Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                          <---------ANAC58                                                    <xxxxxxxxxxxxxxxxsmallRNA(s)                                                    xxxxxxxxxxxxxxxx>smallRNA(s)                                                    xxxxxxxxxxxxxxxx>smallRNA(i)                                                   --------->ALFIN1                           <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                           <--------HAHB4          <xxxxxxxxxxxxxxxxsmallRNA(s)                           --------->ATHB51       <xxxxxxxxxxxxxxxxsmallRNA(s)                         <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)            --------->WRKY45                <xxxxxxxxxxxxxxxxxxxxsmallRNA(i2)            --------->WRKY12 <---------YAB1 <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)           <---------WOX13(1)<xxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)          <---------ANAC58--------->ICU4    <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                   <          <---------ANAC58<---------YAB1  xxxxxxxxxxxxxxxx>smallRNA(s)--------->ARR11(3)           <x         <---------MYB46(3)<---------ICU4 xxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)                     xxx     xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                   xxx     --------->ATHB12  <-------TEIL      --------->ANAC46xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)    xxx --------ANAC58       xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)           <---------GLK1(2)          xxxx --------ANAC58  <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)  <---------ANAC58 --------->TOE1(2)   <------- -->HSFB2a(1)    --------->MYB52(1)      xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)               xxxxxxxx ---HSFC1(2)xxxxxxxxxxxxxxxx>smallRNA(i) <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)            xxxxxxxxxxx -->HSFC1(2)--------->WRKY38(1)--------->YAB1 xxxxxxxxxxxxxxxxxxxx>smallRNA(si3)         xxxxxxxxxxxx ---HSFB2a(1)<---------WRKY18(1)       <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)          <-----------GT1x -->At4g35610xxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)<xxxxxxxxxxxxxxxxsmallRNA(i)   --------->AHL20(2)xxx ---At4g35610xxxxxxxxxxxxxxxx>smallRNA(s)--------->REM1(1)            xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)   tccttgctcattggttgaccaagggttcattattaatacttctacaccaagaggtctggggttcgagttttagatactgcgatttattaacaaatttaca  2508700                         ------>ZmHOX2a(2)                        --------->GLK1(1)                        <------ZmHOX2a(2)                       --------->ARR11(3)                 <---------AtLEC2                <xxxxxxxxxxxxxxxxsmallRNA(s)               xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)               xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)            xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)            <xxxxxxxxxxxxxxxxxxxxsmallRNA(se3)            <xxxxxxxxxxxxxxxxsmallRNA(s)            <xxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)           xxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)           xxxxxxxxxxxxxxx>smallRNA(le3)           xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)           xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)           xxxxxxxxxxxxxxxxxx>smallRNA(si3)          xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)         xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)         xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)        <------NtERF2  <---------ARR11(3)   <xxxxxxxxxxxxxxxxxxxxsmallRNA(s2)  <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3) xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                                                <---------ARR11(3) xxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                                        <------ZmHOX2a(2) xxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                                  <xxxxxxxxxxxxxxxxsmallRNA(i) xxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                             --------->ANAC46    --------->ARR11(3) xxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                              --------->ANAC58   <---------At4g35610 xxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                    xxxxxxxxxxxxxxxxxxxxx>smallRNA(s2) ----GT1xxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)       <---------MYB52(1) <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3) xxxxxxxxxxxx>smallRNA(i2)                    xxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)<xxxxxxxxxxxxxxxxxx xxxxxxxxxxxx>smallRNA(si3)      <---------------AtSPL3          --------->ANAC58---------->DOF2 xxxxxxxxxxx>smallRNA(le3)       --------------->AtSPL8   =========================HOX2a_HOX2a xxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)      --------->YAB1  <------ZmHOX2a(1)<---------ARR11(3) xxxxxxxxxxxxxxxxxxxx>smallRNA(le3)      <---------YAB1  --------->ICU4    --------->ARR11(3)  ------   gattaatggaggcaagtgtgcatgagatctctaacaatgtacgattatagccgtttgaaaggattatacgcacagaagatcagtgaagctctccatcaaa  2508800                                  --------->ARR11(3)                                  <---------ARR11(3)                                  --------->ARR14(2)                                  <---------AGP1                                 <---------CCA1(2)                                <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                             <---------ANAC46                             <---------ANAC58                             <---------bZIP60(2)                             <---------ANAC58                            <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                           <-----------HVH21                          xxxxxxxxxxxxxxxx>smallRNA(s)                          <-----------RAV1(1)                         <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                         <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                         <xxxxxxxxxxxxxxxxsmallRNA(i)                        xxxxxxxxxxxxxxxx>smallRNA(i)                      <---------ANAC46                      <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                     --------->ATERF1(1)                     <------NtERF2<---------ARR14(2)                    <---------ATERF1(1)                    xxxxxxxxxxxxxxxx>smallRNA(s)                    xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)                    xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                    xxxxxxxxxxxxxxxx>smallRNA(i)                    <-----------HVH21                   <---------ANAC46                   <---------ANAC58                   <---------DEAR3(1)    xxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                   <---------ANAC58 ------>ZmHOX2a(2)                   xxxxxxxxxxxxxxxx>smallRNA(i)                  <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3) --------->HSFC1(2)                 xxxxxxxxxxxxxxxx>smallRNA(s)           <---------HSFC1(2)                 xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)  --------->HSFB2a(1)              <xxxxxxxxxxxxxxxxsmallRNA(s) <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)            <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)        <---------HSFB2a(1)                 <--------       <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)----------->GT1  <---------AtLEC2             --------->YAB1     xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)xxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)           <---------YAB1 xxxxxsmallRNA(i2)<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)<---------KAN4(2)      --------->ANAC55(2) ---->DOF2 <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3) ---------->DOF2----------->GT1  <-----------GT1 ----   agcatggagaaggaaaatgaggcgtcgtctgtcgtggatctaataagggtcaaaaggaattttccatggtataatcgtttatgtaacagttcttataatt  2508900                                                                                             <-------                                                                                        --------->MYB59                                                                                        --------->MYB52(2)                                                                                        --------->MYB46(2)                                                        ---------->DOF2               <---------MYB52(1)                                                       --------->AHL20(2)    <---------------AGL15          <---------AHL20(2)                        --------->YAB1           --------------->AGL15       --------->YAB1                             --------->AHL20(2)        ----------------->AGL3     xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)        --------->YAB1             <-----------------AGL3<-- -YAB1--------->AHL20(2)                         --------->AHL20(2)         ----------------->AGL2--- ------->GT1         ----------->GT1            <---------ATHB12  ----------->GT1    ------------>MYB.PH3(2)   tgtaacaaataataaatctaatacagaaaaaaaaaaaaaaaaaaaacccaataaaaataaaagaaaaattgaaaaatgactaaatatagttagttaagaa  2509000                                              ------->PIF5                                              ------->MYC4                                              <-------MYC4                                              <-------PIF4                                            ------------>OsbHLH66                                            ------->TEIL                                           <------------OsbHLH66                                          <---------ZAT18                                        ------->PIF5                                        ------->MYC2                                        ------->MYC3                                        <-------MYC3                                        <-------PIF5                                        ------->MYC4                                        <-------PIF4                                        ------->PIF4                                  <-------MYC2<-------PIF5         --------->ATHB12         ------->MYC3<-------MYC3         --------->ATHB51         <-------MYC3------->MYC2        <---------AHL20(2)        ------->MYC2------->PIF4        <---------YAB1         <---------ALFIN1   --------->LBD16           --------->ANAC58 ------->MYC3  --------->LBD16            --------->ANAC58 <-------MYC2 <---------LBD16        ------>ZmHOX2a(1) --------->ZAT18 --TOE2(3)          --------->ARR14(2)  <-------MYC2                                         ------->TEIL -------ARR14(2)    <---------ARR14(2)------->TEIL                                     --------->TOE2(2) ------>ARR14(2)   <---------CCA1(2)<-------TEIL                              <------------CBF <-----   aatcccgcatattattggtttatatcctcgcacacacatgcatgtgcacgtgcaacgtcttctcttctcttctcttccaccattgaaaacctatgcacca  2509100                  --------->AHL20(2)   --------->RVE1(1)                         ----------->GT1                 --------->AHL20(2)   <---------ARR11(3)                         --------->LBD16               <----------DOF2        --------->ARR11(3)                       <---------LBD16-------        --------->ZAT18 <---------YAB1--------->GLK1(2)                    <-----------HVH21  -------     <------------CBF  --------->ARR11(3)                             <-----------HVH21       =======  ------>ZmHOX2a(1)    <---------ARR11(3)            <-----------GT1  --------->LBD16      --------->MYB52(1) ----ALFIN1 <---------ALFIN1   *TSS  <---------GLK1(2)  <----------DOF2  <---------DEAR3(2)----------   tctcctaaattgcaccactttaaattatcttcgaaaccaaaatctctctctcgtttgactttccctctctcccgtcgtttcaccggaaaaaaacaacaga  2509200        <---------O2                                    --------->ARR11(3)        --------->O2                                   --------->GLK1(1)        =======================================bZIP_DOF<---------GLK1(1)        --------->TGA1a                      =======================================bZIP_DOF      --------->MYB52(1)            ---------->DOF2   <---------ARR11(3)     --------->DEAR3(1)      --------->YAB1  --------->TGA1a     ----------->HVH21       --------->ATHB51<---------ANAC58    --------->MYB46(3)       <------------ATHB5       --------->ARR11(3)    --------->DEAR3(2)       <---------ICU4  <---------ANAC46  --------->MYB52(1)         <--------ATHB1  <---------ANAC58                                     --- ---->GT1            --------->MYB46(3)      <---------O2 --------->YAB1                          <-- >GAMYB <---------TGA1a     --------->ICU4 <------ZmHOX2a(1)                      <------ZmHOX2a(1) =================MYC_MYB   <---------ATHB51 <---------TGA1a             ---------->DOF2         <--- ->RAV1(1)        <----------ID1    ===================bZIP_DOF       >>>>>>>>>TBF1 <-----------HVH21   aaaaaaaccgacgggagagaagaacaaacaataatggggaaaggaggacgtgagaagatatcatcaaacgaagaagaaagagaaggagtcatggctacag  2509300                                                   <XXXXXXXXXXXXXXXXXXXXMIR863-3P                                                --------->GLK1(2)                                               <---------GLK1(2)                                               --------->ARR14(2)                                               <---------ARR14(2)                                              <---------At4g35610                                             ----------->ARR10                                           --------->TGA2(2)                                          <-----------HVH21                                         <---------O2                                         --------->TGA1a                                         --------->TGA2(1)                                         --------->ANAC58                                         <---------TGA1a                                         <---------TGA2(1)                                         --------->bZIP60(2)                                         <---------bZIP60(1)                                         --------->bZIP60(1)                                         --------->O2                                         --------->ANAC58     <---------AtMYB61               <------ZmHOX2a(1)<---------ANAC58  =================================================bZIP_DOF                                         -  <----------DOF2                  <XXXXXXXXXXXXXXXXXXXXMIR870                                      < ------>GLK1(1)       ------->TEIL--------->HSFB2a(2) <---------ANAC58                      ------>ZmHOX2a(2) -------GLK1(1)   =================================MYC_MYB <-----------GT1                  ========= ------GLK1(2)    <----------CDC5 <---------HSFB2a(2) <---------ANAC46                  ------>ZmHOX2a(1)   atttcttttggtcttacaccgatgagcctcatgcttcgaggagacgtcagattctgtcttgttaccctcagattagacaactctttggtcctgatccatg  2509400                                       ------>ZmHOX2a(2)                                       ==================================HOX2a_HOX2a                                      <------ZmHOX2a(2)                                      ===================================HOX2a_HOX2a                                     --------->ARR11(3)                                     <---------ARR11(3)                                     <-----------ARR10                                     <---------ARR14(2)                                     <---------AGP1              <---------YAB1         --------->ARR14(2)            <-------TEIL            <---------CCA1(2)             <------ZmHOX2a(1)     ------>ZmHOX2a(1)              <---------ARR14(1)         --------->HSFC1(1)    --------->TOE2(3)            <---------LBD16               <---------HSFB2a(2)          <-------- -------->GLK1(1)                <---------HSFB2a(2)           --------->HSFB2a(2)        ------>ZmHOX2a(1) ----------DOF2    --------------->AtSPL8                      <---------HSFC1(1)      ---------->ID1 ===========HOX2a_HOX2a          --------->HSFB2a(2)<-----------GT1                <----------DOF2   ggctttcctcaaggttcttattctctaccatttttctcggatcttagatcgatatttccatttttctaggacgtctagttttgttctttgtcctcttttt  2509500                                                      <---------AHL20(2)<---------LBD16                                            ------->TEIL    <---------ANAC58                                            --------->GLK1(2)        --------->HSFB2a(1)                                      --------->TOE1(2)     <---------ANAC58                 --------                                     --------->MYB46(3)     <---------ANAC46 --------->GLK1(1)                       --------->HSFB2a(1)  --------->ARR14(2)       <---------HSFC1(2)    ------>ZmHOX2a(1)                      <---------TOE2(2)     <---------ARR14(2)       --------->HSFC1(2)   --------->TOE1(2)                      <---------TOE2(3)--------->MYB52(1)  <---------TOE2(2)<---------ARR14(2)             <---------ANAC55(2)     <---------MYB52(2)    <---------TOE1(2)--------->ARR14(2)------- --DOF2     <-------TEIL    <---------HSFB2a(2)  <---------MYB52(1)  <---------HSFB2a(1) ------>ZmHOX2a(2)   aaaaatgtgtttgatacataaacgaaggttgtcgaagaaacaaacgaatctgttattttcttacgtttagaaatttcggatttgtttttgatcctacaac  2509600  Previous    Next  AGI:  At4g04930.1    Description:  DES-1-LIKE (fatty acid desaturase 1-like); oxidoreductase. similar to unknown [Populus trichocarpa] (GB:ABK93719.1); contains InterPro domain Sphingolipid delta4-desaturase, N-terminal (InterPro:IPR013866); contains InterPro domain Fatty acid desaturase, type 1; (InterPro:IPR005804); contains InterPro domain Fatty acid desaturase, type 1, N-terminal; (InterPro:IPR010257); contains InterPro domain Sphingolipid delta4-desaturase (InterPro:IPR011388) Range:  from: 2509131    to: 2511143    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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