Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                   <---------AHL20(2)                                                                                <---------AHL20(2)                                          --------->GLK1(1)              <---------ARR11(3)                                       <---------YAB1                    --------->ARR11(3)                                    --------->GLK1(2)              <---------ANAC55(2)         ------                              <------NtERF2                        --------->ANAC58           -------                              --------->At4g35610                  --------->ANAC58           <------ ----->LBD16       --------------->AGL15  <---------GLK1(1)    <-----------HVH21--------->AHL20(2) -->ZmHOX2a(1)     ================================================================================== -----LBD16    --------->MYB46(3) --------->KAN4(1) <---------YAB1 ----------->GT1  <---------YAB1   tggagaacaatattctaacaacttgttttggcagcaatattctgatttctgagtataatttgattcgtcaagtaaaatctaattttataattctcaacaa  2572200                                            --------->ANAC55(2)                                            <---------ANAC58                                            <---------ANAC58                                            <---------ANAC55(1)                                     <                                            <---------ANAC55(2)                                     <                                 <-----------TGA1                                                  --                                --------->bZIP60(1)                                                --                                --------->TGA2(1)                     ---------->DOF2              <-                                <---------TGA2(1)         ---------->DOF2                       ----- ->GAMYB         --------------->AGL15      <---------ANAC46      <---------ETT(2)            <------ -->MYB46(3)     <---------------AGL15     <-----------------------TaNAC69(2)                -------- ---MYB52(2) <---------GLK1(1)  <---------bZIP60(1)      <---------AHL20(2)    --------->AHL20(2) --- ================================MADS_MADS <---------TOE2(3)      --------->ETT(2)  <-------TEIL-----   acaaactcgaatttgatttctctaatgtgtaatgtcgtcacgatttacgtataacatattaaaagttgtcgacaaagaaaatgaaatacatttccaccaa  2572300     <---------ANAC55(2)     --------->ANAC55(2)     ----------->GT1    <---------ICU4                                   <---------YAB1   --------->ICU4                     ------>ZmHOX2a(2) --------->YAB1                      <------ZmHOX2a(2) ---------YAB1                      --------->ARR14(2) ---------AHL20(2)                  <---------ARR11(3)                       <-----------GT1 ------->AHL20(1)               =============HOX2a_HOX2a                    <---------AHL20(2) ------->AHL20(2)               <------ZmHOX2a(1)------>NtERF2              --------->AHL20(2) --------AHL20(1)     <---------ARR14(2)        --------->RAP2.6(2)     --------->AHL20(2) ->MYB83<-----------GT1 <-------TEIL--------->ARR11(3)            --------->ANAC58 ---MYB111(1)         --------->ARR14(2)  <---------ANAC58        --------->ANAC58 ->ANAC46             <---------GLK1(2)   <---------ANAC58        --------->ANAC55(2)   <----------DOF2 ------>YAB1         --------->At4g35610  <---------ANAC46   ----------->HVH21      <---------ZAT14 ->MYB46(1)      <-----------HVH21  <---------ARR14(2) <---------GLK1(2)<---------AHL20(2)   atataataagtaacaacatggtcagattcagagaggacgatctggcttggccaccaagattgtttgacaagtatttatttaactactatactttctcttc  2572400                                       --------->ANAC58                                       --------->bZIP60(1)                                    ----------->HVH21                                    ----------->TGA1                                  <---------ANAC58                                  <---------ANAC55(2)                <---------AHL20(2)<---------ANAC58             <---------AHL20(1)               <----          <---------TOE2(3)       --------->ANAC46             --------->ARR11(3)              ------         <---------ICU4           <---------ANAC55(1)          <---------ARR11(3)              ------         --------->YAB1           --------->ANAC55(2)          --------->AHL20(2)             -------      --------->YAB1        <---------YAB1                     <---------AHL20(2)           ---------    --------->AHL20(2)    <--------HAHB4                       --------->AHL20(1)          --------->ANAC58    <---------YAB1        --------->ATHB51                    --------->AHL20(2)           --------->ANAC58    <---------AHL20(2)    <---------ICU4          <---------AGP1    <-----------GT1 <---------GLK1(2)   --------->YAB1        --------->ICU4<---------bZIP60(1)--------->AHL20(2)   --------->AHL20(2)<---   --------->TOE2(3)     <---------YAB1--------->ANAC58   <---------AHL20(2)   <---------AHL20(2)----   cacaatattaataatgttttaaatgtcattattaatacgtgacgaaactgtagctctgaaataaatatattaacaaaacaaataaatattctcaaccaat  2572500                                                                      <---------WRKY38(1)                                                                      <---------WRKY12                                                                      <---------WRKY45                                                                     --------->WRKY18(1)                                                                    <-----------HVH21                                                                 ------->MYC2                                                                 <-------MYC2                                                                 ------->MYC3                                                                 <-------MYC3                                                                 <-------PIF5                                                                 ------->PIF5                                                                 ------->MYC4                                                                 <-------MYC4                                                                --------->O2                                                                <---------TGA1a                                                                --------->TGA1a                                                                --------->bZIP60(2)                                                                <---------ANAC46                                                                --------->PIF3(3)                                                                <---------O2                                                                ==================MYC_MYB        --------->ARR14(2)                                   ---------------->PIF3(2)     --------->TOE2(1)                                     --------->ANAC58     --------->TOE1(1)           --------->AHL20(1)        --------->ANAC46     --------->TOE1(2) -----ATHB12                     <---------AHL20(2)        --------->ANAC58     --------->TOE2(2) >MYB83 <---------ARR14(2)       --------->AHL20(2)    --------->ANAC55(1)--------->AtMYB61 >MYB46(1)                       <---------AHL20(1)    --------->ANAC58   ------->GAMYB -->WOX13(1)                    --------->AHL20(2)     --------->ANAC46  --------->MYB46(3) >MYB46(3)                 <---------AHL20(2)          --------->ANAC58--------->WOX13(1) ------ICU4                --------->AHL20(2)   ==========================bZIP_DOF ----->YAB1         <-----------GT1             <----------DOF2 <---------PIF3(3)         --------->ZAT6   cataacctcgtatttgtttttgtttccatttaaattttattttgactcgacttttacacgcatgccacgtggtcaaccaaaacgtatgacaaactctact  2572600                                   ------>ZmHOX2a(2)                                   =========================HOX2a_HOX2a                                   ======================HOX2a_HOX2a                                  <<<<<<<<<GATA-2                                  <<<<<<<<<GATA-3                                  <<<<<<<<<GATA-4                                  <<<<<<<<<GATA-1                                  ==========================HOX2a_HOX2a                                  <---------GLK1(1)                                  <------ZmHOX2a(2)                                  =======================HOX2a_HOX2a                    ------>ZmHOX2a(1)                    =====================HOX2a_HOX2a                   *TSS          --------->ARR11(3)             --------->YAB1      <---------ARR11(3)             <---------ICU4      <---------AGP1            <---------ATHB12    <---------CCA1(2)                                  <----------DOF2        ------------>CBF      <---------HSFB2a(2)                                 <---------ANAC58     <-----------TGA1         --------->HSFB2a(2)                            <---------ANAC58     <-----------HVH21   <------NtERF2                      <---------AHL20(2)    <---------ANAC58    --------->ANAC46======================HOX2a_HOX2a------>ZmHOX2a(1)       <---------ANAC58    --------->DEAR3(1)  --------->PCF2              --------->TOE2(3)  --------->LBD16    --------->DREB2C(2)--------->PCF5             ------>ZmHOX2a(1)   <-----------RAV1(2) <---------ANAC46 <---------ALFIN1 ----------->RAV1(2)       <----------DOF2 --------->AHL20(2)   ---------->ID1   tctccaccgtcacaatcatctcctggccccctctagatctctctctcttttcctccttagattaaaatttctccaggtttcttggcgttactgtgtgaaa  2572700                                                                                    <----------DOF2                                                                               ---------->DOF2     --                                                                         --------->GLK1(2)   ========                                                                        --------->ARR14(2)   <------ZmHOX2a(2)            <<<<<<<<<TBF1                                               <---------GLK1(2)    ========         <<<<<<<<<TBF1                                                ----------->ARR10     <--------      <<<<<<<<<TBF1                                                --------->HSFB2a(2)      ---------   <<<<<<<<<TBF1                                                   <---------HSFB2a(2)  ---------->DOF2   aattcttcttcttcttcttctcagcgattgaatcgaaccaagagcgaaaatgagaaatttcagtgtcttcgagagattctctaaagcttttaaagatcat  2572800            --------->ARR14(2)            <---------ARR14(2)            <---------GLK1(2)      <---------ARR11(3)             <---------At4g35610 ---->ZmHOX2a(1)                   --------->ARR11(3)             --------->At4g35610      <--------- =====HOX2a_HOX2a    <---------ATERF1(1)                        <---------CCA1(2)<---------ANAC58 =================HOX2a_HOX2a  <------ZmHOX2a(2)             <---------HSFB2a(2) <---------ANAC58   < -ARR11(3) ===========================HOX2a_HOX2a         --------->GLK1(2)    <-----------GT1<------ >ARR11(3) <------ZmHOX2a(1)  <-----------HVH21          <---------GLK1(2)<---------MYB52(1)<-------GAMYB   ccttctctcaccaggattctcgtcgtctccacgatcaggtcttcatcttcttcaaaaacgattctcgtagctctctgtttttttcttgtttctctgttgt  2572900                            --------->SPL7                          <---------SPL7                          --------->TOE2(2)                                                     <----                        <---------------AtSPL8                                                -------                        --------------->AtSPL3                                             --------->ANAC55(2)                        <-----------------------TaNAC69(2)                  <---------TOE2(3)--------                        <---------------AtSPL3                           <----------DOF2   --------->ANAC46                  <---------LBD16              --------->LBD16        --------->GLK1(2)    --------->ANAC58 --RAV1(1)       ----------->RAV1(2)          --------->LBD16        <---------GLK1(2)     <---------ANAC55(2) -----------GT1 -------->P--------->TOE1(2)  <---------LBD16       ----------->ARR10       --------->ANAC58 ---MYB46(3) <---------------AGL15     <---------GLK1(2)   <-----------RAV1(1)             --------->ANAC55(1)   tgaaacctttcaattctctacctggaaacgtacgaacaacaaattctccagggaaaactatctgttgaatagattctttaggttgtatcatttacgcaac  2573000      ----------->GT1   <----------DOF2                                                             --------->At4g35610  <---------ANAC58 --------->ARR14(2)                                          ----------->RAV1(2)  <---------ANAC58 ------->TEIL                                              --------->YAB1 -----ALFIN1      <---------GLK1(2)                       <---------YAB1    <---------ATHB12        < ---->RAV1(1)   <---------YAB1        <------ZmHOX2a(1)--------->GLK1(2)  --------->WOX13(1)     <--- ->ANAC46 <---------AHL20(2)       <---------LBD16 --------->YAB1    ------->TEIL                <---   acttgcttttgttaaattctgaatctcccagtttatttcaggaagaacgcgtttcataatctgattcgatgaaactcaatcatctggattttgcaaattt  2573100  Previous    Next  AGI:  At4g05018.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G21500.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO16605.1) Range:  from: 2571411    to: 2572175    Orientation: Forward Links:  TAIR  MIPS    AGI:  At4g05020.1    Description:  NDB2 (NAD(P)H DEHYDROGENASE B2); disulfide oxidoreductase. similar to NDB3, NADH dehydrogenase [Arabidopsis thaliana] (TAIR:AT4G21490.1); similar to NDB1 (NAD(P)H DEHYDROGENASE B1), NADH dehydrogenase/ disulfide oxidoreductase [Arabidopsis thaliana] (TAIR:AT4G28220.1); similar to NDB4 (NAD(P)H DEHYDROGENASE B4), NADH dehydrogenase [Arabidopsis thaliana] (TAIR:AT2G20800.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN66469.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO16606.1); similar to FAD-dependent pyridine nucleotide-disulphide oxidoreductase; Calcium-binding EF-hand [Medicago truncatula] (GB:ABD32606.1); cont Range:  from: 2572619    to: 2576593    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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