Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                     --------->ZAT18                                                                                  ----------->HVH21       --------->ARR11(1)           --------->WOX13(1)                          <---------ANAC55(2)       <---------ARR11(3)          --------->AHL20(2)                           --------->ANAC55(2) < -------GLK1(1)                    <---------AHL20(2)                <---------ANAC46             --- ------>GLK1(1)                 --------->YAB1       <---------At4g35610 --------->HSFB2a(2)      <-- -ANAC46                       <---------ATHB12  --------->TOE2(3)   <---------ANAC58            <--- -AtLEC2--------->CCA1(2)      <---------ATHB51  <----------DOF2     <---------ANAC58 <---------MYB59   atttccaaagatttgatgttccattagaactcaataataaatcagtgtcaactttagctaataaaccagtggcttggagaacaagtgacctaagttcgaa  2524900                                                                                                    <                                                                                                <----                                                                                             --------                                 <---------GLK1(2)                                         --------->ALFIN1                                 --------->ARR14(2)                  --------->ARR14(2)  <---------ANAC58                                 <---------ARR14(2)               --------->HSFB2a(2)    <------MYB46(1)       --------->ZAT18    --------->MYB46(3)                    ------->TEIL--------->CCA1(2)--------       <---------ZAT14  --------->MYB52(1)                      --------->MYB52(1)       <---------ANAC46 ---------YAB1          ----------->RAV1(1)       ---------->DOF2 <---------HSFB2a(2)    <---------ANAC58 ------>YAB1         --------->ANAC58      <---------YAB1   --------------->AtSPL8       <---------ANAC55(1) -------ICU4         --------->ANAC58  <---------GLK1(2)    --------------->AtSPL3    <---------MYB52(1) ------ATHB12     <---------REM1(1)  <---------YAB1 ----------->GT1  <---------ARR14(2)  <------MYB83   tcatgagtgtgtacaagttgatgaagcaacagatggattctgattctgattcaaaagaaaaaaacgtaccagaaccagagatgagaccattaggtgtgac  2525000                                                                                                 ----                                                                                                 <---                                                                                                -----                                                                                                >>>>>                                                                                                >>>>>                                                                                                >>>>>                                                                                                -----                                                                                                >>>>>                                                                                                -----                                                                                                -----                          <---------ICU4                                                        -----                          --------->YAB1                                                        -----                         <---------YAB1                                                         -----                        <---------ARR11(3)                                                      -----              --------->CCA1(2)                                           --------->MYB52(1)    -----              <------ZmHOX2a(2)                                    ------->GAMYB                >>>>>              =========================HOX2a_HOX2a                --------->MYB46(3)            >>>>>             --------->ARR14(2)                                  --------->ANAC58               -----       <---------ANAC58 --------->ARR11(3)                       --------->ANAC58               -----       <---------ANAC58-------->HAHB4                          <---------MYB111(2)             ------   --------->DOF5.7(2) --------->YAB1                          <---------MYB111(1)             ------ <---------ANAC58      <---------ICU4                   ----------->RAV1(2) --------->ANAC58   ------ <---------ANAC46     <---------YAB1                    =================RAV--------->ANAC58   ------ <---------ANAC58     --------->ICU4              <---------ICU4------->GAMYB------->GAMYB    <------ -------TEIL --------->ARR11(3)               --------->ICU4   --------->MYB46(3)            -------- -----bZIP60(2)     --------->YAB1        <---------ZAT14      <---------MYB52(2)            <------- --->HVH21   --------->AGP1               --------->ZAT14    ----------->RAV1(1)      ---------->DOF2 --->TGA1    <---------ARR14(2) <------ZmHOX2a(1)<---------YAB1<---------MYB55(2)  ----------->GT1<--   gatgcgtttacttgagatccagtaatgatcatgaggaagaagactacacttattattcccctgcaacaaccaaaaacaacggaatcagtaaaacagagcc  2525100         <---------ATERF1(1)         ------>NtERF2        --------->DEAR3(1)        --------->ATERF1(2)        <---------ATERF1(2)        <---------DEAR3(1)       --------->ATERF1(1)       <---------LBD16  <---------ARR14(2)  --------->ARR14(2)  <---------GLK1(2) -->NtERF2<------NtERF2 ------RAP2.6(3) ---->ANAC46 >>>>AtERF-2 >>>>AtERF-1 >>>>AtERF-3 ---->ANAC58 >>>>AtERF-7 ---->DEAR3(1) ---->DREB2C(2) ---->RAP2.6(2) ---->RAP2.3(2) ---->ANAC58 ---->ATERF1(2) ---->RRTF1(3) >>>>AtERF-4 >>>>AtERF-5 ---->RRTF1(2) ---->RAP2.3(3) --->ERF1--------->LBD16                   --------->GLK1(1) --->RAP2.3(1)                         --------->HSFB2a(2) --->RRTF1(1)                          <---------HSFC1(1) --->ATERF1(1)                         <---------HSFB2a(2) ---ATERF1(1)                 ------------>MYB.PH3(1)                                        -------- ->ARR14(2)       --------->At4g35610  --------->HSFC1(1)                               ----------->GT1 --ARR14(2)     --------->YAB1--------->MYB52(1)  <---------ATHB12      <------ZmHOX2a(1)<------ZmHOX2a(1) ----NtERF2   --------->GLK1(2)       <---------ANAC46        ---------->DOF2      >>>>>>>>>TBF1   gccatattcgccggcgaatcagattacagagaaaacggtttcgagaaatcaaatcaaaaacctgtaaagagcgaggagaagcgaagaagaaggagaaaag  2525200                                                      <---------ARR11(1)                         <---                                                      <---------ARR11(3)                         ----                                                      --------->ARR14(2)                        <----            <---------HSFB2a(2)                       <---------ARR14(2)                        <----       <---------ANAC58                               --------->ARR11(3)        --------->AHL20(2)       <---------ANAC58                     <---------ARR11(3)                 --------->ICU4   <----     <---------YAB1                         --------->ARR11(3)      ------>ZmHOX2a(2)       <--------  --------->ICU4                        ---------->DOF2           <---------ARR11(3)       --------->ARR11(3) -->DOF2    --------->HSFB2a(2)    ---------->DOF2   <---------CCA1(2)        *TSS         <---------ARR11(3)   agcaacgatgagtgcgagaagaggcaatagtctccattgaagcaaagttctctccatatctctctcttgatctcttctgcgattatttggagagagcttc  2525300                                                 --------->ARR14(1)                                                 --------->GLK1(2)                            <------ZmHOX2a(1)    --------->CCA1(2)                           --------->ICU4       <---------GLK1(2)                           ------>ZmHOX2a(2)                --------->ATERF1(1) <---------ARR11(3)          --------->ANAC58            <--------          ---------->DOF2 <---------TOE2(3)     <---------ARR14(2)                          <-------- <------------CBF<---------PCF2     <---------GLK1(2)<-------GAMYB    =============================HOX2a_HOX2a ------------AGL15        <---------TOE1(3)     --------->ARR14(2)    <------ZmHOX2a(1)   --------->ARR11(3) ----------->AGL15 --------->ATERF1(1)  <----------DOF2         --------->ANAC46     <-----------HVH21 -------------AGL2<---------ATERF1(1)--------->GLK1(2)   <---------HSFB2a(2)         <-------GAMYB -------------AGL1--------->PCF2    --------->ARR11(3)   --------->HSFB2a(2)     ==================HOX2a_HOX2a -------------AGL3------>NtERF2  <---------TOE2(3)<-------TEIL  --------->ANAC58 <------ZmHOX2a(1)  - -At4g35610   --------->ALFIN1  ---------->DOF2 --------->ARR11(1) <-----------RAV1(2)<---------MYB52(1)   tcttattggctatgaagcggggcctactaaggattaaagattctttaaaagattcggttatagaacaagccaggagtctctaaggaccgttagatcgtgt  2525400                           ----------->ARR10                      <---------AtMYB61                 <---------MYB46(3)                <---------DEAR3(1)              ------------>AtMYB77            <------ZmHOX2a(2)           --------->ARR11(3)           --------->ARR14(2) <---------RVE1(1)    --------->YAB1  <---------MYB46(3)                                             <---------ANAC58 -ANAC58   <---------ARR11(3)<---------ARR11(3)                         ------>ZmHOX2a(1) -ANAC58   <---------ARR14(2)--------->ARR11(3)                    ------>ZmHOX2a(1)    <---------ZAT18 -------->MYB46(3)<-------GAMYB                               <---------GLK1(2)    <---------ANAC58   caacaatcgtgaagatcgacggttgtggtgagatattaagcacaacttggactgtgccagataagattcctctccttcatggtttacttgtgcattcaac  2525500                           --------------->AGL15                           <---------------AGL15                          <---------ANAC58                          <---------ANAC58                                 <-----------RAV1(1)                       ------>ZmHOX2a(1)                               --------->AHL20(2)                      --------->TOE2(3)                                <---------AHL20(2)                 <----------DOF2     <---------AHL20(1)            <---------DAG2               ---------->ID1     ----------->GT1                  <----------DOF2                  <   aagtccaactaagttttgtcttttccttacttgaaatagtatattttgtattcttctatagactgatcactttttaaatgttgtttctgatcacagtaat  2525600              <---------YAB1             <---------AHL20(1)             <---------AHL20(2)           <---------YAB1        <---------YAB1       <----------DOF2      ------>ZmHOX2a(2)     <------ZmHOX2a(2)    <---------AGP1    <---------ARR11(3)    <---------ARR14(2)    <---------ARR11(1)                                                     ------>MYB46(1)    <-----------ARR10                                           <---------ARR11(3)    --------->ARR11(3)                                          --------->ARR11(3)    --------->ARR14(2)                                         --------->YAB1   <---------ARR14(1)                    <---------ZAT18   <---------AHL20(2)                   <----   <---------CCA1(2)                     --------->ZAT18  <---------AHL20(2)                   <-----  <------NtERF2                          <-------TEIL     --------->AHL20(2)      --------->ANAC46  <  --------->LBD16             ------->TEIL         <---------ANAC46        ------>MYB83    ------->GAMYB ---------LBD16            --------->AtLEC2        <---------ANAC55(2)<-----------GT1     <---------MYB52(2)   gggccggatctttattatttttaaggcccatgcacataagaggtccacttattatgtgaattaaatgatattaaaccaaattacccaaaacaactcacct  2525700                         --------->ATHB12                        <------ZmHOX2a(2)                      <----------DOF2                       <---------ARR11(3)                   --------->ANAC58            --------->YAB1                       --------->ARR11(3)                   --------->ANAC58           <---------YAB1                      <------ZmHOX2a(1)                --------------->AtSPL8         --------->ARR11(3)        <---------ATHB12<---------YAB1                 <---------------AtSPL8         <---------ARR11(3)    --------->LBD16 <---------TOE2(3)  <---------AHL20(2)  --------->ZAT18           --------->RVE1(1) ------DOF2    <------ZmHOX2a(1)  <------------MYB.PH3(1)  <---------ZAT18           --------->CCA1(1) ----DAG2    --------->MYB59 --------->YAB1            <---------------AtSPL3--------->YAB1 -----------GT1================HOX2a_HOX2a <---------AHL20(2)  <---------DAG2----------->GT1  <------   tttttccccaatagttaggacttaggatcattgataactgtttattttatagacattttagtacgctttttttttgcaattgtaaaaatatcatattgaa  2525800  Previous    Next  AGI:  At4g04955.1    Description:  ATALN (ARABIDOPSIS ALLANTOINASE); allantoinase/ hydrolase. similar to dihydropyrimidinase / DHPase / dihydropyrimidine amidohydrolase / hydantoinase (PYD2) [Arabidopsis thaliana] (TAIR:AT5G12200.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO40457.1); similar to Dihydroorotase [Medicago truncatula] (GB:ABN08606.1); similar to allantoinase [Robinia pseudoacacia] (GB:AAR29343.1); contains InterPro domain Metal-dependent hydrolase, composite; (InterPro:IPR011059); contains InterPro domain Dihydroorotase region (InterPro:IPR005847); contains InterPro domain Amidohydrolase 1; (InterPro:IPR006680) Range:  from: 2522032    to: 2525278    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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