Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100        <---------ZAT6                  <------MYB46(1)  --------->ICU4                     <---------AtMYB61  <---------YAB1          --------->TOE2(3)                           <---------ANAC58 ---------ICU4       --------->ICU4  --------->MYB59                  <---------ANAC46 -------->YAB1  ----------->GT1      --------->MYB111(1)              <---------ANAC58 ------->ICU4   <---------ANAC55(2)  --------->MYB46(2)        <---------------AGL15             ---- --------ATHB51 --------->ANAC55(2) <--------P            <---------ICU4----------->GT1          ---- ---->GT1---------->DOF2<---------YAB1<------MYB83       <---------YAB1 <---------ZAT6    --------->AtLEC2   aataatgagtgtaaagacatgtaattttcattaacagggtaggttttgtattttagacgataattccatatggagtgtttataatctaattcatgcatga  2985000                                                                 ------->GAMYB                                                                --------->MYB46(3)                                                               -------->P                                                               ------>MYB46(1)                                                              --------->MYB55(1)                                                              --------->MYB52(1)      <---------RVE1(1)                                      --------->AtMYB61      <---------CCA1(1)                                      --------->MYB46(3)                  ----     --------->ARR14(2)                                     --------->DEAR3(2)                   <---     --------->ARR11(3)                                     --------->MYB46(3)             <------ZmHOX2a(1)     <---------ARR11(3)                                   <<<<<<<ZML2                   <-----------RAV1(2)    --------->YAB1                                     --------->HSFB2a(2)           <---------ZAT14   ----------->ARR10                                   ------>ZmHOX2a(1)             <---------ZAT18 ---------->DOF2                                 <---------ICU4------>MYB83          --------->ZAT14 ----->ZAT18                     ----------->HVH21     <---------HSFB2a(2)           --------->ZAT18 ----->At4g35610      --------->ZAT6             <---------AHL20(2)xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)   gcacaaagatattcttatatatgaacactctatgggtgacatatgagttaataaatcctagaaccaaccgctatgagacataaccagtgcgcaggagaag  2985100                                                                                        --------->ALFIN1                                                                                       ------->MYC3                                                                                       <-------MYC3                                                                                      <---------O2                                                                                      <---------ANAC46                                                                                      --------->O2                                                                                     ------>MYB83                                                                                     ------>MYB46(1)                                                                                    --------->MYB52(1)                                                                   <---------ANAC46--------->TOE2(2)                                          --------->ATHB12    <------MYB46(1)      --------->TOE1(2)            --------->ALFIN1             <---------YAB1       <------MYB83        --------->MYB46(3)   <---------YAB1                    <---------ANAC58        <---------TOE2(3)    --------->DEAR3(2) ----->ARR11(3)              <---------YAB1                  --------->MYB59   --------->ZAT18     -- ------ARR11(3)      ---------->DOF2 <---------ANAC58    --------->ATHB12      <---------ZAT14    <--   aacttatagttggagttgggaccaaaagattacaatttgacttgttattggctacgatttgattaggtttcatgtagagagtgaaccaacgtggatgaga  2985200                                                                                                 ----                                                                                    --------->ATHB12                       ---------->DOF2                                             --------->ICU4----               --------->At4g35610                                            --------->ANAC58   <---          --------->ANAC58                                                    --------->ANAC58   <---          --------->ANAC55(2)                                            --------->LBD16       ------          --------->ANAC58                                              <---------ANAC46   ==========       <---------ARR14(2)                                              <---------LBD16  --------->ATHB12 ------->ATHB12<---------At4g35610                               ---------->DOF2   <---------ATHB12 -----TEIL<---------ANAC55(2)           --------->ANAC46    <---------ANAC46---------->DOF2------>ZmHOX2a(2)   ttcattggggaaacgtaagcagacataaagacaactctctatacgacctaagagtgagcgagtcttgtaaagctccggagaagcaatgagtgatcggaag  2985300            <------ZmHOX2a(1)          <---------TOE2(3) ----->ARR11(3)             <---------ZAT14 ----->ARR14(2)             --------->ZAT14                     --------->ANAC46                    - ------ARR11(3)             <---------ZAT18          --------->At4g35610                           <- ------ARR14(2)             --------->ZAT18          <---------At4g35610     <----------ID1   ------- --->HSFB2a(1)    --------->GLK1(2)               <---------At4g35610    <------ZmHOX2a(1)    <------ ==================HOX2a_HOX2a          <---------O2 --------->ZAT2<---------ICU4      <----------DOF2   ttcttcaaaactaaggagagaatcgaatagtgcaatctcgagacatgggctaagcagcttactaacacatcatgaggaagggacaaactctttttctgct  2985400                                          --------->ICU4                                     --------->ANAC46                      <---------ANAC58 ----------------->AGL2                      <---------ANAC58 ----------------->AGL3                    <---------MYB52(1)------>NtERF2       <---------ATHB12              --------->ANAC58     --------->MYB52(1)    ----------->HVH21   --------->MYB111(1)   --------->MYB46(3) --------->MYB52(2)  <---------MYB52(1)                                        - ----->ZmHOX2a(1)----------------->AGL1============================================================== --------MYB59  <---------At5g28300  --------->ANAC58                                               < -->At4g35610  <-----------GT1      --------->ATERF1(1)                                           <-- ---At4g35610<----------DOF2       <---------ATERF1(1) <-------TEIL                        --------->CCA1(2)   tcctaaccaatggctctttaccgttcgtggtgactggagacgccattagtagttagattcaacgctgatttgaaaattaggggttttacatagataagcg  2985500             --------->ZAT6      --------->LBD16     <---------ANAC58     <---------ANAC46     <---------ANAC58                                                                       <--------     <---------LBD16                                                                        <--------    <---------LBD16                                                                       <---------TOE1(2)   ------>MYB46(1)                                                                     <---------ANAC58   --------->MYB52(1)                    --------->ICU4                       <---------ARR11(3)   ------>MYB83                        --------------->AGL15                  <-----------ARR10 -------->HSFB2a(1)                    <---------------AGL15   --------->AHL20(2)      <---------ANAC58 ======================================================MADS_MADS              --------->ARR11(3) ---------HSFB2a(1)                   ----------------->AGL2   <---------AHL20(2)   <----------DOF2<- -------ARR14(2)             <---------TOE1(2)                --------->YAB1 <---------GLK1(2)     <-   aaaccttccgggctcacactagccctagtcttgggtttaagcccttattagaaacttgatgctattaaaatcaaaaacaaaatctcctttcgtacttttg  2985600                                                                                                   --                                                                                                -----                                                                                               <-----                                                                                            ---------                                                                                            <--------                                 <---------WOX13(1)                                       --------->AHL20(1) --DOF2                         <---------ANAC58                                          <---------AHL20(1) -DAG2       --------->YAB1     <---------ANAC58                                  <---------ANAC55(2) --------ANAC58  --------->DAG2 <------------CBF      ----------->GT1             ----------->GT1 <-- --------ANAC58 ---------->DOF2--------->ATHB12    <------------CBF      <---------YAB1  --------->AHL20(2)   gacttgcctcatcaaatataaagttgacatgtttgattgccaaaacaaaaacaaattggagaaaactctcgacttatgagtaataggtaaaatatatatt  2985700                           <------------CBF                         <---------YAB1                  <-------TEIL                  ======================HOX2a_HOX2a                  ------>ZmHOX2a(2)                 =======================HOX2a_HOX2a         ------------>CBF<---------------AGL15               ----------->GT1        <<<<<<<<<<<<<<<<<LFY                       --------->HSFB2a(2)    ---------->DOF2      --------------->AGL15     <---------HSFB2a(2) ------->YAB1    <------ZmHOX2a(2)            <---------ARR11(3) ---->YAB1      <---------ARR14(2)            --------->ARR11(3) ----AHL20(2)   --------->ARR14(2) ----------->GT1 --------->HSFC1(1) >AHL20(1)      ------->TEIL     ======================HOX2a_HOX2a -AHL20(1) --------->MYB52(1)    <------ZmHOX2a(1) <---------HSFC1(1)     --------->YAB1         <--- -------YAB1 <---------ATHB12  <---------TOE2(3)------>ZmHOX2a(2)        <---------YAB1<-----------GT1   atcatataaagcccaatggatccatttcttattgaggaagtaaaacatgatctctagaaaatatagttaagacttatgatagaaatattaaacaacttga  2985800                                               --------->ANAC58                                               --------->ANAC58                      <-------TEIL   -                                               --------->ANAC46                     <------ZmHOX2a(2)                                    --------->AHL20(2)                             --------->ARR14(2)                                   <---------AHL20(2)                              --------->AGP1   -                                   --------->ICU4                                  --------->ARR11(3)                                   --------->AHL20(2)     --------->AHL20(1)       <---------ARR11(3)                                   <---------ATHB51      --------->YAB1            <---------ARR14(2)                               --------->AHL20(2)   <---------MYB52(2)         ---------->DOF2 ------    ----------->RAV1(1)       ----------->GT1 --------->DAG2            --------->ARR11(3)    ------- ------YAB1             <---------LBD16      ---------->DOF2          <---------ATHB12       <xxxxxxx   tgaatacaacatagaatacacaaattttcggaatgaaataattttaaaaaagcaactaaacatattatacaaatgattttgcaaagatccattccataaa  2985900  Previous    Next  AGI:  At4g05620.1    Description:  F-box family protein. Identical to Putative F-box protein At4g05620 [Arabidopsis Thaliana] (GB:Q9M0U2); similar to kelch repeat-containing F-box family protein [Arabidopsis thaliana] (TAIR:AT4G39600.1); similar to 117M18_27 [Brassica rapa] (GB:AAZ66946.1); contains InterPro domain Cyclin-like F-box (InterPro:IPR001810); contains InterPro domain Galactose oxidase/kelch, beta-propeller (InterPro:IPR011043) Range:  from: 2985048    to: 2985446    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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