Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                     ---------->DOF2           <---------ARR11(3)                                                               <--------           <---------GLK1(2)                                                                <--------       --------->ANAC58                                                                     <--------       --------->ANAC58                         <---------ARR14(2)                <---------At4g35610       --------->ANAC46                         --------->ARR14(2)              <-----------RAV1(2) ---->ANAC58     --------------->AGL15     <---------ARR11(3)                   <---------HSFB2a(2) ---->ANAC58     <---------------AGL15     --------->ARR11(3)               <---------MYB46(3) <----- --->DOF2  --------->ARR11(3)   <-------TEIL<------ZmHOX2a(2)             <-------GAMYB<---------YAB1   gcaaatcacacgagattttctcaaagtagatagtttcatcttcaagatcaaatccgatgttgtacatttgaaatacggttgtccagatgatgttaagatt  2549100            --------->YAB1            <---------ICU4    --------->LBD16                                                <------ZmHOX2a(2)   --------->LBD16                                                --------->AGP1   <---------LBD16 --------->At4g35610                          --------->MYB59  <---------LBD16  <---------At4g35610                        <--------P -TOE2(3)  --------->ICU4                                   <---------MYB46(3) -TOE1(3)  <---------YAB1                                   ----------->GT1 -YAB1 <------------------ATHB9                      <---------KAN4(2)      ---------->DOF2--------->HSFB2a(2) ----WOX13(1) <---------YAB1                  <---------MYB46(3)----------->ARR10         --------->REM1(2)   gattcccggggtcatcatcacagctaaacagaaatactcttcttcgatttgttggaataagctggttagatccaaatctaaagagactcccttgtagaat  2549200                         --------->STY1(2)                         <---------ZAT2                 <---------ATHB12                                                             <------            --------->ANAC58                                                                ---------            --------->ANAC58  <---------ANAC46                                      <----------DOF2         <---------SPL7  <---------STY1(2)                              <---------TOE2(3)  <<<<<<<<<WRKY18      <---------At5g28300--------->ZAT2            --------->ZAT6      ---------->DOF2   --------->TOE2(3)     <-----------GT1------->TEIL --------->WRKY12<-----------GT1   --------->ZAT6   <---------DAG2   gtcaatgttaccgtaggcaatgaagctagctcgcgttgaactgttccattgtaacactctagttggccatcactaaagttgtttagcttttcgtcaatga  2549300                                      <---------At4g35610                                       <----                                    <-----------RAV1(2)                                         -----                                    <---------ALFIN1                                        <--------                         <---------SPL7                                                  <---------ANAC58                       --------------->AtSPL3                                            <---------ANAC58                    --------->ZAT18--------->LBD16                       XXXXXXXXXXXXXXXXXXXXXXX>MIR836                  <---------At4g35610 --------->ZAT2                  --------->ATHB12  <---------MYB46(3)   --------->ETT(2) ----------->HVH21 <---------ZAT2                 <---------YAB1 ----------->HVH21 ---ATHB12        --------->At4g35610 --------->At4g35610     <-------MYC3        <----------DOF2  -- >WOX13(1)  <----------DOF2--------->SPL7       <---------YAB1------->MYC3  xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)   agttgtcgatatgacttttgagctcaccgtacgattccccagccgagtttaatattgtggtccatgtgtcgatgattgtgtttcctttgatgggtgtcaa  2549400                                                  <---------ICU4                                                  --------->YAB1                                --------->At4g35610  <-----------GT1         --------->AHL20(2)     <------ZmHOX2a(1)        <---------ICU4     --------->ICU4              <---------AHL20(2)  <--- --------->ICU4               --------->YAB1   --------->YAB1     <---------AHL20(1)    --------->YAB1 -----ANAC55(2)        --------->ZAT6     <---------DDF1          --------->AHL20(1)    <-----------GT1 ---->ANAC55(2)       <---------TOE2(3)  --------->ETT(2)         --------->AHL20(2) <-----------GT1 ---HVH21----------->GT1     <---------ATHB12 <---------YAB1     <---------CCA1(2) --------->AHL20(2) ------->ATHB12      <---------DOF5.7(2) <---------ETT(2)    --------->TOE2(3)     <---------AHL20(2)   gtgattaggaatagttattccattaacgctaatcatctcaaggtcgacatgataatgaccatacctcatatattagaatttatattttaatcacatttta  2549500                                                                         <XXXXXXXXXXXXXXXXXXXXXMIR850                                                                        ----------->GT1                                                                    <---------AHL20(2)                                                                    --------->AHL20(1)                                                                   --------->AHL20(2)                                                                   <---------AHL20(2)                                                                  <---------AHL20(2)                                                              <---------AHL20(2)         <---------ICU4                                       --------->AHL20(2)         --------->ATHB12                                 --------->AHL20(2)        <---------YAB1                                    <---------AHL20(2)        --------->ICU4                                   --------->AHL20(2)      <---------ICU4                          --------->MYB52(1)  --------->AHL20(2)      --------->YAB1                     <-----------GT1 <---------AHL20(2)                      <---     --------->ICU4              ------------>CBF        <---------AHL20(1)                  --------   --------->YAB1             --------->AHL20(2)         --------->AHL20(1)          <---------ARR11(3)  --------->ICU4    --------->ANAC46  --------->YAB1    --------->AHL20(2) --------->YAB1 <---------- ------TOE2(3)    --------->ZAT6<-----------GT1  ----------->GT1  <---------AHL20(1) <---------GLK1(2)   agaaatgataatgattttaaacactaaacaaaataaacaatattaacaaaacagaaaaattaatttaaattattttgttataatctagattttaactcaa  2549600                      <---------AHL20(2)                      --------->ATHB51                      <---------ICU4                      --------->AHL20(2) <---------WOX13(1)                     --------->ICU4     <------------CBF        <---------AHL20(2)      <---------YAB1     <---------ARR11(3)       --------->YAB1                                         --------->AHL20(2)     --------->AHL20(2)   --------->AHL20(2)                                         <---------AHL20(2)     <---------AHL20(1)   <---------AHL20(2)                           <---------ARR11(3)    ----------->TBP  <---------YAB1 --------->YAB1                     --------->ARR11(3)   --------- ------ATHB12      <---------ICU4--------->YAB1                      <---------AHL20(2) <---------AHL20(2) ---->CBF  <---------TOE2(3)<-----------TBP ------------>CBF        --------->AHL20(2)  <---------YAB1 -GT1--------->AHL20(1) <---------YAB1<---------YAB1  --------->AHL20(2)  <----------DOF2  <---------YAB1   tgaactatatattaatgctagtaattatttttttataatcaagattgccaatggcattaattcttatcaaataaatctttaagttatttttttattatca  2549700                                                                           ------>ZmHOX2a(2)                                                                    --------->ICU4                                                      <---------WOX13(1) --------->ARR11(3)                                                   --------->AHL20(2)    <---------ARR11(3)            --------->ARR11(3)                     <---------AHL20(2)   --------->YAB1            --------->AHL20(2)                     <---------AHL20(1)  --------->ICU4            <---------AHL20(1)                     --------->AHL20(1)<---------ICU4            --------->AHL20(1)                 <---------AHL20(2) --------->YAB1            <---------ARR11(3)                 --------->AHL20(2)--------->ICU4           --------->CCA1(2)                 --------->YAB1 --------->ANAC58          --------->ARR11(3)              --------->YAB1    --------->ANAC58                   <----- >YAB1    <---------ARR11(3)         <---------ATHB12<------------CBF--------->YAB1          --------   aatattgatggagatatattagataagaaaatgctagtaatcaagaatattaattaattgataagaaatgataatgatcttaaaaactaaacaaaataaa  2549800                              --------->YAB1                                 -------->HAHB4                            <XXXXXXXXXXXXXXXXXXXXXMIR850                     <---------ICU4                           ----------->GT1                                   --------->ATHB51                       <---------AHL20(2)                                    <---------AHL20(2)                       --------->AHL20(1)                                    --------->YAB1                      <---------AHL20(2)                                     -------->ATHB1                      --------->AHL20(2)                                     <--------HAHB4                     <---------AHL20(1)                                     <---------YAB1                     --------->AHL20(2)                                     --------->ICU4                     <---------AHL20(2)                                     <---------ATHB51                  <---------AHL20(1)                                   --------->YAB1                  <---------AHL20(2)                                --------->YAB1                  --------->AHL20(2)                                -------->HAHB4                  --------->AHL20(1)                               <---------YAB1                 --------->AHL20(2)                               <---------TOE2(3) <---------AHL20(2)              --------->AHL20(2)                      <-----------GT1  ----------->GT1          <---- --------->YAB1  <---------AHL20(2)          <-----------GT1     --------->YAB1<---------YAB1  <----- ------GT1   <---------AHL20(2)         <---------ARR11(3)     <---------AHL20(2)<---------AHL20(2) ->AHL20(2)  --------->AHL20(2)         <---------GLK1(2)----------->GT1  <---------ICU4      -------   caatattaacaaaaaataaataaattattttgttataatctagattttaactcaataaactgtatattaatgatagtaattattattttataatctagat  2549900                              ------>ZmHOX2a(1)                             --------->TOE1(3)                    <---------ARR11(3)                          <---------ARR11(3)                      --------->ARR11(3)                          --------->ARR11(3)                      --------->AHL20(2)                         --------->RVE1(1)                        <---------AHL20(1)         --------->AHL20(2)  --------->TOE2(3)                    --------->AHL20(1) -----WOX13(1)         --------->AHL20(2)                        --------->CCA1(2)                 -- ----GLK1(2)       --------->YAB1                               --------->ARR11(3)              ----- -->ATHB12        <---------YAB1        <---------AHL20(2)      <---------ARR11(3)         <---------ATHB12   tggcattggcattaattcttatcaaaaaaatccttaagttatttttttttatcaaatattgatggagatatattagataagaaaatgttagtaatcaaga  2550000  Previous    Next  AGI:  At4g04985.1    Description:  aspartic-type endopeptidase/ pepsin A. similar to aspartyl protease family [Arabidopsis thaliana] (TAIR:AT4G30040.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN62311.1); contains InterPro domain Peptidase aspartic, catalytic; (InterPro:IPR009007); contains InterPro domain Peptidase A1; (InterPro:IPR001461) Range:  from: 2548993    to: 2549469    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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