Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                    <---------ARR11(3)                                                                                --------->ANAC58                                                                                --------->ANAC58                                                                               <---------TOE1(2)                                                                          <-----------HVH21                                                                         <-----------RAV1(1)                                                                         --------->ALFIN1                                                                        <-------MYC4                                                                        <-------MYC3                                                                        ------->MYC2                                                                        <-------MYC2                                                                        ------->MYC3                                                                        <-------PIF5                        --------->ANAC46                                ------->MYC4                        --------->ANAC58                                ------->PIF5                   <---------ZAT14                                     <---------TGA1a                   <---------ZAT18                                <---------ARR14(2)          <---------ICU4--------->ANAC58                          --------->ARR14(2)  <---------YAB1         <---------ATHB12 --------->WRKY18(1)           <---------At5g28300  <---------SPL7 ------>GAMYB --------->ZAT18                      <-----------ARR10   <---------O2<---------YAB1 ------->ANAC46    --------->ZAT14                 <---------ARR11(3)  --------->O2<------ZmHOX2a(2) -------LBD16 --------->ZAT14                      --------->GLK1(2)   --------->TGA1a--------->ICU4 ----->MYB52(1)  --------->ANAC46   ------>ZmHOX2a(1)  <-----------GT1 --------->ANAC55(2)--------->YAB1 --------GT1  <---------ZAT14    ------>MYB83<-----------GT1      <---------ARR11(3)--------->YAB1 ----AHL20(2) <---------ZAT18    ------>MYB46(1)   --------->ARR11(3)  --------->ANAC46<---------ICU4   aacggaatccaatgagtacactgcacaagtcaaccttcctcactaagttacaaaatcttaccgttcaatatccacgtgtcgcacgatcataatcaaaaca  2567100                                                                                  --------->ZAT6                                                                                ----------->RAV1(1)                                                                               --------->ANAC58                                                                               --------->ANAC58                           <---------YAB1                                      <---------ETT(1)                         --------->ANAC55(2)      ---------->DOF2              --------->ANAC46                       <-----------GT1 --------->ZAT14               ----------->GT1              ---                <----------DOF2        <---------ZAT14             <---------ANAC58               ---               ------>ZmHOX2a(2)     --------->ANAC46              <---------ANAC46               ---             --------->ARR11(3)      --------->bZIP60(2)          <-----------------------TaNAC69(2)             <---------ARR11(3)    <---------ALFIN1        ---------->DOF2 <-----------GT1      -----           <---------MYB52(1)<---------GLK1(2)   <---------AHL20(2)<---------ANAC58       <----------DOF2   caccgattaaaccgtgatctttatttcacatgattctccacttcaccgtatataaagaagaaaaagaagccgtgttaaaacccgacactaccctttttaa  2567200                                                                 <-------MYC3                                                                 ------->MYC3                     ------>MYB46(1)                             <-------MYC2                     ------>MYB83                                <-------PIF5                    --------->ORA47(1)                           ------->PIF5                   --------->DEAR3(1)                            ------->MYC4                   ----------->HVH21                            <---------ANAC55(2)                   --------->DREB2C(2)                          <---------TGA1a                   ------->GAMYB                                --------->ANAC55(2)                   --------->MYB46(3)                           <--------ABF1                  --------->DEAR3(2)                            --------->TGA1a                  --------->SPL7                                --------->O2                  --------->MYB46(3)                            <---------O2                 ------>MYB46(1)                                <---------ANAC46               --------->DREB2C(2)                         --------->ANAC58               <---------MYB55(2)                          --------->ANAC58               ----------->HVH21                           --------->ANAC46               ------->GAMYB                        --------->AHL20(2)     --------->RAP2.6(2)                           <---------ATHB12         <----------DOF2     XXXXXXXXXXXXXXXXXXXX>MIR169B/C               ------>MYB46(1)<-------MYC4          <<<<<<<<<TBF1     XXXXXXXXXXXXXXXXXXXX>MIR169A                 ------>MYB83  =======================bZIP_DOF   --------->At4g35610                         ------------>CBF------>NtERF2<---------DAG2         --   <---------At4g35610      <------ZmHOX2a(2)  --------->MYB46(3)------->MYC2      <-----------GT1---   <---------ZAT2------>MYB83                <-----------GT1  <---------ALFIN1 <--------------------- ------>ANAC58 --------->MYB46(3)       <---------ICU4   --------->MYB52(1)<---------ANAC58       --- ------>ANAC58 --------->DEAR3(1)      <---------YAB1    <-----------GT1   <---------ANAC58  <<<<<<<< ------>ANAC46--------->DEAR3(2)  --------->bZIP60(2)  <---------MYB52(2) <------------------------ANAC81 ----->DOF2--------->MYB46(3)   <---------ALFIN1 --------->WOX13(1)   --------->MYB52(2)  <<<<<<<<<TBF1   aagccagccgaaaacgaccgaccgaccacgatcaccacttcatcatttaaccaatcaaataacgccacgtgttatttgctttttttttcttcttcttctt  2567300             <---------ANAC58     <---------AHL20(2)                                  --------->GLK1(2)    <---------AHL20(1)                    --------->ARR14(2)    --------->AHL20(2)     --------->YAB1 <---------ARR14(2)    <---------AHL20(2)    --------->AHL20(2)            --------->ARR14(2)               <----------DOF2 ---->ZmHOX2a(1)      ------>ZmHOX2a(1)   --------->ARR11(3)                          --------->GLK1(2) ------>TOE2(3)      --------------->AGL15<---------ARR11(3)           ---------->DOF2<---------ARR11(3) ---ANAC81   <---------ANAC58<---------YAB1             <---------ARR14(2)        --------->ANAC46 ------>TOE1(3)      <---------MYB59     <---------CCA1(2)         --------->LBD16--------->ANAC55(2) <TBF1     <-----------GT1<---------AHL20(2)            <---------GLK1(2)--------->MYB52(1)   ccttaattttttttttcttgtttcctaatttataattcatatcaaatcttcagtctcagattctctctccccaaaaaacgattcacataatctttttgtt  2567400                                                                                     <---------WOX13(1)                                                                           <---------ARR14(2)                                         <---------MYB52(1)                --------->ARR14(2)                             <----------DOF2     --------->HSFB2a(2)    <---------ANAC58                  <XXXXXXXXXXXXXXXXXXXXMIR1887   <---------HSFB2a(2)    <---------ANAC46        <---------MYB52(1)   <---------DAG2    --------->At4g35610      <---------ANAC58   ttctacttctgttatcttctcttggattttgctttatacttccattagcttctgaaaattcagtttaagttatggcgtatttgagtgatggatttgaaat  2567500                                                                                                    -                                                                                             --------                                                                                            <--------                                                                                            ---------                                                                              <-----------ARR10     -                                                                             <---------CCA1(2)     --                                                                      --------->ARR14(2)   <---------LBD16               <---------YAB1  <---------TOE2(3)                      <---------ARR14(2)<---------ZAT2       <---------TGA1a         <---------TOE1(3)                     <------ZmHOX2a(1)  --------->ZAT2       --------->TGA1a    <---------ZAT6                         ---------->DOF2        --------->At4g35610       <---------O2      <---------TOE2(3)                     <------ZmHOX2a(1)>>>>>>>>>RAP2.2    <-       --------->O2      <---------TOE1(3)           <------ZmHOX2a(1)<---------GLK1(2) <---------GLK1(1)   gaagtcgactcgtgagtatgagagattagggttagggtttgtgaggtttactagaggattagggaggaaaaggattctcatatctaaacgagctccggaa  2567600          --------->ATERF1(2)          --------->DEAR3(1)          <---------DEAR3(1)         --------->ATERF1(1)         <------NtERF2        --------->ABI4(1)        ------>NtERF2       --------->RAP2.3(3)       --------->DEAR3(1)       <---------DEAR3(1)       --------->ATERF1(2)       <---------ATERF1(2)       --------->RAP2.3(2)      --------->ERF1      --------->RAP2.3(1)      --------->DEAR4(2)                         <------MYB83      --------->ORA47(2)                 <---------ARR14(2)      --------->ATERF1(1)            --------->ANAC58     <---------ATERF1(1)             --------->ANAC58     <---------RAP2.3(1)            <---------LBD16                                       <-------TEIL -------->ATHB12                   --------->MYB52(1)                                <--------P ->LBD16<---------ATERF1(1)      --------->DEAR3(2)                               --------->MYB59 -HSFB2a(2)             --------->ANAC58 --------->ARR14(2)                  <---------CCA1(1) >HSFB2a(2)--------->LBD16   <---------YAB1      <------MYB46(1)             <---------RVE1(1)     -- ------->HAHB4          --------->ANAC46 --------->GLK1(2)                  <---------AHL20(1)   <--- ------->ICU4           --------->ANAC58<---------GLK1(2)                   <---------ARR11(3)<------ --------YAB1           --------->bZIP60(2)    <--------P                   --------->ARR11(3)-------   aatgattcgccgccggtgaagagaccaagtcatgaaacgacggaatcttgtaggtctctgcttgaaactctgcatcaagatattttggtaagttcattta  2567700                                                                   <-------TEIL                                                                  --------->CCA1(2)                                                                 --------->ARR14(2)                 -         <----------DOF2                                         --------->ARR11(1)     =============  <---------AHL20(2)      <---------YAB1                         <---------GLK1(2)<---------ANAC46  - ------->YAB1           --------->YAB1   --------->ARR14(2)      <---------ARR14(2)     <------ZmHOX2a(2) ------YAB1        ------>ZmHOX2a(1)     <---------ARR14(2)    ----------->ARR10  <---------O2    <-- ---AHL20(2)      --------->TOE2(3)  <---------LBD16  ------>ZmHOX2a(2)       <-----------HVH21 <---- -->AHL20(2) <-----------GT1        <---------ANAC46 <---------At4g35610   <----------DOF2     <-----   ttaataaatctcttttttctccttaattgtgattagttttggggatttgattttgatctgataagcagattcgagtactttgtcatgtggatcacgagga  2567800   ----------->RAV1(1)                                              --------->ANAC58 ----->MYB83                                             --------->ARR11(3)       --------->ATHB12 =HOX2a_HOX2a                                            <---------ARR14(3)      <---------YAB1 ----->MYB46(1)   ------->TEIL      --------->GLK1(2)    --------->ARR14(3)      <---------ATHB12 -------MYB59    <---------CCA1(2) --------->DAG2        <---------GLK1(2)       <------ZmHOX2a(2) -------ARR10 ------->MYC3        ---------->DOF2        <---------ARR11(3)   ------>ZmHOX2a(2) -ZmHOX2a(1)  <-------MYC3    --------->YAB1       <-----------GT1  --------->ANAC58            <----   cctagccacactaaaacgtgtatctaaaacaataagaaaagctgtaagttttttttcaagattttgaatcaagaaaatgatcgatcattgaattctttct  2567900                 <---------TOE2(3)               <---------AHL20(2)              <---------AHL20(2)              --------->AHL20(1)              --------->AHL20(2)              <---------AHL20(1)           <--------ATHB1           --------->ATHB51           --------->AHL20(2)           <---------AHL20(2)           <---------ICU4          <---------YAB1                            --------->ANAC55(2)        --------->YAB1                             <---------TOE1(3)       --------->ICU4                   <---------YAB1       <---------ATHB51              <---------AHL20(2)       <---------ATHB12             --------->AHL20(2)  --------->ANAC58            <---------WOX13(1)   --------->MYB59                       <---------ZAT18  --------->ANAC58         <---------YAB1          <---------TOE2(3)              <---------YAB1 -----YAB1--------->ICU4   <---------AHL20(2)<---------AHL20(2) ---------->DOF2<---------YAB1    ----   aattaagcaataataatttaatgttttttttaattgaattttatgattttttttaggtaattgaagcaaagaagtcgcattttgattatagcacacctaa  2568000  Previous    Next  AGI:  At4g05010.1    Description:  F-box family protein. Identical to Putative F-box protein At4g05010 [Arabidopsis Thaliana] (GB:Q9S9T6); similar to F-box family protein [Arabidopsis thaliana] (TAIR:AT4G21510.1); similar to At1g61340 [Medicago truncatula] (GB:ABD32592.1); contains InterPro domain Cyclin-like F-box (InterPro:IPR001810) Range:  from: 2567472    to: 2568160    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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