Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100         ----------->GT1 ---->ZmHOX2a(1) -->ZmHOX2a(2) ------->RAV1(2) --ZmHOX2a(2) --->AGP1 --->ARR14(3) --->ARR11(3) --->ARR14(2) ----ARR14(2)                                                           ------->TEIL ----ARR11(3)                                                  <---------ETT(2) ----ARR14(3)                                                ------>MYB83                    -------- ----GLK1(2)      ---------->DOF2                            --------->MYB52(1)      --------->GLK1(2) ---GLK1(1) XXXXXXXXXXXXXXXXXXXX>MIR863-3P               --------->GLK1(2)          <---------GLK1(2) -->GLK1(1)---------->DOF2--------->YAB1   --------->MYB52(1)------>MYB46(1)   <------ZmHOX2a(1)  <--   cctgaggtctggtaaaagaaaaaagacataataacttagtttaactaagagagagagagaacctatcgacgatgtaactgaggagagaatcgctcacgaa  2767600                                                             --------->HSFB2a(2)                                                             <---------HSFB2a(2)                                                       <-------MYC2                                                       ------->MYC3                                                       <-------PIF5                                                       ------->MYC2                                                       <-------MYC3                                                       ------->PIF5                                                   <------NtERF2                                                  ------>NtERF2                                                 --------->ANAC58                                                 <---------ATERF1(2)                                                 <---------RAP2.3(3)                                                 --------->ANAC58                                                 --------->ATERF1(2)                         <---------ZAT2          --------->bZIP60(1)                    --------->ANAC46             <---------bZIP60(1)                    --------->ANAC58            --------->RAP2.6(3)       ----------------------->TaNAC69(2)     ----------->HVH21      --------->TOE2(3) ------>NtERF2        <-----------HVH21      --------->YAB1--------->ANAC58 <------ZmHOX2a(2) <-------MYC4 ->ANAC46        --------->STY1(2)  <---------ARR11(3) ------->PIF4                        --------->ANAC58 -------ZAT6     <---------STY1(2)  --------->ARR11(3) <-------PIF4                        --------->ANAC58   gtgttcaatgttaatctctagcaagccaccttggctgagatcaacaatgtgacggcacatgctctcgaaatcgaactcgtacatgaggcagtctcgcaag  2767700                                         --------->ANAC58                                         --------->ANAC58                                         <---------ALFIN1                                  <-----------HVH21                                 --------->ANAC55(2)                                 --------->O2                  <---------HSFB2a(1)   ------>NtERF2                  --------->HSFC1(2)   <---------ALFIN1                  --------->HSFB2a(1)  --------->DEAR3(1)                  <---------HSFC1(2) ------>NtERF2            ------->MYC3         <---------O2  <---------REM1(2)            <-------MYC3         <---------ANAC55(2)                                          <------           <---------O2          --------->ANAC46                                           <------NtERF2           --------->O2         <-------TEIL   --------->ZAT14                      <----------CDC5         <---------ALFIN1      --------->CCA1(2)               --------->DOF5.7(2)--------->ANAC58         ----------->RAV1(1)  <---------ARR14(2)         <---------ANAC58         --------->ANAC46       ------>NtERF2          <---------GLK1(2)<---------ZAT14<-------GAMYB       --------->ANAC58 --       --------->LBD16        --------->ARR14(2)         <---------ANAC58     <-----------HVH21   <--      --------->ANAC46        --------->ARR11(1)      --------->ARR14(2)     --------->WOX13(1)   ===     <---------LBD16   <----------DOF2<------NtERF2--------------->ANT       --------->ANAC46 -------   ttgattttccgccacatggaagggtctttacagatacgtcgccacgctctgcacagtttccgagcgttatccagtatatcagtcacgctaagtcggagca  2767800                           --------->MYB46(3)                          --------->CCA1(2)                         --------->AGP1                         <---------ARR11(3)                         <---------ARR14(2)                         --------->ARR14(2)                         --------->ARR11(3)                       ----------->ARR10                     <------NtERF2                 --------->LBD16                <---------DEAR3(1)            --------->At4g35610            <---------At4g35610          <---------WRKY12<------ZmHOX2a(2) ------>ZmHOX2a(2)<---------LBD16                                                    <--------------- ---ZAT2 --------->DOF5.7(2)<---------ALFIN1                                 <-------GAMYB ------->ARR14(2)------>NtERF2                                               ----------------------->TaNAC69(2) ----ZmHOX2a(1)<---------LBD16--------->ANAC46                              <---------MYB46(3) ================================HOX2a_HOX2a                       --------->YAB1   ------>ZmHOX2a(1) -->ZAT2<-----------HVH21<-----------ARR10             <----------DOF2     <---------AtMYB61    <----   ggatcgaagtcgtcaactccggcggaagatccacccagttgattcgctcttcatcgtctttcttcagaaacatagtggaggttgtccttctcttgtttct  2767900                                                                                         --------->At4g35610                        --------->MYB46(3)                                              --------->ANAC46                    --------->At4g35610     <--------P<---------ANAC58                --------->At4g35610               --------->YAB1              <-------GAMYB                            <---------ICU4 <XXXXXXXXXXXXXXXXXXXMIR157D              <---------MYB46(3)                     --------->YAB1 ---------ANAC81   --------->ANAC46      <---------AtMYB61         <----------DOF2  --------->YAB1 ------DOF2 <----------DOF2           --------->ALFIN1<---------ANAC58        <----------DOF2    <---   ttgctcttcatcttctttcatcagcaacgactgcaacgtagtggaggttgccattttcttgtttcttcgctcttcgttttctttcatcatcagcaacgag  2768000                                                                                            ---------                                                                                            <--------                                                                                            ---------                                                     --------->ANAC55(2)                    <--------                      ----------->GT1            --------->ALFIN1                           ---------                      <------MYB83              <---------------AtSPL8                      <--------                      <------MYB46(1)        --------->ZAT14                          <---------WOX13(1)                     --------->MYB59         <---------ZAT14 <---------ANAC46        <------------CBF            <------ZmHOX2a(1)  ----------->GT1 <---------ANAC46            --------->At4g35610 ------GLK1(2)  <---------TOE2(3)     --------->YAB1------->TEIL           <---------At4g35610     <-   gttctcatttgtgaggataagattaggtcaaattagtgaataataagtgaagtgtacgtagtttcggacatttgggcttctgtctctaattgaaaatctg  2768100                                      <------MYB46(1)        --------->ZAT14               <------MYB83        <---------ARR14(2)  --------->ANAC58        <---------ZAT14     --------->O2        --------->ARR14(2)  --------->TGA1a <------NtERF2              <---------TGA1a                                                     ----- >ARR14(2)                  --------->bZIP60(2)                             <---------ALFIN1    <---- -ARR14(2)                  <---------O2                                  ----------->RAV1(1) ------- >ARR11(3)                  --------->ANAC58                           --------->ANAC58       ------- ---ARR10              --------->ANAC46        --------->YAB1 --------->ANAC58              <-------- >GLK1(2)              --------->ANAC58       <---------ATHB12--------->ANAC58              --------- -ARR11(3)             --------->ANAC58   ------------>CBF    --------->ANAC46     <----------DOF2 --------DEAR3(1)   <-------TEIL     --------->MYB59------>ZmHOX2a(1)  --------->ANAC58   ------>NtERF2   gtcgtcgtagtatacggttcgattcatgccacgtctgattaggtctcaataatcctgaagactcaagcaagtccagccacacatacttttgccaccacat  2768200                   --------->TOE2(3)                --------->KAN4(2)               <---------HSFC1(2)               <---------HSFB2a(1)               --------->HSFB2a(1)                                                      --------->MYB52(2)               --------->HSFC1(2)                                                       <---------MYB46(3)               --------->KAN4(1)                                                      <---------MYB52(1)       <-----------TGA1                                                             <---------ANAC58       <-----------HVH21                                                            <---------ANAC46   --------->GLK1(1)                                                          <---------YAB1 ---->ZAT14    <---------KAN4(1)                                             ------->TEIL -----ZAT14   <---------KAN4(2)                                  <---------AHL20(2) <---------ANAC58 -->bZIP60(2) ------->TEIL               <------------------------ANAC81  <---------ANAC55(2)      <- -->ANAC46 --------->ANAC58       <xxxxxxxxxxxxxxxxxxxxsmallRNA(le3)      <---------ANAC58 <--------- -ALFIN1   --------->ANAC58      <xxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)      <---------ANAC58---------->ID1 >AtMYB61  <---------MYB52(2)    <xxxxxxxxxxxxxxxxxxxxsmallRNA(le3)       --------->ANAC55(2) <------   cactgatatcgtcacgaacattcttagactcgttttttttttttttttttttttgactcgtttctatttaagtgtaacgtatcattccgtttgtttcttt  2768300                            ------>MYB46(1)                       <-----------GT1                   --------->AHL20(2)                 --------->ARR11(3)                                                              ----       <---------AHL20(2)   ------>MYB83                                                  --------->TOE2(3)  <---------YAB1 <---------ARR11(3)                                                 --------->AHL20(2) ---------DOF2 <---------TOE2(3)                                                    <---------AHL20(2) --GT1--------->AHL20(2)  <---------MYB59                                   <-----------GT1     ----- ----DOF2      ----------->ARR10---------->DOF2                 --------->AHL20(2) --------->AHL20(2)   tcttttgatttaatgctaagattttataccaaataaaagtttacagagtaatctagcaagaacaaattaaaacttatttaacaaatttaaaaacttaaaa  2768400                                                                                         <---------AHL20(2)                                                                                     <---------AHL20(2)          <---------AHL20(2)                                                        <---------ARR11(3)          --------->AHL20(2)                                                        <---------AHL20(2)          <---------AHL20(1)                                                        --------->ARR11(3)          --------->AHL20(1)                                                        --------->AHL20(2)      >>>>>>>>>GT-1                                                     --------->AHL20(2)   <------MYB46(1)                <---------AHL20(2)              ----------->GT1   <---------AHL20(1)   ----------->GT1     <---------YAB1                         <---------AHL20(2)    --------->AHL20(1)   <------MYB83     <---------AHL20(2)                       --------->AHL20(2)    --------->AHL20(2)  --------->MYB59<---------AHL20(1)                      <---------AHL20(2)  --------->YAB1 ----->DAG2      --------->AHL20(1)          <----------DOF2 <---------AHL20(2)<---------YAB1  <----- ----->DOF2  <---------AHL20(2) <---------AHL20(2)       --------->AHL20(2)  ----------->GT1   ------   aagtttggttaatattttatatattatcagttatattttttggcatactttcaatttgataaattaaatagtgaataaatgataaatatatttagttaga  2768500  Previous    Next  AGI:  At4g05470.1    Description:  F-box family protein (FBL21). Identical to Putative F-box protein At4g05480 [Arabidopsis Thaliana] (GB:Q9M0U7); similar to F-box family protein (FBL22) [Arabidopsis thaliana] (TAIR:AT4G05490.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN82327.1); contains InterPro domain Leucine-rich repeat 2 (InterPro:IPR013101); contains InterPro domain Cyclin-like F-box (InterPro:IPR001810); contains InterPro domain Leucine-rich repeat, cysteine-containing subtype (InterPro:IPR006553) Range:  from: 2763253    to: 2767954    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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