---------At4g35610        --------->MYB46(3)<-----------GT1 ---------DOF2      --------->At4g35610   --------->YAB1--------->YAB1        --------->YAB1   tctttctctttttctttaagtctgctaaaagtatcctctggtaataacaacaacacaatgatacaatttaacattcacaaacatgaaaattagattaaaa  3766200                                                                 <---------SPL7                                                           <---------ANAC58                                                           <---------ANAC58                                                         <---------ARR14(2)                                                         <---------AHL20(1)                                                         --------->ARR14(2)                                                         --------->AHL20(1)                                                         <---------ARR11(3)                                           ====================RAV<---------PCF2                <----              ----------->HVH21            ----------->RAV1(2) --------------->AtSPL8           -----             <-----------HVH21 ----------->HVH21         --------->ARR11(3)                     -----          ----------->RAV1(2)--------->At4g35610         --------->ARR14(3)                    <-----          <---------At4g35610<---------At4g35610   ----------->RAV1(1)                  <----------DOF2        <-----------GT1  <---------ANAC46<---------ALFIN1<---------ARR14(3)  ---------->DOF2 <-------   catcacaatttcacctgtgacccatttgtgtagatgacactttccacctgtagcaacaatatcttgtggtaccctaaaacaaaggagaaacttttaagaa  3766300                                                                  <------ZmHOX2a(1)                                                               <-----------RAV1(2)                                                              --------->ZAT2                                                              <---------ZAT2                                                              --------->At4g35610                                                        <-----------HVH21                                                       --------->ANAC46                                      <-----------GT1  --------->bZIP60(2)                     <-----        ---------->DOF2            --------------->AtSPL3   --------->ANAC46      <------ZmHOX2a(1)     --------->TOE2(3)             --------------->AtSPL8--------->ZAT14        <---------TOE1(3) -----ARR14(2)                     --------->DAG2    <---------ALFIN1           <---------TOE2(3) --- ---->ARR14(2)                     <---------------AtSPL8<---------ZAT14    <----------DOF2    ------ ---->GLK1(2)          <XXXXXXXXXXXXXXXXXXXMIR3434  =====================================HOX2a_HOX2a ----GLK1(2) <---------ANAC55(2)  ---------->DOF2   =====================HOX2a_HOX2a       <---------CCA1(2) --TOE2(3)   <---------ANAC46 --------->YAB1        ------>ZmHOX2a(2) <----------DOF2<---------MYB46(3)   tctgtaatctaaaagacgtataagtgatggaatcagaaaagtaccattctttgatccacttcacagcaggagctttggatttaaggatgggtcgtctctc  3766400                                                     <---------MYB46(3)                                      <---------AHL20(2)   --------------------->WRI1             ---   --------->ARR11(3)                <---------AHL20(2)    <----------DOF2               <---------ARR14(2)  ==================================HOX2a_HOX2a  --------->DAG2                          --------->ARR14(2)  <------ZmHOX2a(1)   <---------YAB1 --------->AHL20(2)--------->ARR14(2)               <------ZmHOX2a(1) ----HSFB2a(2)     --------->ICU4   <---------WOX13(1) <---------ARR14(2)            --------->YAB1 ------->DOF2----------->GT1      --------->ATHB12  --------->ALFIN1         --------->ATHB12<------- --->HSFB2a(2)--------->YAB1 ------>ZmHOX2a(2) ---------->DOF2              <---------YAB1  ---------   gaaaggattttggtattgataattttgatgatccattgatttatttgggtaaaggtggttcctttgtgagttttgagtacgattgaatcaggatttgggg  3766500                                                      --------->YAB1           --------->LBD16                           <---------YAB1           <---------LBD16                         <----------DOF2       <---------ARR14(2)                  --------->ANAC58    <---------TOE2(3)                      --------->ANAC58 -------->ARR10 ---------->DOF2        --------->TOE1(3)                   *TSS            <--------- --LBD16  <---------HSFB2a(2)        --------->ARR11(3)           <---------LBD16<---------At5g28300 >ALFIN1  <---------ANAC46           <---------ARR11(3)        <---------GLK1(1)<-----------GT1   gagattagggttctggggaaaagaacgatagagaagagagaccttaagcaatactttgataatggagtcccggttcgatttgttactgtgtttataccgg  3766600                                                                               --------->GLK1(1)                                                       <---------At5g28300------->TEIL   --------->ANAC58                                                <------MYB46(1)         --------->ZAT18  --------->ANAC58               <<<<<<<<<GT-1   <---------AHL20(2)     <-----------GT1 <---------------AtSPL8               <-----------GT1--------------------->WRI1              --------------->AtSPL8         <---------GLK1(2) <---------AHL20(2)   <------MYB83          <---------------AtSPL3     <---------LBD16      <---------YAB1        <---------MYB46(3)   <---------ANAC46  ---------->DOF2 --GT1 --------->LBD16   <---------AHL20(2) <---------MYB46(3)   --------------------->WRI1         <   tttatagaccggattattaaccagtatttttatttagttagtatcgttgttggtttttaccggtttacattatgtgtaccgatttctctgaaagcaaatg  3766700                                                                                                   --                                               <---------ARR14(2)                                  <-                                               --------->ARR14(2)                                ----                                               --------->ARR11(3)                               <----                                         <-----------GT1                                       <-----                                    <---------YAB1           ----------->HVH21<---------------AtSPL8                                   --------->AHL20(2)     <-----------HVH21--------->ANAC58   ------- ----------DOF2---------->DOF2   --------->ICU4<---------ARR11(3)          --------->ANAC58<---------ICU4   ggcttttattctgtcttaaaaggcttctaaatgaaatttttataaacaatatctggtttcggtcggacatgtatagtaagcatgtacagttcaaaattat  3766800          --------->ATHB51          --------->YAB1                --------->AGP1          --------->ATHB12        --------->ANAC46          <--------HAHB4          --------->ANAC58         <---------YAB1           --------->ANAC58            --------->YAB1  --------->YAB1         <---------ATHB51       <---------ALFIN1 <---------AHL20(2)  <---------AHL20(2)    <-----------GT1  <-----------GT1 --------->HSFB2a(2)     --------->AHL20(2)  --------->AHL20(2) ------->ICU4       <-----------GT1  <---------HSFB2a(2) --------->AHL20(2) --------->AHL20(2)      < --------YAB1--------->YAB1--------->ANAC46    <---------AHL20(2)   --------->AHL20(2)              - ----->YAB1 <---------YAB1------>MYB46(1)     <---------AHL20(1)    <---------AHL20(2)     --------->CCA1(2) -----YAB1<---------ICU4  ------>MYB83--------->LBD16  <---------TOE2(3)  <----------DOF2 --------->ARR11(3) ------GT1-------->ATHB1--------->TOE1(2)     <---------ARR11(3)    <---------AHL20(1)    <---------ARR11(3) -->YAB1 --------->ICU4 --------->TOE2(2)     --------->AHL20(1)    --------->AHL20(1)---------->DOF2   catttttaacaattattagaatttaacctacgatacactccagaactatatatttttaagaaaataaaaatttattcttttaataaactaaagatatata  3766900                                                          --------->YAB1                                                          <---------ICU4                                                  <---------AHL20(2)                                                 <---------AHL20(2)                                              --------->AHL20(2)                                          --------->AHL20(2)                                          --------->AHL20(1)                                          <---------AHL20(1) <-----------GT1                                          <---------ARR11(3)--------->ICU4    <---------TOE2(3)               <---------ARR11(3)   <---------AHL20(2) <---------YAB1         -- ----------DOF2                    <---------CCA1(2)     <---------YAB1     <---------AHL20(2) <----- -------->TOE2(3)     --------------->AtSPL8 <---------AHL20(2)   <---------YAB1        --------->AHL20(2)   tactttaatgttttgtattttctaaatgtacaactctatatctatatattatttattgtataattactatgtttgatttttattgtttaaaaatatagga  3767000                                <---------HSFB2a(2)                                --------->HSFB2a(2)                               ------>ZmHOX2a(2)                              --------->CCA1(2)                             <---------AGP1                             --------->ARR11(3)                             --------->AGP1                                --------->ARR11(3)                             <---------ARR14(2)                     --------->YAB1                             <---------ARR11(3)                    <------ZmHOX2a(2)                             --------->ARR14(2)              -------->P--------->MYB52(1)                           ----------->ARR10                 ------>MYB83  <---------ARR11(3)                        XXXXXXXXXXXXXXXXXXXXXXX>MIR163     ----------->HVH21                       <---------YAB1                      --------->DEAR3(1)                  <---------TOE2(3)       --------->At5g28300------>MYB46(1)         <---------MYB52(1)  --------->AHL20(2)  --------->AHL20(2) ----------->GT1  --------->MYB46(3)<---------RVE1(1) ------->YAB1     ----------->GT1  --------->ARR14(2)     --------->DEAR3(2)<---------CCA1(1)   <---- -ZmHOX2a(1)--------->AHL20(2)<------ZmHOX2a(2)<-----------GT1     <---------ATHB12 <-------GAMYB   acaataacatacaattcattaagttaaaatagatctggaacttcggtaaaaaccgtttgaaccgacccgatcataacgatattttcggttatcggtataa  3767100  Previous    Next  AGI:  At4g06634.1    Description:  zinc finger (C2H2 type) family protein. Identical to Uncharacterized zinc finger protein At4g06634 [Arabidopsis Thaliana] (GB:Q2V3L3;GB:Q27GJ7;GB:Q8W3M5); similar to ELF6 (EARLY FLOWERING 6), transcription factor [Arabidopsis thaliana] (TAIR:AT5G04240.1); similar to unknown [Populus trichocarpa x Populus deltoides] (GB:ABK96475.1); contains InterPro domain Zinc finger, C2H2-like; (InterPro:IPR015880); contains InterPro domain Zinc finger, C2H2-type; (InterPro:IPR007087); contains InterPro domain Zinc finger, C2H2-type/integrase, DNA-binding; (InterPro:IPR013087) Range:  from: 3764299    to: 3766575    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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