Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                        --------->WRKY12                                                                      ----------->HVH21                                                                    <---------O2                                                                    <---------TGA1a            <-----                                                        <-----------HVH21                    --------                                           <---------WRKY18(1)      --------->O2 --------->TOE2(3) <-                                          --------->WRKY38(1)       --------->TGA1a    --------->YAB1                                          --------->WRKY12        <---------ALFIN1------>ZmHOX2a(1)<-           <---------ZAT18              --------->TOE1(3)       <---------ALFIN1<-----------------AGL1 <---------ALFIN1   <---------ALFIN1    --------->TOE2(3)----------->HVH21      <-----------------AG -ZAT18    --------->ZAT18     ------>ZmHOX2a(1)       --------->ALFIN1<---------WRKY18(1)   <-------   tccccatctcaagcgcattcccatactcccatcctctacaaaccttgaccaataccagtgtgacctccacacttgacccatctcctcaatcggaatacct  2714400                  <---------AHL20(2)                <----------DOF2             --------->GLK1(2)             --------->ARR11(3)          --------->ANAC58                                <---------ARR14(2)      ------>NtERF2                        ----------->GT1--------->AGP1      --------->LBD16                     <---------TOE2(3)     --------->ANAC46                    <---------At5g28300------>ZmHOX2a(2)     <---------ETT(1)         --------->GLK1(1)           <---------AGP1    <---------LBD16          <---------ARR14(2)           --------->ARR14(2)           <-----------GT1 ----DAG2 --------->ANAC58--------->ETT(1)<---------TOE1(3)<------ZmHOX2a(2)        --------->YAB1 <- ->ARR11(3)  <---------ARR11(3)         <-----------GT1   --------->ARR11(3)      <-----------TBP<--- --------ANAC58 --------->TOE2(3)     --------->CCA1(2)  <---------CCA1(2)  --------->WOX13(1)  <---- --------ANAC58XXXXXXXXXXXXXXXXXXXX>MIR841B*           --------->ETT(1)   <---------ATHB12    <------ --ARR11(3) <---------GLK1(2)--------->ARR14(2)      <-----------HVH21    ------------>CBF   <-------   ttcgtctccggcaagaatctttaatgggtcggatttgtagatttacggtttaatgggtcggatctagatagttttaatcaatctttttataacattaccg  2714500                                                                                      --------->YAB1                                                                                      --------->AHL20(2)                                                                                     <---------ATHB12                                                                           ==========================                                                                           <---------O2                                                                           --------->ANAC46                                                                           --------->bZIP60(2)                                                                           --------->ANAC55(2)                                                                           --------->ANAC55(1)                                                                           <---------ANAC55(2)                                --------->ARR11(3)          <---------WOX13(1)   ------------>CBF                                <---------GLK1(2)          <------------CBF--------->O2<---------AHL20(2) --------MYB46(3)             ----------->ARR10           --------->ATHB12 --------->TGA1a ------MYB52(1)   --------->ARR14(2)        <---------AHL20(2)             --------->ANAC58       --- ---GAMYB         --------->ARR11(3)   <---------YAB1    <---------YAB1    --------->ANAC58       --- ---TOE2(3)       <---------ARR14(2) --------->YAB1    ==============================bZIP_DOF  ------ --At5g28300    <---------KAN4(2)   --------->ICU4     <----------DOF2     <---------TGA1a    <------   ttggataatataagtaagaatatactgtagcatagatactgatgattttatgtgaggctttcattgacttaagagccacgtaacccaataaaaatgggtc  2714600                                                         <---------ZAT18                                                      <---------ANAC58                                              ------>MYB83    <---------ARR11(3)    ---------->DOF2                           ------>MYB46(1) --------->ARR11(3) ==============bZIP_DOF                <---------AHL20(2)--------->ZAT18         <---------DAG2 ------>ANAC58                    --------->ARR11(3)  <---------ANAC58       <---------ATHB12 ------>ANAC58                    <---------ARR11(3)  <---------ANAC46     --------->WOX13(1) --->WRKY18(1)                   --------->YAB1 --------->GLK1(2)<----------DOF2 <----------DOF2 -----HVH21 <-------TEIL       <---------WOX13(1)     --------->YAB1     ------------>CBF   aagcccaaatgcggttcatttgatatgtgaatgaatgatattaaaaccaaattctatcgtgaactatctttacaaaacaatcactttctctctcgctctc  2714700                                                                                         <-------TEIL                                                                                      <---------MYB46(3)                                                                                      <------MYB83                                                                                     --------->ALFIN1                                                                                     <---------DEAR3(1)                                                                                     <---------AtMYB61                                                                              --------->GLK1(2)                                                                              <---------ARR14(2)                                  <---------ARR11(3)                         <---------GLK1(2)                                  --------->ARR11(3)                         --------->ARR14(2)                   --------->ATHB12 ------>ZmHOX2a(2)                        <---------ARR14(2)   ---    <---------ANAC58          <------------CBF                             ----------->ARR10  <------    <---------ANAC58--------->TOE2(3)          <------------CBF      <---------AtMYB61<------MYB46(1)   tctgtttcttgactctcttcttcattagtctccattgatcttgaaacaccattgatagagtcatgaagtttgtggtcgagattctgggtggttcatcgtt  2714800                                                              ------->MYC3                                                              <-------MYC3                                                             --------->O2                      <-------TEIL               --------->HSFB2a(2)                              <--                     --------->CCA1(2)         <------ZmHOX2a(2)                                -----                    <---------ARR14(2)        <---------ARR14(2)                              <------              --------->ZAT18                 --------->ARR11(3)               <---------MYB52(2)----             --------->ANAC58      --------->WRKY18(1)   <-----------------PIF3(1)           --------             --------->ANAC58   <---------ZAT6<---------ARR11(3)  <-----------------AGL1     -------- ------>HSFB2a(2)   --------->ARR14(2)        --------->ARR14(2)<-----------HVH21            <------- ---SPL7--------->ALFIN1      --------->MYB52(2) <---------HSFB2a(2) <---------TOE1(2)       --------   cgagattgaagtggaacgcacagatacattgttagtggtcaaacagaagatcgagaagtctcaacgtgtcccagtttcgaaacaaacccttatcgtcgac  2714900                                                                                        ------->TEIL                                                                                     --------->DOF5.7(2)                                                                                     ----------->HVH21                                                                                   ==================                                                                                   --------->bZIP60(1)                                                                                   <---------bZIP60(1)                                                                                   <---------bZIP60(2)                                                    <---------GLK1(2)              <---------ANAC58                           --------->TOE2(3)        --------->ARR14(2)             --------->TGA1a                    <------ZmHOX2a(2)            --------->LBD16                   <---------ANAC55(1)                   --------->ARR14(2)       ------>ZmHOX2a(2)                      <---------ANAC58                   <-----------ARR10       <------ZmHOX2a(2)                       <---------ANAC55(2)                   <---------ARR14(2)     --------->ARR11(3)                       <---------ANAC46                   --------->ARR11(3)     --------->AGP1                           <---------O2    <---------YAB1 <---------AGP1         <---------ARR11(3)                       --------->O2   --------->AHL20(2)------>ZmHOX2a(2)    --------->ARR14(2)                       <---------TGA1a ----NtERF2        <---------ARR14(3)     <---------ARR14(3)                     <---------TGA2(2) ---->ANAC46       --------->ARR14(3)     <---------GLK1(2)                     ------>ZmHOX2a(1) ---ATERF1(1)      <---------ARR11(3)     <---------ARR14(2)                    ----------->TGA1 -->NtERF2       ----------->ARR10        <---------AGP1                        ===================== --->HVH21   --------->HSFB2a(2)          <-----------ARR10                     ----------->HVH21 ->DEAR3(1)  <---------HSFB2a(2)          --------->ARR14(3)                  ----------->RAV1(2) --DEAR3(1)  --------->HSFC1(1)          <---------CCA1(2)                    --------->At4g35610 ->ETT(2)    <---------HSFC1(1)  --------->AtMYB61--------->ANAC46            <---------At4g35610   ggcatttttattcttcgagaagatcttaacctcgaccaatgccagatcttccacgattctcaaatccaactcgaagtctctcctgacgtgaaccctattc  2715000                   --------->LBD16                  --------->ANAC58                 <---------GLK1(1)                  --------->ANAC46                 --------->GLK1(1)                  --------->ANAC58                >>>>>>>>>>GATA-1                 <---------LBD16              --------->LBD16                    --------->ARR14(2)              --------->ARR14(2)             <---------ANAC46            --------->LBD16              <---------ARR14(2)             --------->DEAR3(1)         <---------ANAC58          ==================================HOX2a_HOX2a                 <---------ANAC58          ===          <------ZmHOX2a(2)               <---------ALFIN1          <----------DOF2       -----------     ------->GAMYB--------->LBD16        --------->ZAT2 <-------GAMYB  <---------LBD16  <----------DOF2 ============MYC_MYB                     <---------ZAT2 --------->At4g35610      <---------ARR14(2) ================HOX2a_HOX2a         ------>ZmHOX2a(1)  <---------At4g35610     --------->ATHB12  <--   acaacaacgacgatcaaatcccgcaaacagagcaatctcctccagcaccgtggatttcagttgaagagtactttgcggagcaagattggcctttgacaga  2715100                 <---------At5g28300                                                      <----------              --------->CCA1(2)           --------->ANAC58                               --------->DREB2C(2)             <---------ARR11(3)           --------->ANAC58                               --------->DEAR3(1)     <------ZmHOX2a(2)                    --------->ANAC46                            <---------ALFIN1   <---------GLK1(1)                   ------->GAMYB            <-------TEIL    --------->ARR14(2) ===========HOX2a_HOX2a     ----------->RAV1(2)               --------->ARR14(2)<---------GLK1(2) >HVH21      --------->ARR11(3)      --------->ANAC58    <-------TEIL           <---------ARR14(2) ----ZmHOX2a(1) <-----------GT1      --------->ANAC58   --------->CCA1(2)      <------ZmHOX2a(1)   ggaagagatcagaaagatttacagttatcggcctgagacaacccaagacatcagtaagattcaagatgcgcatcaaacagaggaatctccaccgtcaaac  2715200               <---------DOF5.7(2)             --------->DOF5.7(2)             <---------MYB52(1)            <-------GAMYB<---------GLK1(2)           ----------->GT1 <-------TEIL   ---------->DOF2       --------->ARR11(1)                            ------>NtERF2  <---------WRKY12       --------->ARR14(2)<---------ANAC58   <------ZmHOX2a(2)              --------  <---------WRKY38(1)    <---------ARR14(2)<---------ANAC58 ------->GAMYB      --------->ANAC58 -HVH21 ------------>MYB.PH3(1)            <---------ANAC46--------->MYB46(3)  --------->ANAC58   ---   tcagtcaaagagaccgttaacattcaagattcgtctgtgaagtttgcgagtaagaacaacaacgatcaagtgcctccaacgaagcaatttccacagtcaa  2715300  Previous    Next  AGI:  At4g05310.1    Description:  ubiquitin family protein. similar to ubiquitin family protein [Arabidopsis thaliana] (TAIR:AT4G05270.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN76119.1); contains InterPro domain Ubiquitin; (InterPro:IPR000626) Range:  from: 2714763    to: 2716010    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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